Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055772.1 Olea europaea HOM05D002747 ORTHO05D003069 8.1e-64 247.3 162 100.0
Oeu055771.1 Olea europaea HOM05D002747 ORTHO05D003069 1.1e-47 193.7 139 97.8
SalBow3G1633 Salvia bowleyana HOM05D002747 ORTHO05D003069 1.8e-39 166.4 145 82.1
MSTRG.21971 Avicennia marina HOM05D002747 ORTHO05D003069 6.9e-39 164.5 139 84.9
Migut.N00399 Erythranthe guttata HOM05D002747 ORTHO05D003069 2.6e-38 162.5 139 84.2
unitig_22.g6824 Utricularia gibba HOM05D002747 ORTHO05D003069 3.9e-34 148.7 139 82.0
Cc03_g07950 Coffea canephora HOM05D002747 ORTHO05D003069 1.1e-33 147.1 140 80.0
CAN.G767.5 Capsicum annuum HOM05D002747 ORTHO05D003069 2.0e-33 146.4 141 78.0
Lj3C408G1 Lonicera japonica HOM05D002747 ORTHO05D003069 9.7e-33 144.1 141 79.4
HanXRQChr10g0310071 Helianthus annuus HOM05D002747 ORTHO05D003069 2.2e-32 142.9 139 79.1
Lj3C402G3 Lonicera japonica HOM05D002747 ORTHO05D003069 2.2e-32 142.9 141 78.7
Peaxi162Scf00652g00122 Petunia axillaris HOM05D002747 ORTHO05D003069 2.2e-32 142.9 140 78.6
DCAR_024465 Daucus carota HOM05D002747 ORTHO05D003069 3.1e-31 139.0 141 78.0
Actinidia11421 Actinidia chinensis HOM05D002747 ORTHO05D003069 5.3e-31 138.3 141 78.0
Manes.03G146600 Manihot esculenta HOM05D002747 ORTHO05D003069 5.3e-31 138.3 140 80.0
GSVIVG01020909001 Vitis vinifera HOM05D002747 ORTHO05D003069 5.3e-31 138.3 139 72.7
Atru.chr4.1669 Acer truncatum HOM05D002747 ORTHO05D003069 9.1e-31 137.5 140 77.9
COL.COLO4_20167 Corchorus olitorius HOM05D002747 ORTHO05D003069 9.1e-31 137.5 139 76.3
Lsat_1_v5_gn_1_72020 Lactuca sativa HOM05D002747 ORTHO05D002872 9.1e-31 137.5 141 77.3
Thhalv10007758m.g Eutrema salsugineum HOM05D002747 ORTHO05D003069 1.2e-30 137.1 139 73.4
Solyc12g098420.3 Solanum lycopersicum HOM05D002747 ORTHO05D003069 1.6e-30 136.7 141 75.2
Nitab4.5_0000850g0120 Nicotiana tabacum HOM05D002747 ORTHO05D003069 2.0e-30 136.3 141 76.6
THA.LOC104801025 Tarenaya hassleriana HOM05D002747 ORTHO05D003069 2.0e-30 136.3 139 75.5
BcaC05g24434 Brassica carinata HOM05D002747 ORTHO05D003069 2.6e-30 136.0 151 70.9
CiPaw.01G120100 Carya illinoinensis HOM05D002747 ORTHO05D003069 3.5e-30 135.6 139 75.5
ECA248G3569 Erigeron canadensis HOM05D002747 ORTHO05D003069 3.5e-30 135.6 139 75.5
Actinidia39241 Actinidia chinensis HOM05D002747 ORTHO05D003069 4.5e-30 135.2 141 78.0
Sp1g03690 Schrenkiella parvula HOM05D002747 ORTHO05D003069 4.5e-30 135.2 139 71.2
arahy.Tifrunner.gnm1.ann1.AI5VH5 Arachis hypogaea HOM05D002747 ORTHO05D003069 5.9e-30 134.8 139 76.3
BcaB03g13469 Brassica carinata HOM05D002747 ORTHO05D003069 5.9e-30 134.8 139 71.9
C05p02960 Brassica napus HOM05D001191 ORTHO05D000979 5.9e-30 134.8 141 75.2
BolC5t29084H Brassica oleracea HOM05D002747 ORTHO05D003069 5.9e-30 134.8 141 75.2
Sopen12g033200 Solanum pennellii HOM05D002747 ORTHO05D003069 5.9e-30 134.8 142 73.9
TAR362G0277 Trochodendron aralioides HOM05D002747 ORTHO05D003069 5.9e-30 134.8 141 78.7
BcaB02g06896 Brassica carinata HOM05D002747 ORTHO05D003069 1.3e-29 133.7 139 73.4
PGSC0003DMG401004570 Solanum tuberosum HOM05D002747 ORTHO05D003069 1.3e-29 133.7 142 73.9
Nn1g07916 Nelumbo nucifera HOM05D002747 ORTHO05D003069 1.7e-29 133.3 139 77.7
Nn225s45448 Nelumbo nucifera HOM05D002747 ORTHO05D003069 1.7e-29 133.3 139 77.7
arahy.Tifrunner.gnm1.ann1.12L8KL Arachis hypogaea HOM05D002747 ORTHO05D003069 2.2e-29 132.9 139 75.5
A10p03300 Brassica napus HOM05D002747 ORTHO05D003069 2.2e-29 132.9 141 73.0
Thecc.04G200800 Theobroma cacao HOM05D002747 ORTHO05D003069 2.2e-29 132.9 139 74.1
AT1G04850 Arabidopsis thaliana HOM05D002747 ORTHO05D003069 2.9e-29 132.5 139 74.1
PGR083G0467 Punica granatum HOM05D002747 ORTHO05D003069 2.9e-29 132.5 140 76.4
Carub.0001s0409 Capsella rubella HOM05D002747 ORTHO05D003069 3.8e-29 132.1 139 73.4
Duzib268G0508 Durio zibethinus HOM05D002747 ORTHO05D003069 3.8e-29 132.1 139 73.4
AL1G14570 Arabidopsis lyrata HOM05D002747 ORTHO05D003069 5.0e-29 131.7 139 73.4
BraA10t42604Z Brassica rapa HOM05D002747 ORTHO05D003069 5.0e-29 131.7 141 73.0
RcHm_v2.0_Chr4g0414661 Rosa chinensis HOM05D002747 ORTHO05D003069 5.0e-29 131.7 140 76.4
Sed0019212 Sechium edule HOM05D002747 ORTHO05D003069 5.0e-29 131.7 139 75.5
THA.LOC104826121 Tarenaya hassleriana HOM05D002747 ORTHO05D003069 5.0e-29 131.7 139 74.1
ClCG06G007890 Citrullus lanatus HOM05D002747 ORTHO05D003069 8.5e-29 131.0 139 75.5
CARHR004240 Cardamine hirsuta HOM05D002747 ORTHO05D003069 1.5e-28 130.2 139 73.4
Gorai.005G130000 Gossypium raimondii HOM05D002747 ORTHO05D003069 1.5e-28 130.2 140 74.3
Ca_17967_v3 Cicer arietinum L. HOM05D002747 ORTHO05D003069 1.9e-28 129.8 148 70.3
CsaV3_2G011630 Cucumis sativus L. HOM05D002747 ORTHO05D003069 3.2e-28 129.0 139 74.8
Lalb_Chr13g0294891 Lupinus albus HOM05D002747 ORTHO05D003069 3.2e-28 129.0 148 69.6
Medtr8g085380 Medicago truncatula HOM05D002747 ORTHO05D003069 4.2e-28 128.6 148 69.6
A08p36680 Brassica napus HOM05D002747 ORTHO05D003069 5.5e-28 128.3 141 73.0
BraA08t35571Z Brassica rapa HOM05D002747 ORTHO05D003069 5.5e-28 128.3 141 73.0
MD04G1012000 Malus domestica HOM05D002747 ORTHO05D003069 5.5e-28 128.3 139 74.8
Ciclev10005062m.g Citrus clementina HOM05D002747 ORTHO05D003069 7.2e-28 127.9 139 74.8
BolC8t46958H Brassica oleracea HOM05D002747 ORTHO05D003069 9.4e-28 127.5 140 72.1
Glyma.05G154200 Glycine max HOM05D002747 ORTHO05D003069 9.4e-28 127.5 140 72.9
TPR.G22613 Trifolium pratense HOM05D002747 ORTHO05D003069 9.4e-28 127.5 139 73.4
vmacro15549 Vaccinium macrocarpon HOM05D002747 ORTHO05D003069 9.4e-28 127.5 141 53.9
MELO3C020440.2 Cucumis melo HOM05D002747 ORTHO05D003069 1.2e-27 127.1 139 74.8
PSO170G5398 Papaver somniferum HOM05D002747 ORTHO05D003069 1.2e-27 127.1 139 73.4
Phvul.003G290800 Phaseolus vulgaris HOM05D002747 ORTHO05D003069 1.6e-27 126.7 140 72.9
Psat7g074280 Pisum sativum HOM05D002747 ORTHO05D003069 1.6e-27 126.7 148 68.2
QL06p025333 Quercus lobata HOM05D002747 ORTHO05D003069 1.6e-27 126.7 139 72.7
Lalb_Chr12g0205501 Lupinus albus HOM05D002747 ORTHO05D003069 2.1e-27 126.3 152 69.1
FvH4_4g13780 Fragaria vesca HOM05D002747 ORTHO05D003069 3.6e-27 125.6 140 74.3
FAN12G1649 Fragaria x ananassa HOM05D002747 ORTHO05D003069 3.6e-27 125.6 140 74.3
Glyma.08G112000 Glycine max HOM05D002747 ORTHO05D003069 3.6e-27 125.6 144 71.5
Sabra16G0200100 Salix brachista HOM05D002747 ORTHO05D003069 3.6e-27 125.6 141 51.1
Gohir.A03G094800 Gossypium hirsutum HOM05D002747 ORTHO05D003069 6.1e-27 124.8 140 72.9
Gohir.D02G114300 Gossypium hirsutum HOM05D002747 ORTHO05D003069 6.1e-27 124.8 140 75.0
Hund24396 Selenicereus undatus HOM05D002747 ORTHO05D003069 6.1e-27 124.8 141 71.6
CANSAT78G0345 Cannabis sativa HOM05D002747 ORTHO05D003069 8.0e-27 124.4 139 72.7
Potri.001G316400 Populus trichocarpa HOM05D002747 ORTHO05D003069 8.0e-27 124.4 141 72.3
Aa31LG1G19860 Aethionema arabicum HOM05D002747 ORTHO05D003069 1.0e-26 124.0 152 67.1
C08p01530 Brassica napus HOM05D002747 ORTHO05D003069 1.0e-26 124.0 139 71.2
FAN22G0083 Fragaria x ananassa HOM05D002747 ORTHO05D003069 1.0e-26 124.0 140 73.6
Eucgr.H02771 Eucalyptus grandis HOM05D002747 ORTHO05D003069 1.4e-26 123.6 140 72.1
MD13G1284200 Malus domestica HOM05D002747 ORTHO05D003069 1.4e-26 123.6 139 71.2
TWI53G0635 Tripterygium wilfordii HOM05D002747 ORTHO05D003069 1.4e-26 123.6 140 74.3
PSO357G0187 Papaver somniferum HOM05D002747 ORTHO05D003069 2.3e-26 122.9 141 73.0
Prupe.1G010500 Prunus persica HOM05D002747 ORTHO05D003069 2.3e-26 122.9 139 73.4
Lj4g0002017 Lotus japonicus HOM05D002747 ORTHO05D003069 3.0e-26 122.5 141 73.8
Potri.017G056900 Populus trichocarpa HOM05D002747 ORTHO05D003069 4.0e-26 122.1 140 72.9
Os02g0504500 Oryza sativa ssp. japonica HOM05D002747 ORTHO05D003069 6.7e-26 121.3 139 69.1
BcaC07g36875 Brassica carinata HOM05D002747 ORTHO05D003069 8.8e-26 120.9 139 70.5
Zm00001eb181030 Zea mays HOM05D002747 ORTHO05D003069 8.8e-26 120.9 141 71.6
EL10Ac3g07480 Beta vulgaris HOM05D002747 ORTHO05D003069 1.1e-25 120.6 139 69.1
Hma1.2p1_0187F.1_g082360 Hydrangea macrophylla HOM05D002747 ORTHO05D003069 4.4e-25 118.6 139 71.9
Ah.13g078100 Amaranthus hybridus HOM05D002747 ORTHO05D003069 5.7e-25 118.2 140 70.0
Aqoxy5G00020 Aquilegia oxysepala HOM05D002747 ORTHO05D003069 2.8e-24 115.9 137 68.6
HPP92_021423 Vanilla planifolia HOM05D002747 ORTHO05D003069 2.8e-24 115.9 149 67.1
AUR62018589 Chenopodium quinoa HOM05D002747 ORTHO05D003069 6.3e-24 114.8 139 68.3
Mapoly0009s0066 Marchantia polymorpha HOM05D002747 ORTHO05D003069 2.4e-23 112.8 149 65.8
AUR62020830 Chenopodium quinoa HOM05D002747 ORTHO05D003069 3.1e-23 112.5 139 67.6
CSS0015960 Camellia sinensis var. sinensis HOM05D002747 ORTHO05D003069 3.5e-22 109.0 140 69.3
CDE05G0937 Ceratophyllum demersum HOM05D002747 ORTHO05D003069 7.7e-22 107.8 145 64.8
SEGI_05435 Sequoiadendron giganteum HOM05D002747 ORTHO05D003069 7.7e-22 107.8 142 69.0
ATR0609G128 Amborella trichopoda HOM05D002747 ORTHO05D003069 1.3e-21 107.1 141 68.8
SMO172G0136 Selaginella moellendorffii HOM05D002747 ORTHO05D003069 2.2e-21 106.3 143 64.3
Pp3c2_16680 Physcomitrium patens HOM05D002747 ORTHO05D003069 3.8e-21 105.5 143 66.4
SGA_v2.0_scaffold128G34075 Striga asiatica HOM05D002747 ORTHO05D003069 5.5e-20 101.7 158 43.7
FAN07G2519 Fragaria x ananassa HOM05D002747 ORTHO05D003069 2.1e-19 99.8 127 49.6
CSS0018864 Camellia sinensis var. sinensis HOM05D002747 ORTHO05D003069 3.6e-19 99.0 139 65.5
AagrBONN_evm.TU.Sc2ySwM_117.309 Anthoceros agrestis HOM05D002747 ORTHO05D003069 6.1e-19 98.2 146 59.6
A10p03240 Brassica napus HOM05D004895 ORTHO05D003385 3.0e-18 95.9 147 43.5
SHI00036 Sapria himalayana HOM05D002747 ORTHO05D003069 1.2e-17 94.0 140 40.7
Cfa014907 Carpinus fangiana HOM05D002747 ORTHO05D003069 5.7e-17 91.7 139 44.6
Cpa.g.sc443.2 Carica papaya HOM05D002747 ORTHO05D003069 2.8e-16 89.4 105 77.1
BraA10t42600Z Brassica rapa HOM05D004895 ORTHO05D003385 4.8e-16 88.6 156 41.7
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 1.1e-15 87.4 108 74.1
FAN23G0792 Fragaria x ananassa HOM05D002747 ORTHO05D003770 2.7e-14 82.8 87 85.1
MCO11G315 Micromonas commoda HOM05D002747 ORTHO05D003069 3.5e-14 82.4 152 57.2
CBR_g685 Chara braunii HOM05D002747 ORTHO05D003069 4.5e-14 82.0 157 54.8
Nitab4.5_0000676g0100 Nicotiana tabacum HOM05D002747 ORTHO05D003069 2.5e-12 76.3 68 64.7
Haze_11620 Corylus avellana HOM05D002747 ORTHO05D003069 9.5e-12 74.3 42 83.3
AUR62027645 Chenopodium quinoa HOM05D001144 ORTHO05D002615 5.7e-09 65.1 42 69.0
Dinv27226 Davidia involucrata HOM05D002747 ORTHO05D003069 1.3e-08 63.9 47 68.1
Hma1.2p1_0171F.1_g075680 Hydrangea macrophylla HOM05D001247 ORTHO05D001111 2.2e-08 63.2 68 57.4
Cre01.g030550 Chlamydomonas reinhardtii HOM05D002747 ORTHO05D003069 4.9e-08 62.0 163 46.6
CSS0010384 Camellia sinensis var. sinensis HOM05D002747 ORTHO05D003069 2.4e-07 59.7 42 73.8
AUR62025816 Chenopodium quinoa HOM05D000074 ORTHO05D001293 4.1e-07 58.9 42 66.7
Peaxi162Scf00047g00439 Petunia axillaris HOM05D002747 ORTHO05D003069 4.1e-07 58.9 40 72.5
Peaxi162Scf00753g00333 Petunia axillaris HOM05D002747 ORTHO05D003069 4.1e-07 58.9 40 72.5
AUR62042257 Chenopodium quinoa HOM05D000074 ORTHO05D001293 1.2e-06 57.4 42 64.3


User provided reference genes

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