Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 6.8e-128 460.7 234 100.0
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 8.9e-112 407.1 234 85.9
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 2.0e-111 406.0 221 91.9
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 1.3e-107 393.3 234 83.8
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 2.8e-105 385.6 234 82.5
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 8.1e-105 384.0 234 81.2
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 1.1e-104 383.6 234 81.6
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 1.1e-104 383.6 234 81.2
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 1.4e-104 383.3 234 79.1
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 1.2e-103 380.2 233 79.8
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 2.0e-103 379.4 234 78.6
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 2.6e-103 379.0 234 78.6
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 3.4e-103 378.6 234 80.3
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 5.8e-103 377.9 234 80.8
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 5.8e-103 377.9 234 79.1
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 1.3e-102 376.7 234 79.5
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 1.3e-102 376.7 234 80.8
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 3.7e-102 375.2 233 79.0
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 3.7e-102 375.2 234 80.8
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 4.9e-102 374.8 234 79.9
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 4.9e-102 374.8 234 78.6
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 6.4e-102 374.4 234 78.6
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.4e-101 373.2 234 79.1
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.4e-101 373.2 234 79.9
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 1.9e-101 372.9 234 77.8
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 1.9e-101 372.9 234 78.2
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 2.4e-101 372.5 234 79.1
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 3.2e-101 372.1 234 80.3
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 3.2e-101 372.1 234 78.6
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 5.4e-101 371.3 234 79.1
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 9.2e-101 370.5 234 76.9
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 9.2e-101 370.5 234 78.6
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 1.6e-100 369.8 234 77.8
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.1e-100 369.4 235 77.9
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 3.5e-100 368.6 234 77.4
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 4.6e-100 368.2 228 81.1
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 4.6e-100 368.2 234 78.2
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 4.6e-100 368.2 234 77.4
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 7.8e-100 367.5 234 77.4
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 1.7e-99 366.3 234 76.5
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 3.9e-99 365.2 234 76.5
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 5.1e-99 364.8 234 76.1
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 6.6e-99 364.4 234 75.6
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 6.6e-99 364.4 234 75.6
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 1.5e-98 363.2 234 75.2
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.5e-98 362.5 234 75.6
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 4.3e-98 361.7 234 76.9
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 4.3e-98 361.7 234 74.4
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 5.6e-98 361.3 234 76.1
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.2e-97 360.1 234 75.2
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 1.2e-97 360.1 234 76.9
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.6e-97 359.8 234 76.5
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.6e-97 359.8 234 74.8
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 2.8e-97 359.0 234 76.1
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 3.6e-97 358.6 234 75.2
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 4.7e-97 358.2 235 78.3
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 4.7e-97 358.2 213 80.8
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 6.2e-97 357.8 234 73.5
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 6.2e-97 357.8 234 73.1
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 6.2e-97 357.8 234 75.6
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 1.1e-96 357.1 234 73.5
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 1.4e-96 356.7 234 75.2
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 1.8e-96 356.3 234 75.2
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 1.8e-96 356.3 234 75.6
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 4.0e-96 355.1 234 73.5
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 5.2e-96 354.8 254 71.7
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 5.2e-96 354.8 234 72.2
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 6.8e-96 354.4 234 72.2
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 8.9e-96 354.0 220 78.6
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 2.0e-95 352.8 234 73.1
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 3.4e-95 352.1 234 71.8
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 5.8e-95 351.3 271 67.5
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 5.8e-95 351.3 234 73.5
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 7.6e-95 350.9 203 81.8
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 2.9e-94 349.0 236 73.7
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 3.8e-94 348.6 234 72.6
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 4.9e-94 348.2 234 73.1
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 4.9e-94 348.2 234 72.6
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 8.4e-94 347.4 250 71.6
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.1e-93 347.1 234 72.6
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.1e-93 347.1 229 77.7
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.4e-93 346.7 234 71.8
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 1.4e-93 346.7 234 73.1
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 3.2e-93 345.5 213 79.8
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 4.1e-93 345.1 234 72.6
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.4e-93 344.7 241 71.4
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 7.1e-93 344.4 234 72.2
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 7.1e-93 344.4 228 75.4
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 9.2e-93 344.0 234 71.4
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.2e-92 343.6 236 71.2
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 1.2e-92 343.6 236 71.2
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 2.7e-92 342.4 220 77.7
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 7.8e-92 340.9 234 71.8
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 7.8e-92 340.9 234 71.8
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 1.0e-91 340.5 234 71.4
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 1.0e-91 340.5 234 69.7
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 2.3e-91 339.3 234 71.8
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 2.3e-91 339.3 234 71.4
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 3.9e-91 338.6 220 76.4
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 6.6e-91 337.8 236 74.6
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 1.5e-90 336.7 213 78.9
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.9e-90 336.3 234 70.5
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 1.9e-90 336.3 234 68.8
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 3.3e-90 335.5 234 70.1
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 7.3e-90 334.3 213 78.4
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 7.3e-90 334.3 234 70.1
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 7.3e-90 334.3 234 70.1
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 2.8e-89 332.4 234 69.7
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 1.1e-88 330.5 234 70.9
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 1.1e-88 330.5 234 70.9
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 1.1e-88 330.5 247 68.0
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 1.4e-88 330.1 248 67.7
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 6.9e-88 327.8 268 63.1
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 6.9e-88 327.8 304 59.9
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 6.9e-88 327.8 212 75.9
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 1.5e-87 326.6 236 68.6
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 4.6e-84 315.1 234 65.8
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 1.3e-83 313.5 204 74.5
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.3e-83 313.5 252 62.7
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 5.1e-83 311.6 233 67.8
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 1.9e-82 309.7 234 67.5
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 3.3e-82 308.9 234 68.4
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 8.1e-81 304.3 234 64.1
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 1.4e-80 303.5 231 68.0
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 3.1e-80 302.4 234 63.2
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 1.5e-79 300.1 234 68.4
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 1.7e-78 296.6 234 67.5
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 2.9e-78 295.8 234 65.8
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 1.1e-77 293.9 186 79.0
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 4.2e-77 292.0 226 61.9
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 3.5e-76 288.9 234 62.0
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.3e-75 287.0 234 62.8
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.0e-75 285.8 206 70.9
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.0e-75 285.8 303 52.8
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 3.9e-75 285.4 234 63.2
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.1e-74 283.9 196 76.0
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 7.4e-74 281.2 234 60.7
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 4.8e-73 278.5 233 59.7
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 4.0e-72 275.4 234 63.7
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 5.8e-71 271.6 168 79.2
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 2.9e-70 269.2 251 53.4
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 8.4e-70 267.7 233 57.5
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 1.9e-66 256.5 168 71.4
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 4.3e-66 255.4 234 57.3
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 5.6e-66 255.0 234 54.3
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 1.8e-64 250.0 168 72.0
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.7e-62 243.4 147 85.0
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 2.5e-61 239.6 138 84.1
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.1e-57 226.5 207 59.9
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 2.5e-53 213.0 234 47.9
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 7.2e-53 211.5 234 47.4
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.2e-52 210.7 187 61.5
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 5.3e-48 195.3 122 79.5
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 6.5e-46 188.3 166 61.4
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 9.1e-40 167.9 104 75.0
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 1.3e-38 164.1 105 77.1
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 6.5e-38 161.8 148 60.8
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 9.4e-37 157.9 100 81.0
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 2.5e-29 133.3 119 57.1
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 2.5e-29 133.3 119 57.1
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 2.5e-29 133.3 233 36.5
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 1.6e-28 130.6 84 77.4
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 1.4e-24 117.5 66 83.3
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 2.2e-22 110.2 82 64.6
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 5.2e-19 99.0 142 45.8
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 6.8e-19 98.6 160 39.4
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 5.7e-18 95.5 84 58.3
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 8.3e-17 91.7 64 71.9
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 1.1e-16 91.3 82 57.3
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 4.5e-15 85.9 68 63.2
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 5.0e-14 82.4 99 45.5
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 1.4e-08 64.3 123 39.0
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 1.6e-07 60.8 51 64.7
Ca_29445_v3 Cicer arietinum L. HOM05D004157 ORTHO05D148328 5.9e-07 58.9 195 26.2


User provided reference genes

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