Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055628.1 Olea europaea HOM05D004463 ORTHO05D004724 4.0e-49 199.1 257 100.0
Oeu036635.1 Olea europaea HOM05D004463 ORTHO05D004724 7.9e-45 184.9 257 96.9
Cc02_g16980 Coffea canephora HOM05D004463 ORTHO05D004724 5.9e-32 142.1 240 87.5
Oeu046135.1 Olea europaea HOM05D004463 ORTHO05D004724 1.3e-31 141.0 234 90.2
DCAR_022913 Daucus carota HOM05D004463 ORTHO05D004724 1.4e-30 137.5 243 86.0
QL11p046341 Quercus lobata HOM05D004463 ORTHO05D004724 2.5e-30 136.7 241 80.1
Potri.004G161800 Populus trichocarpa HOM05D004463 ORTHO05D004724 2.7e-29 133.3 234 79.5
Sopen10g024240 Solanum pennellii HOM05D004463 ORTHO05D004724 6.1e-29 132.1 244 82.8
CiPaw.13G045000 Carya illinoinensis HOM05D004463 ORTHO05D004724 7.9e-29 131.7 236 86.4
Dinv42004 Davidia involucrata HOM05D004463 ORTHO05D004724 1.0e-28 131.3 258 81.0
CiPaw.14G035900 Carya illinoinensis HOM05D004463 ORTHO05D004724 1.8e-28 130.6 236 86.9
Solyc10g054330.3 Solanum lycopersicum HOM05D004463 ORTHO05D004724 1.8e-28 130.6 245 81.6
PGSC0003DMG400026665 Solanum tuberosum HOM05D004463 ORTHO05D004724 2.3e-28 130.2 246 81.3
ECA232G1454 Erigeron canadensis HOM05D004463 ORTHO05D004724 3.9e-28 129.4 239 85.8
CAN.G95.2 Capsicum annuum HOM05D004463 ORTHO05D004724 8.7e-28 128.3 249 76.7
Glyma.04G008700 Glycine max HOM05D004463 ORTHO05D004724 1.5e-27 127.5 265 73.2
Actinidia27858 Actinidia chinensis HOM05D000578 ORTHO05D000422 2.5e-27 126.7 239 82.0
HanXRQChr05g0143421 Helianthus annuus HOM05D004463 ORTHO05D004724 4.3e-27 125.9 257 82.9
Manes.17G001400 Manihot esculenta HOM05D004463 ORTHO05D004724 5.7e-27 125.6 234 85.5
ClCG02G004610 Citrullus lanatus HOM05D004463 ORTHO05D004724 7.4e-27 125.2 246 78.5
Glyma.06G008500 Glycine max HOM05D004463 ORTHO05D004724 7.4e-27 125.2 245 77.1
Phvul.009G003600 Phaseolus vulgaris HOM05D004463 ORTHO05D004724 9.7e-27 124.8 248 77.0
arahy.Tifrunner.gnm1.ann1.0JY1T4 Arachis hypogaea HOM05D004463 ORTHO05D004724 1.6e-26 124.0 240 79.6
arahy.Tifrunner.gnm1.ann1.2L6AT5 Arachis hypogaea HOM05D004463 ORTHO05D004724 1.6e-26 124.0 240 79.6
CsaV3_7G000350 Cucumis sativus L. HOM05D004463 ORTHO05D004724 1.6e-26 124.0 246 77.6
MELO3C013423.2 Cucumis melo HOM05D004463 ORTHO05D004724 2.2e-26 123.6 246 77.6
Dinv23459 Davidia involucrata HOM05D004463 ORTHO05D004724 2.2e-26 123.6 257 79.8
Gohir.A03G199000 Gossypium hirsutum HOM05D004463 ORTHO05D004724 6.3e-26 122.1 249 77.1
Gohir.D02G220400 Gossypium hirsutum HOM05D004463 ORTHO05D004724 8.2e-26 121.7 250 76.0
MD10G1063900 Malus domestica HOM05D004463 ORTHO05D004724 8.2e-26 121.7 246 77.6
Manes.15G189900 Manihot esculenta HOM05D004463 ORTHO05D004724 8.2e-26 121.7 257 78.6
Nitab4.5_0001317g0040 Nicotiana tabacum HOM05D004463 ORTHO05D004724 8.2e-26 121.7 263 77.9
Atru.chr5.3137 Acer truncatum HOM05D004463 ORTHO05D004724 1.1e-25 121.3 240 80.0
Duzib248G1389 Durio zibethinus HOM05D004463 ORTHO05D004724 1.1e-25 121.3 239 79.5
CiPaw.06G128800 Carya illinoinensis HOM05D004463 ORTHO05D004724 1.4e-25 120.9 240 84.2
Gorai.005G248300 Gossypium raimondii HOM05D004463 ORTHO05D004724 2.4e-25 120.2 250 68.0
Sed0022229 Sechium edule HOM05D004463 ORTHO05D004724 2.4e-25 120.2 244 78.3
VMungo1309G0843 Vigna mungo HOM05D000018 ORTHO05D001040 2.4e-25 120.2 244 75.8
CANSAT11G2458 Cannabis sativa HOM05D004463 ORTHO05D004724 4.1e-25 119.4 247 78.1
PGR042G1049 Punica granatum HOM05D004463 ORTHO05D004724 4.1e-25 119.4 242 78.1
Sabra04G0108800 Salix brachista HOM05D004463 ORTHO05D004724 4.1e-25 119.4 234 80.3
Actinidia00571 Actinidia chinensis HOM05D004463 ORTHO05D004724 2.6e-24 116.7 237 81.0
GSVIVG01024180001 Vitis vinifera HOM05D004463 ORTHO05D004724 2.6e-24 116.7 234 85.5
Thecc.02G075900 Theobroma cacao HOM05D004463 ORTHO05D004724 1.3e-23 114.4 239 83.7
MD00G1040200 Malus domestica HOM05D004463 ORTHO05D004724 1.7e-23 114.0 248 75.8
RcHm_v2.0_Chr6g0267601 Rosa chinensis HOM05D004463 ORTHO05D004724 2.9e-23 113.2 248 75.4
Ciclev10029089m.g Citrus clementina HOM05D004463 ORTHO05D004724 3.8e-23 112.8 247 75.7
Lalb_Chr23g0265191 Lupinus albus HOM05D004463 ORTHO05D004724 5.0e-23 112.5 246 76.8
Lj1g0018700 Lotus japonicus HOM05D004463 ORTHO05D004724 6.5e-23 112.1 249 76.7
Hund00218 Selenicereus undatus HOM05D004463 ORTHO05D004724 1.9e-22 110.5 231 73.6
Cpa.g.sc150.22 Carica papaya HOM05D004463 ORTHO05D004724 2.5e-22 110.2 244 77.0
COL.COLO4_26036 Corchorus olitorius HOM05D004463 ORTHO05D004724 2.5e-22 110.2 240 77.5
Duzib052G0336 Durio zibethinus HOM05D004463 ORTHO05D004724 3.2e-22 109.8 239 82.8
Eucgr.I01324 Eucalyptus grandis HOM05D004463 ORTHO05D004724 7.2e-22 108.6 247 76.5
Hma1.2p1_0066F.1_g035800 Hydrangea macrophylla HOM05D004463 ORTHO05D004724 6.1e-21 105.5 243 77.8
Ca_15338_v3 Cicer arietinum L. HOM05D004463 ORTHO05D004724 1.4e-20 104.4 247 74.1
Prupe.8G085500 Prunus persica HOM05D004463 ORTHO05D004724 1.4e-20 104.4 247 66.4
TPR.G32219 Trifolium pratense HOM05D004463 ORTHO05D004724 3.9e-20 102.8 254 72.8
TWI31G1301 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 5.1e-20 102.4 246 74.4
FAN20G1990 Fragaria x ananassa HOM05D004463 ORTHO05D004724 8.8e-20 101.7 251 78.5
FAN15G3389 Fragaria x ananassa HOM05D004463 ORTHO05D004724 1.5e-19 100.9 247 80.2
FvH4_2g10323 Fragaria vesca HOM05D004463 ORTHO05D004724 4.4e-19 99.4 250 78.8
FAN27G0878 Fragaria x ananassa HOM05D004463 ORTHO05D004724 4.4e-19 99.4 250 78.8
FAN24G1814 Fragaria x ananassa HOM05D004463 ORTHO05D004724 5.7e-19 99.0 271 78.6
Hund26868 Selenicereus undatus HOM05D004463 ORTHO05D004724 2.2e-18 97.1 261 71.3
Manes.05G152600 Manihot esculenta HOM05D004463 ORTHO05D004724 1.8e-17 94.0 236 74.6
Peaxi162Scf00538g00125 Petunia axillaris HOM05D004463 ORTHO05D004724 1.8e-17 94.0 50 84.0
A06p48750 Brassica napus HOM05D004463 ORTHO05D004724 2.4e-17 93.6 156 76.3
BolC7t46753H Brassica oleracea HOM05D004463 ORTHO05D004724 2.4e-17 93.6 156 76.3
Sed0016215 Sechium edule HOM05D004463 ORTHO05D004724 5.3e-17 92.4 243 79.0
GSVIVG01009823001 Vitis vinifera HOM05D004463 ORTHO05D004724 6.9e-17 92.0 229 83.4
Migut.B00180 Erythranthe guttata HOM05D004463 ORTHO05D004724 9.1e-17 91.7 200 86.5
C07p63410 Brassica napus HOM05D004463 ORTHO05D004724 2.0e-16 90.5 133 84.2
BraA06t27741Z Brassica rapa HOM05D004463 ORTHO05D004724 5.9e-16 89.0 157 75.8
THA.LOC104807766 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 5.9e-16 89.0 215 75.3
CSS0016875 Camellia sinensis var. sinensis HOM05D004463 ORTHO05D004724 1.7e-15 87.4 210 88.6
CARHR247750 Cardamine hirsuta HOM05D004463 ORTHO05D004724 2.2e-15 87.0 73 56.2
Dinv39485 Davidia involucrata HOM05D004463 ORTHO05D004724 2.2e-15 87.0 50 76.0
THA.LOC104813804 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 2.2e-15 87.0 50 74.0
Sc25g0002840 Simmondsia chinensis HOM05D004463 ORTHO05D004724 3.8e-15 86.3 50 74.0
THA.LOC104804116 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 6.5e-15 85.5 72 59.7
Psat5g004520 Pisum sativum HOM05D004463 ORTHO05D004724 8.5e-15 85.1 73 57.5
Os10g0545300 Oryza sativa ssp. japonica HOM05D004463 ORTHO05D004724 1.4e-14 84.3 239 79.1
Psat5g004400 Pisum sativum HOM05D004463 ORTHO05D004724 1.9e-14 84.0 50 72.0
TPR.G32170 Trifolium pratense HOM05D004463 ORTHO05D004724 1.9e-14 84.0 50 72.0
Rhsim05G0068600 Rhododendron simsii HOM05D004463 ORTHO05D004724 5.5e-14 82.4 201 77.1
Atru.chr13.360 Acer truncatum HOM05D004463 ORTHO05D004724 9.4e-14 81.6 50 72.0
Haze_03437 Corylus avellana HOM05D004463 ORTHO05D004724 1.2e-13 81.3 233 73.4
Duzib132G0628 Durio zibethinus HOM05D004463 ORTHO05D004724 2.1e-13 80.5 215 83.3
C06p49550 Brassica napus HOM05D004463 ORTHO05D004724 2.7e-13 80.1 52 71.2
BolC6t39994H Brassica oleracea HOM05D004463 ORTHO05D004724 2.7e-13 80.1 52 71.2
Rhsim11G0183400 Rhododendron simsii HOM05D000078 ORTHO05D004724 3.6e-13 79.7 49 77.6
A07p41130 Brassica napus HOM05D004463 ORTHO05D004724 4.7e-13 79.3 52 69.2
AL2G35540 Arabidopsis lyrata HOM05D004463 ORTHO05D004724 6.1e-13 79.0 49 71.4
Carub.0002s2242 Capsella rubella HOM05D004463 ORTHO05D004724 6.1e-13 79.0 49 71.4
HPP92_007060 Vanilla planifolia HOM05D004463 ORTHO05D004724 6.1e-13 79.0 240 79.2
AUR62014431 Chenopodium quinoa HOM05D004463 ORTHO05D004724 1.0e-12 78.2 44 77.3
Aa31LG4G5800 Aethionema arabicum HOM05D004463 ORTHO05D004724 1.4e-12 77.8 52 69.2
Zm00001eb393940 Zea mays HOM05D004463 ORTHO05D004724 3.9e-12 76.3 52 71.2
CDE02G2851 Ceratophyllum demersum HOM05D003292 ORTHO05D004237 5.2e-12 75.9 235 76.6
Thecc.08G037600 Theobroma cacao HOM05D004463 ORTHO05D004724 5.2e-12 75.9 71 67.6
Ciclev10002195m.g Citrus clementina HOM05D004463 ORTHO05D004724 6.7e-12 75.5 50 66.0
Thhalv10019006m.g Eutrema salsugineum HOM05D004463 ORTHO05D004724 1.5e-11 74.3 47 74.5
THA.LOC104809337 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 2.0e-11 73.9 50 64.0
HPP92_007058 Vanilla planifolia HOM05D004463 ORTHO05D004724 2.6e-11 73.6 47 68.1
PSO339G5998 Papaver somniferum HOM05D004463 ORTHO05D004724 3.3e-11 73.2 50 62.0
PSO648G0094 Papaver somniferum HOM05D004463 ORTHO05D004724 3.3e-11 73.2 50 62.0
TWI36G1578 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 3.3e-11 73.2 50 66.0
AT1G75560 Arabidopsis thaliana HOM05D004463 ORTHO05D004724 4.4e-11 72.8 51 66.7
Potri.005G234700 Populus trichocarpa HOM05D004463 ORTHO05D004724 5.7e-11 72.4 236 72.0
Sp5g30690 Schrenkiella parvula HOM05D004463 ORTHO05D004724 5.7e-11 72.4 47 72.3
Sabra05G0180900 Salix brachista HOM05D004463 ORTHO05D004724 9.7e-11 71.6 236 72.0
TAR369G0673 Trochodendron aralioides HOM05D004463 ORTHO05D004724 1.7e-10 70.9 51 64.7
SGA_v2.0_scaffold326G48748 Striga asiatica HOM05D004463 ORTHO05D004724 2.8e-10 70.1 50 62.0
CSS0035906 Camellia sinensis var. sinensis HOM05D004463 ORTHO05D004724 3.7e-10 69.7 51 64.7
AL7G10930 Arabidopsis lyrata HOM05D004463 ORTHO05D004724 4.8e-10 69.3 49 65.3
AUR62034566 Chenopodium quinoa HOM05D004463 ORTHO05D004724 8.2e-10 68.6 58 56.9
GSVIVG01011366001 Vitis vinifera HOM05D002216 ORTHO05D002011 8.2e-10 68.6 51 62.7
Rhsim09G0164600 Rhododendron simsii HOM05D004463 ORTHO05D004724 1.1e-09 68.2 47 63.8
TAR636G2492 Trochodendron aralioides HOM05D004463 ORTHO05D004724 1.1e-09 68.2 51 64.7
Cfa001504 Carpinus fangiana HOM05D001680 ORTHO05D001596 1.8e-09 67.4 51 62.7
Haze_17039 Corylus avellana HOM05D001446 ORTHO05D001360 1.8e-09 67.4 51 62.7
Manes.10G032800 Manihot esculenta HOM05D004463 ORTHO05D004724 1.8e-09 67.4 50 62.0
COL.COLO4_14964 Corchorus olitorius HOM05D004463 ORTHO05D004724 2.4e-09 67.0 51 62.7
Dinv25993 Davidia involucrata HOM05D004463 ORTHO05D004724 2.4e-09 67.0 51 60.8
Lsat_1_v5_gn_8_16561 Lactuca sativa HOM05D004463 ORTHO05D004724 4.1e-09 66.2 50 62.0
GSVIVG01016581001 Vitis vinifera HOM05D004463 ORTHO05D004724 4.1e-09 66.2 51 60.8
PSO339G4128 Papaver somniferum HOM05D004463 ORTHO05D004724 5.3e-09 65.9 48 64.6
PSO384G1624 Papaver somniferum HOM05D004463 ORTHO05D004724 5.3e-09 65.9 48 64.6
Aqoxy4G02979 Aquilegia oxysepala HOM05D004463 ORTHO05D004724 7.0e-09 65.5 234 70.5
QL08p059074 Quercus lobata HOM05D004463 ORTHO05D004724 7.0e-09 65.5 49 63.3
Lj8C86T7 Lonicera japonica HOM05D004463 ORTHO05D004724 1.2e-08 64.7 51 60.8
TWI75G1243 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 1.2e-08 64.7 249 59.4
ECA233G0628 Erigeron canadensis HOM05D001446 ORTHO05D001360 1.6e-08 64.3 49 55.1
Duzib106G1221 Durio zibethinus HOM05D004463 ORTHO05D004724 2.0e-08 63.9 51 60.8
Thecc.10G047100 Theobroma cacao HOM05D004463 ORTHO05D004724 2.0e-08 63.9 51 60.8
RcHm_v2.0_Chr1g0366331 Rosa chinensis HOM05D004463 ORTHO05D004724 3.5e-08 63.2 49 63.3
SGA_v2.0_scaffold32G13220 Striga asiatica HOM05D039287 ORTHO05D004724 3.5e-08 63.2 133 82.7
Hma1.2p1_0727F.1_g209210 Hydrangea macrophylla HOM05D004463 ORTHO05D004724 4.5e-08 62.8 51 58.8
FAN10G2262 Fragaria x ananassa HOM05D004463 ORTHO05D004724 5.9e-08 62.4 43 65.1
FvH4_7g21972 Fragaria vesca HOM05D004463 ORTHO05D004724 7.7e-08 62.0 49 61.2
FAN01G1741 Fragaria x ananassa HOM05D004463 ORTHO05D004724 7.7e-08 62.0 49 61.2
FAN06G0682 Fragaria x ananassa HOM05D004463 ORTHO05D004724 7.7e-08 62.0 49 61.2
FAN06G1248 Fragaria x ananassa HOM05D004463 ORTHO05D004724 7.7e-08 62.0 49 61.2
MBI19_g03564_MAGBIO Magnolia biondii HOM05D004463 ORTHO05D004724 1.0e-07 61.6 209 82.8
Gohir.D10G224732 Gossypium hirsutum HOM05D004463 ORTHO05D004724 1.3e-07 61.2 42 66.7
SEGI_31170 Sequoiadendron giganteum HOM05D004463 ORTHO05D004724 1.7e-07 60.8 174 80.5
AUR62010398 Chenopodium quinoa HOM05D004463 ORTHO05D004724 2.9e-07 60.1 107 91.6
FAN03G3339 Fragaria x ananassa HOM05D004463 ORTHO05D004724 2.9e-07 60.1 49 59.2
EL10Ac1g00556 Beta vulgaris HOM05D004463 ORTHO05D004724 3.8e-07 59.7 92 39.1
MD01G1124300 Malus domestica HOM05D004463 ORTHO05D004724 3.8e-07 59.7 49 57.1
Prupe.2G231800 Prunus persica HOM05D004463 ORTHO05D004724 3.8e-07 59.7 43 62.8
PGR044G0901 Punica granatum HOM05D004463 ORTHO05D004724 5.0e-07 59.3 51 56.9
AUR62016820 Chenopodium quinoa HOM05D004463 ORTHO05D004724 8.5e-07 58.5 106 91.5
Gorai.011G255700 Gossypium raimondii HOM05D004463 ORTHO05D004724 1.1e-06 58.2 42 61.9
Sc20g0004810 Simmondsia chinensis HOM05D004463 ORTHO05D004724 1.1e-06 58.2 42 69.0


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