Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055488.1 Olea europaea HOM05D005813 ORTHO05D007310 2.0e-256 888.6 468 100.0
MSTRG.17192 Avicennia marina HOM05D005813 ORTHO05D007310 2.6e-195 685.6 468 73.9
SalBow5G4545 Salvia bowleyana HOM05D005813 ORTHO05D007310 7.0e-193 677.6 468 78.2
Migut.B01633 Erythranthe guttata HOM05D005813 ORTHO05D007310 6.2e-189 664.5 462 72.5
SGA_v2.0_scaffold153G37009 Striga asiatica HOM05D005813 ORTHO05D007310 2.6e-187 659.1 468 71.4
Cc02_g23900 Coffea canephora HOM05D005813 ORTHO05D007310 7.5e-187 657.5 471 69.9
Lj7A528T62 Lonicera japonica HOM05D005813 ORTHO05D007310 4.6e-184 648.3 483 67.9
PGR031G3848 Punica granatum HOM05D005813 ORTHO05D007310 7.3e-182 641.0 465 70.1
CiPaw.02G167800 Carya illinoinensis HOM05D005813 ORTHO05D007310 1.2e-181 640.2 465 69.5
Duzib138G0196 Durio zibethinus HOM05D005813 ORTHO05D007310 3.6e-181 638.6 468 68.2
Glyma.09G269300 Glycine max HOM05D005813 ORTHO05D007310 3.6e-181 638.6 468 68.8
Manes.05G045300 Manihot esculenta HOM05D005813 ORTHO05D007310 5.2e-180 634.8 468 68.8
Nitab4.5_0004917g0040 Nicotiana tabacum HOM05D005813 ORTHO05D007310 1.2e-179 633.6 468 68.4
ClCG05G002290 Citrullus lanatus HOM05D005813 ORTHO05D007310 2.0e-179 632.9 464 67.9
Glyma.18G220700 Glycine max HOM05D005813 ORTHO05D007310 2.6e-179 632.5 468 68.4
Thecc.01G376600 Theobroma cacao HOM05D005813 ORTHO05D007310 2.6e-179 632.5 468 67.9
Duzib133G0639 Durio zibethinus HOM05D005813 ORTHO05D007310 4.4e-179 631.7 468 67.9
MELO3C006191.2 Cucumis melo HOM05D005813 ORTHO05D007310 9.9e-179 630.6 464 68.1
CSS0030666 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 4.9e-178 628.2 464 69.2
CSS0042195 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 4.9e-178 628.2 464 69.2
CiPaw.01G262200 Carya illinoinensis HOM05D005813 ORTHO05D007310 6.4e-178 627.9 462 68.8
QL08p052527 Quercus lobata HOM05D005813 ORTHO05D007310 8.4e-178 627.5 465 68.6
Potri.014G069400 Populus trichocarpa HOM05D005813 ORTHO05D007310 1.4e-177 626.7 468 68.8
TAR374G0529 Trochodendron aralioides HOM05D005813 ORTHO05D007310 5.4e-177 624.8 468 67.5
CsaV3_3G009700 Cucumis sativus L. HOM05D005813 ORTHO05D007310 1.2e-176 623.6 464 67.7
Nn4g26391 Nelumbo nucifera HOM05D005813 ORTHO05D007310 2.1e-176 622.9 466 66.7
Nn1g01240 Nelumbo nucifera HOM05D005813 ORTHO05D007310 2.7e-176 622.5 467 67.2
Sopen01g037050 Solanum pennellii HOM05D005813 ORTHO05D007310 3.5e-176 622.1 471 69.0
TPR.G29407 Trifolium pratense HOM05D005813 ORTHO05D007310 4.6e-176 621.7 462 67.7
Ca_11657_v3 Cicer arietinum L. HOM05D005813 ORTHO05D007310 6.0e-176 621.3 462 68.0
Cfa001724 Carpinus fangiana HOM05D005813 ORTHO05D007310 7.8e-176 620.9 473 67.4
Solyc01g091310.3 Solanum lycopersicum HOM05D005813 ORTHO05D007310 1.7e-175 619.8 471 66.5
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 2.3e-175 619.4 462 67.5
unitig_749.g14372 Utricularia gibba HOM05D005813 ORTHO05D007310 2.3e-175 619.4 469 67.4
Sabra02G0117100 Salix brachista HOM05D005813 ORTHO05D007310 3.9e-175 618.6 481 66.5
Sc02g0002610 Simmondsia chinensis HOM05D005813 ORTHO05D007310 3.9e-175 618.6 468 66.0
TWI59G1428 Tripterygium wilfordii HOM05D005813 ORTHO05D007310 3.9e-175 618.6 462 67.7
Prupe.2G145000 Prunus persica HOM05D005813 ORTHO05D007310 5.1e-175 618.2 464 70.3
Sabra02G0115400 Salix brachista HOM05D005813 ORTHO05D007310 5.1e-175 618.2 487 65.9
arahy.Tifrunner.gnm1.ann1.4B5N4V Arachis hypogaea HOM05D005813 ORTHO05D007310 1.5e-174 616.7 465 66.9
Gohir.A08G134600 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.9e-174 616.3 468 70.1
THA.LOC104817009 Tarenaya hassleriana HOM05D005813 ORTHO05D007310 2.5e-174 615.9 462 66.9
Gohir.D08G155500 Gossypium hirsutum HOM05D005813 ORTHO05D007310 7.3e-174 614.4 468 70.3
Gorai.004G161700 Gossypium raimondii HOM05D005813 ORTHO05D007310 7.3e-174 614.4 468 70.3
Potri.002G148100 Populus trichocarpa HOM05D005813 ORTHO05D007310 1.6e-173 613.2 465 68.8
CANSAT56G4177 Cannabis sativa HOM05D005813 ORTHO05D007310 2.8e-173 612.5 465 67.7
Phvul.008G076400 Phaseolus vulgaris HOM05D005813 ORTHO05D007310 2.8e-173 612.5 468 70.5
VMungo1383G1345 Vigna mungo HOM05D005813 ORTHO05D007310 2.8e-173 612.5 468 68.2
Gohir.A08G031100 Gossypium hirsutum HOM05D005813 ORTHO05D007310 3.6e-173 612.1 463 66.1
Eucgr.D02453 Eucalyptus grandis HOM05D005813 ORTHO05D007310 1.4e-172 610.1 465 66.2
MBI04_g35272_MAGBIO Magnolia biondii HOM05D005813 ORTHO05D007310 1.4e-172 610.1 464 65.1
Rhsim01G0147300 Rhododendron simsii HOM05D005813 ORTHO05D007310 1.4e-172 610.1 495 67.3
Ciclev10020183m.g Citrus clementina HOM05D005813 ORTHO05D007310 3.1e-172 609.0 470 67.2
Hund27345 Selenicereus undatus HOM05D005813 ORTHO05D007310 3.1e-172 609.0 468 65.6
Cpa.g.sc18.111 Carica papaya HOM05D005813 ORTHO05D007310 4.0e-172 608.6 468 66.7
Dinv43710 Davidia involucrata HOM05D005813 ORTHO05D007310 2.6e-171 605.9 424 73.3
Medtr7g074890 Medicago truncatula HOM05D005813 ORTHO05D007310 1.3e-170 603.6 463 67.0
arahy.Tifrunner.gnm1.ann1.DKE7V3 Arachis hypogaea HOM05D005813 ORTHO05D007310 1.7e-170 603.2 458 66.4
Lalb_Chr03g0039571 Lupinus albus HOM05D005813 ORTHO05D007310 6.4e-170 601.3 469 65.2
Gohir.D08G042200 Gossypium hirsutum HOM05D005813 ORTHO05D007310 3.2e-169 599.0 463 65.0
FAN10G1195 Fragaria x ananassa HOM05D005813 ORTHO05D007310 2.7e-168 595.9 469 67.8
Lsat_1_v5_gn_7_7160 Lactuca sativa HOM05D005813 ORTHO05D007310 3.5e-168 595.5 460 67.6
Sed0028100 Sechium edule HOM05D005813 ORTHO05D007310 3.5e-168 595.5 462 65.8
FvH4_7g11840 Fragaria vesca HOM05D005813 ORTHO05D007310 6.0e-168 594.7 469 68.9
FAN06G0614 Fragaria x ananassa HOM05D005813 ORTHO05D007310 6.0e-168 594.7 469 68.9
Sp6g00150 Schrenkiella parvula HOM05D005813 ORTHO05D007310 7.8e-168 594.3 468 64.5
Thhalv10028676m.g Eutrema salsugineum HOM05D005813 ORTHO05D007310 1.7e-167 593.2 464 67.2
AT4G00090 Arabidopsis thaliana HOM05D005813 ORTHO05D007310 5.1e-167 591.7 464 64.9
FAN10G2798 Fragaria x ananassa HOM05D005813 ORTHO05D007310 5.1e-167 591.7 469 68.7
FAN01G0479 Fragaria x ananassa HOM05D005813 ORTHO05D007310 8.7e-167 590.9 469 68.7
EL10Ac1g00888 Beta vulgaris HOM05D005813 ORTHO05D007310 1.1e-166 590.5 468 62.4
Carub.0006s3714 Capsella rubella HOM05D005813 ORTHO05D007310 1.5e-166 590.1 468 63.9
MD02G1204700 Malus domestica HOM05D005813 ORTHO05D007310 1.5e-166 590.1 470 65.3
AL6G53420 Arabidopsis lyrata HOM05D005813 ORTHO05D007310 2.5e-166 589.3 464 64.7
Sed0000354 Sechium edule HOM05D005813 ORTHO05D007310 5.6e-166 588.2 438 68.0
BcaB01g02210 Brassica carinata HOM05D005813 ORTHO05D007310 7.3e-166 587.8 468 63.2
HanXRQChr04g0122421 Helianthus annuus HOM05D005813 ORTHO05D007310 7.3e-166 587.8 459 65.8
BcaC04g24202 Brassica carinata HOM05D005813 ORTHO05D007310 2.8e-165 585.9 470 63.2
BolC9t52946H Brassica oleracea HOM05D005813 ORTHO05D007310 2.8e-165 585.9 470 63.2
C09p00110 Brassica napus HOM05D005813 ORTHO05D007310 4.8e-165 585.1 470 63.0
BraA09t35685Z Brassica rapa HOM05D005813 ORTHO05D007310 4.8e-165 585.1 470 63.0
CARHR248130 Cardamine hirsuta HOM05D005813 ORTHO05D007310 6.2e-165 584.7 464 63.8
FAN06G1564 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.1e-164 583.9 481 66.9
vmacro21010 Vaccinium macrocarpon HOM05D005813 ORTHO05D007310 5.3e-164 581.6 478 64.4
PSO478G4467 Papaver somniferum HOM05D005813 ORTHO05D007310 6.9e-164 581.3 457 63.9
PSO782G1692 Papaver somniferum HOM05D005813 ORTHO05D007310 9.0e-164 580.9 457 63.2
Ah.05g174210 Amaranthus hybridus HOM05D005813 ORTHO05D007310 2.6e-163 579.3 466 62.7
Gorai.004G040800 Gossypium raimondii HOM05D005813 ORTHO05D007310 2.6e-163 579.3 509 59.3
Atru.chr5.306 Acer truncatum HOM05D005813 ORTHO05D007310 5.8e-163 578.2 466 64.8
GSVIVG01027606001 Vitis vinifera HOM05D005813 ORTHO05D007310 9.9e-163 577.4 440 66.1
RcHm_v2.0_Chr1g0350521 Rosa chinensis HOM05D005813 ORTHO05D007310 6.4e-162 574.7 469 67.0
Haze_16813 Corylus avellana HOM05D005813 ORTHO05D007310 9.3e-161 570.9 432 70.1
Aa31LG5G9310 Aethionema arabicum HOM05D005813 ORTHO05D007310 3.5e-160 568.9 492 60.8
Aqoxy7G00631 Aquilegia oxysepala HOM05D005813 ORTHO05D007310 3.5e-160 568.9 392 70.4
Nitab4.5_0000457g0240 Nicotiana tabacum HOM05D005813 ORTHO05D007310 1.8e-159 566.6 411 68.9
unitig_76.g29089 Utricularia gibba HOM05D005813 ORTHO05D007310 2.3e-159 566.2 425 68.2
AUR62004213 Chenopodium quinoa HOM05D005813 ORTHO05D007310 2.5e-158 562.8 468 60.3
ATR0810G089 Amborella trichopoda HOM05D005813 ORTHO05D007310 5.6e-158 561.6 456 61.6
MD07G1121300 Malus domestica HOM05D005813 ORTHO05D007310 7.4e-158 561.2 471 63.5
FAN03G1318 Fragaria x ananassa HOM05D005813 ORTHO05D007310 2.1e-152 543.1 430 69.3
CDE09G1050 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 1.0e-151 540.8 465 58.1
CDE11G1084 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 1.0e-151 540.8 465 58.5
Actinidia12685 Actinidia chinensis HOM05D005813 ORTHO05D007310 3.3e-150 535.8 469 60.6
Peaxi162Scf00013g03441 Petunia axillaris HOM05D005813 ORTHO05D007310 9.6e-150 534.3 427 65.6
Psat3g115920 Pisum sativum HOM05D005813 ORTHO05D007310 3.1e-148 529.3 462 60.4
SEGI_07293 Sequoiadendron giganteum HOM05D005813 ORTHO05D007310 6.5e-146 521.5 462 58.2
HPP92_003519 Vanilla planifolia HOM05D005813 ORTHO05D007310 1.8e-143 513.5 468 57.1
Zm00001eb065090 Zea mays HOM05D005813 ORTHO05D007310 2.0e-139 500.0 462 56.5
AUR62013635 Chenopodium quinoa HOM05D005813 ORTHO05D007310 5.9e-139 498.4 479 54.3
COL.COLO4_12543 Corchorus olitorius HOM05D005813 ORTHO05D007310 8.8e-135 484.6 468 55.1
PGSC0003DMG400012776 Solanum tuberosum HOM05D005813 ORTHO05D007310 3.1e-124 449.5 302 72.5
Mapoly0037s0016 Marchantia polymorpha HOM05D005813 ORTHO05D007310 2.0e-123 446.8 464 53.0
AagrBONN_evm.TU.Sc2ySwM_117.33 Anthoceros agrestis HOM05D005813 ORTHO05D007310 7.7e-123 444.9 420 56.2
DCAR_015903 Daucus carota HOM05D005813 ORTHO05D007310 2.9e-122 443.0 356 64.6
Pp3c19_7620 Physcomitrium patens HOM05D005813 ORTHO05D007310 4.7e-120 435.6 471 49.3
A09p00750 Brassica napus HOM05D005813 ORTHO05D007310 9.1e-116 421.4 305 66.9
SHI01708 Sapria himalayana HOM05D005813 ORTHO05D007310 4.2e-113 412.5 463 49.7
Psat3g202640 Pisum sativum HOM05D005813 ORTHO05D007310 1.1e-108 397.9 324 63.9
SMO367G0685 Selaginella moellendorffii HOM05D005813 ORTHO05D007310 1.1e-108 397.9 387 52.5
PSO782G5041 Papaver somniferum HOM05D005813 ORTHO05D007310 8.0e-104 381.7 353 56.4
CBR_g23070 Chara braunii HOM05D005813 ORTHO05D007310 5.7e-102 375.6 397 50.6
PSO170G3521 Papaver somniferum HOM05D005813 ORTHO05D007310 4.9e-101 372.5 342 57.0
CBR_g21297 Chara braunii HOM05D005813 ORTHO05D007310 3.5e-99 366.3 400 49.2
PSO675G1684 Papaver somniferum HOM05D005813 ORTHO05D007310 2.6e-78 297.0 268 56.7
Actinidia33466 Actinidia chinensis HOM05D005813 ORTHO05D007310 8.6e-74 282.0 209 67.9
PSO478G0826 Papaver somniferum HOM05D005813 ORTHO05D007310 3.0e-50 203.8 183 58.5
Cre02.g102450 Chlamydomonas reinhardtii HOM05D005813 ORTHO05D007310 3.6e-48 196.8 408 33.6
MCO05G082 Micromonas commoda HOM05D005813 ORTHO05D007310 3.8e-37 160.2 405 31.4
PSO478G4170 Papaver somniferum HOM05D005813 ORTHO05D007310 4.1e-23 113.6 103 56.3
MELO3C031411.2 Cucumis melo HOM05D000544 ORTHO05D169468 5.7e-09 66.6 38 78.9
CAN.G464.7 Capsicum annuum HOM05D001455 ORTHO05D001587 1.4e-07 62.0 69 43.5
MELO3C029166.2 Cucumis melo HOM05D005813 ORTHO05D009576 3.1e-07 60.8 37 70.3


User provided reference genes

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