Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055429.1 Olea europaea HOM05D002473 ORTHO05D002666 0.0e+00 1198.7 604 100.0
Oeu061048.2 Olea europaea HOM05D002473 ORTHO05D002666 7.0e-76 289.3 591 36.5
Migut.F00115 Erythranthe guttata HOM05D002473 ORTHO05D002666 1.2e-62 245.4 420 39.3
Nitab4.5_0002691g0020 Nicotiana tabacum HOM05D002473 ORTHO05D002666 6.3e-61 239.6 394 40.9
Dinv29186 Davidia involucrata HOM05D002473 ORTHO05D002666 1.7e-58 231.5 464 34.9
CAN.G303.64 Capsicum annuum HOM05D002473 ORTHO05D002666 2.1e-56 224.6 432 37.0
Peaxi162Scf01650g00048 Petunia axillaris HOM05D002473 ORTHO05D002666 1.7e-53 214.9 412 37.4
Actinidia08725 Actinidia chinensis HOM05D002473 ORTHO05D002666 1.5e-49 201.8 513 31.6
Hma1.2p1_1235F.1_g269200 Hydrangea macrophylla HOM05D002473 ORTHO05D002666 1.9e-49 201.4 436 34.4
Sopen03g027540 Solanum pennellii HOM05D002473 ORTHO05D002666 6.8e-47 193.0 416 35.8
SGA_v2.0_scaffold44G16876 Striga asiatica HOM05D002473 ORTHO05D002666 1.5e-46 191.8 224 47.8
SalBow4G0609 Salvia bowleyana HOM05D002473 ORTHO05D002666 4.4e-46 190.3 289 40.1
Solyc03g096800.4 Solanum lycopersicum HOM05D002473 ORTHO05D002666 5.8e-46 189.9 306 41.2
Cc02_g00540 Coffea canephora HOM05D002473 ORTHO05D002666 1.9e-41 174.9 340 38.2
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 1.8e-39 168.3 272 37.5
TAR374G0959 Trochodendron aralioides HOM05D002473 ORTHO05D002666 5.2e-39 166.8 475 32.8
Actinidia34292 Actinidia chinensis HOM05D002473 ORTHO05D002666 8.9e-39 166.0 523 29.1
Nitab4.5_0000021g0250 Nicotiana tabacum HOM05D002473 ORTHO05D002666 2.9e-37 161.0 464 31.7
Rhsim03G0218800 Rhododendron simsii HOM05D002473 ORTHO05D002666 3.7e-37 160.6 392 33.9
Potri.012G004000 Populus trichocarpa HOM05D002473 ORTHO05D002666 6.4e-37 159.8 244 42.2
Sabra12G0000100 Salix brachista HOM05D002473 ORTHO05D002666 1.7e-34 151.8 226 43.4
ECA246G2041 Erigeron canadensis HOM05D002473 ORTHO05D002666 6.6e-34 149.8 390 30.0
TWI63G0487 Tripterygium wilfordii HOM05D002473 ORTHO05D002666 9.5e-33 146.0 225 40.4
vmacro06479 Vaccinium macrocarpon HOM05D002473 ORTHO05D002666 4.7e-32 143.7 444 32.0
HanXRQChr01g0002711 Helianthus annuus HOM05D002473 ORTHO05D002666 1.4e-31 142.1 353 31.2
HanXRQChr09g0252091 Helianthus annuus HOM05D002473 ORTHO05D002666 1.4e-31 142.1 353 31.2
DCAR_020395 Daucus carota HOM05D002473 ORTHO05D002666 1.8e-31 141.7 548 29.2
Manes.05G196600 Manihot esculenta HOM05D002473 ORTHO05D002666 3.1e-31 141.0 171 42.7
Nn3g18727 Nelumbo nucifera HOM05D002473 ORTHO05D002666 1.2e-30 139.0 181 46.4
LjContig00155g0003282 Lotus japonicus HOM05D002473 ORTHO05D002666 2.9e-29 134.4 411 30.4
Lsat_1_v5_gn_6_117360 Lactuca sativa HOM05D002473 ORTHO05D002666 7.8e-27 126.3 574 27.0
Medtr5g068580 Medicago truncatula HOM05D002473 ORTHO05D002666 1.0e-26 125.9 219 38.4
Sabra15G0000100 Salix brachista HOM05D002473 ORTHO05D002666 1.9e-25 121.7 633 26.9
Ca_05546_v3 Cicer arietinum L. HOM05D002473 ORTHO05D002666 7.3e-25 119.8 408 28.7
arahy.Tifrunner.gnm1.ann1.0H0ATF Arachis hypogaea HOM05D002473 ORTHO05D002666 1.4e-23 115.5 568 25.4
Psat2g059960 Pisum sativum HOM05D002473 ORTHO05D002666 1.5e-22 112.1 469 27.3
Zm00001eb268500 Zea mays HOM05D002473 ORTHO05D002666 2.6e-22 111.3 158 39.2
Atru.ctg794.3 Acer truncatum HOM05D002473 ORTHO05D002666 3.4e-22 110.9 297 31.0
Os06g0103800 Oryza sativa ssp. japonica HOM05D002473 ORTHO05D002666 3.4e-22 110.9 175 37.7
Atru.ctg794.6 Acer truncatum HOM05D002473 ORTHO05D002666 7.6e-22 109.8 251 33.5
PSO782G1712 Papaver somniferum HOM05D002473 ORTHO05D002666 7.6e-22 109.8 184 39.1
TPR.G5852 Trifolium pratense HOM05D002473 ORTHO05D002666 7.6e-22 109.8 414 26.8
Atru.chr12.2513 Acer truncatum HOM05D002473 ORTHO05D002666 9.9e-22 109.4 297 30.6
Glyma.04G225300 Glycine max HOM05D002473 ORTHO05D002666 9.9e-22 109.4 181 38.1
Aqoxy5G04405 Aquilegia oxysepala HOM05D002473 ORTHO05D002666 1.7e-21 108.6 414 27.3
PSO063G6136 Papaver somniferum HOM05D002473 ORTHO05D002666 1.7e-21 108.6 141 46.1
CDE02G0758 Ceratophyllum demersum HOM05D002473 ORTHO05D002666 2.2e-21 108.2 144 45.8
Eucgr.A00980 Eucalyptus grandis HOM05D002473 ORTHO05D002666 2.9e-21 107.8 180 41.7
Phvul.008G187600 Phaseolus vulgaris HOM05D002473 ORTHO05D002666 6.4e-21 106.7 308 30.2
Glyma.14G187300 Glycine max HOM05D002473 ORTHO05D002666 8.4e-21 106.3 429 26.8
VMungo0647G0973 Vigna mungo HOM05D002473 ORTHO05D002666 1.4e-20 105.5 161 41.6
Haze_19386 Corylus avellana HOM05D002473 ORTHO05D002666 1.9e-20 105.1 171 40.4
CDE04G1268 Ceratophyllum demersum HOM05D002473 ORTHO05D002666 9.3e-20 102.8 224 34.4
Glyma.02G220500 Glycine max HOM05D002473 ORTHO05D002666 1.2e-19 102.4 226 32.7
Ciclev10019325m.g Citrus clementina HOM05D002473 ORTHO05D002666 2.1e-19 101.7 246 33.7
THA.LOC104811916 Tarenaya hassleriana HOM05D002473 ORTHO05D002666 1.7e-18 98.6 303 31.0
Thecc.03G212700 Theobroma cacao HOM05D002473 ORTHO05D002666 2.3e-18 98.2 171 37.4
HPP92_025865 Vanilla planifolia HOM05D000474 ORTHO05D006736 3.0e-18 97.8 226 30.1
unitig_52.g17700 Utricularia gibba HOM05D002473 ORTHO05D002666 8.7e-18 96.3 175 36.6
COL.COLO4_14404 Corchorus olitorius HOM05D002473 ORTHO05D002666 9.6e-17 92.8 237 32.1
Aa31sc34G10 Aethionema arabicum HOM05D002473 ORTHO05D002666 4.8e-16 90.5 249 32.9
PGR042G3103 Punica granatum HOM05D002473 ORTHO05D002666 1.1e-15 89.4 142 42.3
Dinv19176 Davidia involucrata HOM05D002473 ORTHO05D002666 5.3e-15 87.0 161 36.6
Gohir.D12G245100 Gossypium hirsutum HOM05D002473 ORTHO05D002666 5.3e-15 87.0 140 40.7
Gorai.008G262700 Gossypium raimondii HOM05D002473 ORTHO05D002666 5.3e-15 87.0 134 38.8
EL10Ac3g05123 Beta vulgaris HOM05D002473 ORTHO05D002666 9.0e-15 86.3 125 40.0
AL7G24770 Arabidopsis lyrata HOM05D002473 ORTHO05D002666 1.5e-14 85.5 168 33.9
Sc19g0000350 Simmondsia chinensis HOM05D002473 ORTHO05D002666 2.0e-14 85.1 142 40.8
Duzib084G1402 Durio zibethinus HOM05D002473 ORTHO05D002666 2.6e-14 84.7 171 35.1
arahy.Tifrunner.gnm1.ann1.MWN8UA Arachis hypogaea HOM05D002473 ORTHO05D002666 3.4e-14 84.3 548 25.0
ATR0197G007 Amborella trichopoda HOM05D002473 ORTHO05D002666 4.4e-14 84.0 204 32.8
AT4G27870 Arabidopsis thaliana HOM05D002473 ORTHO05D002666 5.8e-14 83.6 211 30.3
C01p24240 Brassica napus HOM05D002473 ORTHO05D002666 7.6e-14 83.2 222 28.8
BolC1t02380H Brassica oleracea HOM05D002473 ORTHO05D002666 7.6e-14 83.2 222 28.8
Thhalv10024497m.g Eutrema salsugineum HOM05D002473 ORTHO05D002666 1.3e-13 82.4 227 28.2
Lalb_Chr08g0239371 Lupinus albus HOM05D002473 ORTHO05D002666 1.3e-13 82.4 229 28.4
BcaNung01616 Brassica carinata HOM05D002473 ORTHO05D002666 1.7e-13 82.0 392 27.6
CARHR235570 Cardamine hirsuta HOM05D002473 ORTHO05D002666 6.4e-13 80.1 402 25.9
ATR0620G053 Amborella trichopoda HOM05D002473 ORTHO05D002666 1.9e-12 78.6 201 29.4
BcaC09g50532 Brassica carinata HOM05D002473 ORTHO05D002666 1.9e-12 78.6 383 27.4
Carub.0007s1295 Capsella rubella HOM05D002473 ORTHO05D002666 2.4e-12 78.2 376 25.0
Sp7g25840 Schrenkiella parvula HOM05D002473 ORTHO05D002666 3.2e-12 77.8 166 31.9
A01p19290 Brassica napus HOM05D002473 ORTHO05D002666 9.3e-12 76.3 407 25.6
BraA01t01870Z Brassica rapa HOM05D002473 ORTHO05D002666 1.2e-11 75.9 406 25.6
Gohir.A12G244200 Gossypium hirsutum HOM05D002473 ORTHO05D002666 1.6e-11 75.5 336 27.1
THA.LOC104798903 Tarenaya hassleriana HOM05D002473 ORTHO05D002666 2.7e-11 74.7 255 27.5
SEGI_11548 Sequoiadendron giganteum HOM05D002473 ORTHO05D002666 1.3e-10 72.4 243 28.0
Cpa.g.sc3.194 Carica papaya HOM05D002473 ORTHO05D002666 3.9e-10 70.9 81 49.4
SMO347G0454 Selaginella moellendorffii HOM05D002473 ORTHO05D002666 5.1e-10 70.5 163 31.3
Ah.13g071120 Amaranthus hybridus HOM05D002473 ORTHO05D002666 6.6e-10 70.1 119 36.1
AUR62005939 Chenopodium quinoa HOM05D002473 ORTHO05D002666 3.3e-09 67.8 346 26.0
Pp3c20_17480 Physcomitrium patens HOM05D002473 ORTHO05D002666 4.3e-09 67.4 251 26.7
AUR62028124 Chenopodium quinoa HOM05D002473 ORTHO05D002666 3.6e-08 64.3 48 56.2
DCAR_004738 Daucus carota HOM05D002473 ORTHO05D002666 3.6e-08 64.3 169 31.4
AagrBONN_evm.TU.Sc2ySwM_344.2403 Anthoceros agrestis HOM05D002473 ORTHO05D002666 4.0e-07 60.8 112 37.5
CSS0007068 Camellia sinensis var. sinensis HOM05D002473 ORTHO05D002666 4.0e-07 60.8 84 44.0
CARHR189210 Cardamine hirsuta HOM05D002473 ORTHO05D002666 6.9e-07 60.1 132 30.3
DCAR_004737 Daucus carota HOM05D002473 ORTHO05D002666 9.0e-07 59.7 208 26.0
Carub.0006s2206 Capsella rubella HOM05D002473 ORTHO05D002666 1.2e-06 59.3 129 30.2
Mapoly0059s0053 Marchantia polymorpha HOM05D002473 ORTHO05D002666 1.2e-06 59.3 39 66.7
Oeu009712.1 Olea europaea HOM05D002473 ORTHO05D002666 2.0e-06 58.5 140 27.9
Eucgr.A00981 Eucalyptus grandis HOM05D002473 ORTHO05D002666 2.6e-06 58.2 108 34.3
PGSC0003DMG400027948 Solanum tuberosum HOM05D002473 ORTHO05D002666 4.5e-06 57.4 156 30.1
Thhalv10004019m.g Eutrema salsugineum HOM05D002473 ORTHO05D002666 5.8e-06 57.0 111 33.3
Mapoly0056s0072 Marchantia polymorpha HOM05D002473 ORTHO05D002666 5.8e-06 57.0 124 32.3
Pp3c23_5510 Physcomitrium patens HOM05D002473 ORTHO05D002666 5.8e-06 57.0 45 55.6
Actinidia39433 Actinidia chinensis HOM05D002473 ORTHO05D002666 9.9e-06 56.2 185 28.1
MD05G1171900 Malus domestica HOM05D002473 ORTHO05D002666 9.9e-06 56.2 196 26.5


User provided reference genes

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