Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055335.1 Olea europaea HOM05D001739 ORTHO05D004575 1.5e-273 945.7 520 100.0
Dinv25554 Davidia involucrata HOM05D001739 ORTHO05D004575 6.7e-51 206.1 163 69.9
MSTRG.5982 Avicennia marina HOM05D001739 ORTHO05D004575 1.5e-50 204.9 162 67.9
Peaxi162Scf00191g01112 Petunia axillaris HOM05D001739 ORTHO05D004575 1.5e-50 204.9 161 70.2
Nitab4.5_0001565g0110 Nicotiana tabacum HOM05D001739 ORTHO05D004575 1.9e-50 204.5 161 69.6
SGA_v2.0_scaffold281G46906 Striga asiatica HOM05D001739 ORTHO05D004575 5.7e-50 203.0 176 65.3
Solyc07g042380.4 Solanum lycopersicum HOM05D001739 ORTHO05D004575 1.6e-49 201.4 164 66.5
Sopen07g021980 Solanum pennellii HOM05D001739 ORTHO05D004575 1.4e-48 198.4 164 65.2
vmacro17095 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.4e-48 198.4 163 68.7
Thecc.09G071800 Theobroma cacao HOM05D001739 ORTHO05D004575 6.9e-48 196.1 162 68.5
vmacro17113 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.5e-47 194.9 163 68.7
CAN.G63.12 Capsicum annuum HOM05D001739 ORTHO05D004575 3.4e-47 193.7 164 64.6
Sabra18G0055900 Salix brachista HOM05D001739 ORTHO05D004575 3.4e-47 193.7 161 68.3
vmacro17096 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 3.4e-47 193.7 161 68.9
Gohir.A07G016500 Gossypium hirsutum HOM05D001739 ORTHO05D004575 4.5e-47 193.4 163 68.1
vmacro23083 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 4.5e-47 193.4 160 69.4
Migut.J00896 Erythranthe guttata HOM05D001739 ORTHO05D004575 5.9e-47 193.0 164 66.5
vmacro23084 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 5.9e-47 193.0 163 67.5
Gorai.001G017100 Gossypium raimondii HOM05D001739 ORTHO05D004575 7.6e-47 192.6 163 67.5
Manes.16G091500 Manihot esculenta HOM05D001739 ORTHO05D004575 7.6e-47 192.6 159 67.3
COL.COLO4_21223 Corchorus olitorius HOM05D001739 ORTHO05D004575 1.0e-46 192.2 179 60.3
Gohir.D07G016300 Gossypium hirsutum HOM05D001739 ORTHO05D004575 1.0e-46 192.2 163 67.5
Lj7C690T11 Lonicera japonica HOM05D001739 ORTHO05D004575 1.0e-46 192.2 163 66.9
Duzib168G0208 Durio zibethinus HOM05D001739 ORTHO05D004575 1.3e-46 191.8 162 66.7
TAR383G0739 Trochodendron aralioides HOM05D001739 ORTHO05D004575 1.3e-46 191.8 163 66.3
Potri.006G137900 Populus trichocarpa HOM05D001739 ORTHO05D004575 2.9e-46 190.7 161 66.5
Rhsim05G0003800 Rhododendron simsii HOM05D001739 ORTHO05D004575 2.9e-46 190.7 163 67.5
DCAR_003861 Daucus carota HOM05D001739 ORTHO05D004575 3.8e-46 190.3 162 66.7
Ciclev10023308m.g Citrus clementina HOM05D001739 ORTHO05D004575 5.0e-46 189.9 163 66.9
DCAR_005064 Daucus carota HOM05D001739 ORTHO05D004575 8.5e-46 189.1 162 66.7
Cc06_g12580 Coffea canephora HOM05D001739 ORTHO05D004575 1.1e-45 188.7 175 61.1
Cpa.g.sc32.6 Carica papaya HOM05D001739 ORTHO05D004575 1.9e-45 188.0 176 62.5
Atru.chr7.1751 Acer truncatum HOM05D001739 ORTHO05D004575 2.5e-45 187.6 162 66.7
PGR142G3865 Punica granatum HOM05D001739 ORTHO05D004575 7.2e-45 186.0 163 63.8
Ah.09g229240 Amaranthus hybridus HOM05D001739 ORTHO05D004575 2.1e-44 184.5 163 62.0
Eucgr.C00777 Eucalyptus grandis HOM05D001739 ORTHO05D004575 2.1e-44 184.5 160 63.1
TWI32G0648 Tripterygium wilfordii HOM05D001739 ORTHO05D004575 2.1e-44 184.5 162 67.3
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla HOM05D001739 ORTHO05D004575 2.7e-44 184.1 179 60.3
MD02G1099100 Malus domestica HOM05D001739 ORTHO05D004575 3.9e-43 180.3 189 57.7
MD15G1221900 Malus domestica HOM05D001739 ORTHO05D004575 3.9e-43 180.3 181 58.0
CAN.G333.13 Capsicum annuum HOM05D001739 ORTHO05D004575 6.7e-43 179.5 157 66.2
EL10Ac8g19018 Beta vulgaris HOM05D001739 ORTHO05D004575 1.1e-42 178.7 163 60.7
THA.LOC104809049 Tarenaya hassleriana HOM05D001739 ORTHO05D004575 1.5e-42 178.3 158 67.1
GSVIVG01023097001 Vitis vinifera HOM05D001739 ORTHO05D004575 1.9e-42 177.9 161 63.4
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea HOM05D001739 ORTHO05D004575 2.5e-42 177.6 150 65.3
Aqoxy7G03292 Aquilegia oxysepala HOM05D001739 ORTHO05D004575 5.7e-42 176.4 188 56.9
Sc18g0003470 Simmondsia chinensis HOM05D001739 ORTHO05D004575 5.7e-42 176.4 162 61.1
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea HOM05D001739 ORTHO05D004575 1.6e-41 174.9 169 60.9
unitig_744.g24652 Utricularia gibba HOM05D001739 ORTHO05D004575 2.2e-41 174.5 164 62.8
PSO421G0331 Papaver somniferum HOM05D001739 ORTHO05D004575 3.7e-41 173.7 163 60.7
Haze_26051 Corylus avellana HOM05D001739 ORTHO05D004575 6.3e-41 172.9 156 64.7
FvH4_1g09210 Fragaria vesca HOM05D001739 ORTHO05D004575 8.2e-41 172.6 157 59.9
FAN26G1120 Fragaria x ananassa HOM05D001739 ORTHO05D004575 8.2e-41 172.6 157 59.9
FAN28G0236 Fragaria x ananassa HOM05D001739 ORTHO05D004575 8.2e-41 172.6 157 59.9
FAN28G1182 Fragaria x ananassa HOM05D001739 ORTHO05D004575 8.2e-41 172.6 157 59.9
Prupe.7G193800 Prunus persica HOM05D001739 ORTHO05D004575 8.2e-41 172.6 185 55.1
Sc24g0001530 Simmondsia chinensis HOM05D001739 ORTHO05D004575 1.1e-40 172.2 162 60.5
FAN19G0975 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.4e-40 171.8 157 59.9
PSO104G0064 Papaver somniferum HOM05D001739 ORTHO05D004575 1.4e-40 171.8 159 61.6
FAN23G1590 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.4e-40 171.0 157 59.2
FAN26G0091 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.4e-40 171.0 157 59.2
Cfa002954 Carpinus fangiana HOM05D001739 ORTHO05D004575 3.1e-40 170.6 156 64.1
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 3.1e-40 170.6 151 64.9
RcHm_v2.0_Chr2g0095731 Rosa chinensis HOM05D001739 ORTHO05D004575 4.1e-40 170.2 163 59.5
ECA240G3214 Erigeron canadensis HOM05D001739 ORTHO05D004575 1.2e-39 168.7 160 58.1
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea HOM05D001739 ORTHO05D004575 2.0e-39 167.9 171 57.3
CiPaw.03G202600 Carya illinoinensis HOM05D001739 ORTHO05D004575 2.6e-39 167.5 175 58.9
Lalb_Chr12g0200311 Lupinus albus HOM05D001739 ORTHO05D004575 2.6e-39 167.5 150 64.0
Nn8g40294 Nelumbo nucifera HOM05D001739 ORTHO05D004575 3.4e-39 167.2 163 58.3
QL11p002157 Quercus lobata HOM05D001739 ORTHO05D004575 3.4e-39 167.2 157 64.3
Prupe.6G204300 Prunus persica HOM05D001739 ORTHO05D004575 4.5e-39 166.8 185 54.1
Prupe.6G204500 Prunus persica HOM05D001739 ORTHO05D004575 4.5e-39 166.8 185 54.1
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 7.7e-39 166.0 152 63.2
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 1.0e-38 165.6 153 62.7
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 1.3e-38 165.2 150 61.3
HanXRQChr09g0273551 Helianthus annuus HOM05D001739 ORTHO05D004575 1.3e-38 165.2 172 55.8
Lsat_1_v5_gn_7_35381 Lactuca sativa HOM05D001739 ORTHO05D004575 1.3e-38 165.2 183 54.1
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea HOM05D001739 ORTHO05D004575 6.5e-38 162.9 171 56.1
Sed0004150 Sechium edule HOM05D001739 ORTHO05D004575 6.5e-38 162.9 168 57.7
MELO3C015548.2 Cucumis melo HOM05D001739 ORTHO05D004575 8.5e-38 162.5 160 61.2
CsaV3_1G041350 Cucumis sativus L. HOM05D001739 ORTHO05D004575 1.1e-37 162.2 160 61.2
CANSAT56G3462 Cannabis sativa HOM05D001739 ORTHO05D004575 1.9e-37 161.4 174 54.0
ClCG03G014800 Citrullus lanatus HOM05D001739 ORTHO05D004575 2.5e-37 161.0 163 60.1
Hund23253 Selenicereus undatus HOM05D001739 ORTHO05D004575 2.5e-37 161.0 160 59.4
AT2G34357 Arabidopsis thaliana HOM05D001739 ORTHO05D004575 3.2e-37 160.6 180 53.3
BcaB02g09558 Brassica carinata HOM05D001739 ORTHO05D004575 4.2e-37 160.2 174 55.7
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 4.2e-37 160.2 150 62.0
Sed0021617 Sechium edule HOM05D001739 ORTHO05D004575 7.2e-37 159.5 159 58.5
CSS0017458 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D004575 6.1e-36 156.4 162 56.8
CARHR128440 Cardamine hirsuta HOM05D001739 ORTHO05D004575 6.1e-36 156.4 194 49.0
BolC4t23047H Brassica oleracea HOM05D001739 ORTHO05D004575 7.9e-36 156.0 176 54.5
Thhalv10016153m.g Eutrema salsugineum HOM05D001739 ORTHO05D004575 7.9e-36 156.0 193 51.3
Ca_09790_v3 Cicer arietinum L. HOM05D001739 ORTHO05D004575 1.0e-35 155.6 181 55.8
A05p11320 Brassica napus HOM05D001739 ORTHO05D004575 1.4e-35 155.2 176 53.4
HanXRQChr04g0122381 Helianthus annuus HOM05D001739 ORTHO05D004575 1.4e-35 155.2 172 54.1
Psat6g134600 Pisum sativum HOM05D001739 ORTHO05D004575 1.4e-35 155.2 176 54.0
AL4G30320 Arabidopsis lyrata HOM05D001739 ORTHO05D004575 1.8e-35 154.8 177 49.7
C03p22320 Brassica napus HOM05D001739 ORTHO05D004575 1.8e-35 154.8 179 53.6
C04p14660 Brassica napus HOM05D001739 ORTHO05D004575 1.8e-35 154.8 176 54.0
TPR.G18558 Trifolium pratense HOM05D001739 ORTHO05D004575 1.8e-35 154.8 181 55.8
HPP92_004359 Vanilla planifolia HOM05D001739 ORTHO05D004575 1.8e-35 154.8 178 50.0
BcaB01g03896 Brassica carinata HOM05D001739 ORTHO05D004575 2.3e-35 154.5 178 52.2
BcaC01g05798 Brassica carinata HOM05D001739 ORTHO05D004575 2.3e-35 154.5 181 53.0
A03p19100 Brassica napus HOM05D001739 ORTHO05D004575 2.3e-35 154.5 181 53.0
BolC3t14614H Brassica oleracea HOM05D001739 ORTHO05D004575 2.3e-35 154.5 181 53.0
BraA03t11167Z Brassica rapa HOM05D001739 ORTHO05D004575 3.0e-35 154.1 181 53.0
Medtr1g072890 Medicago truncatula HOM05D001739 ORTHO05D004575 3.9e-35 153.7 165 57.6
Sp4g16630 Schrenkiella parvula HOM05D001739 ORTHO05D004575 5.1e-35 153.3 144 61.8
Aa31LG9G14080 Aethionema arabicum HOM05D001739 ORTHO05D004575 6.7e-35 152.9 161 58.4
Carub.0004s1602 Capsella rubella HOM05D001739 ORTHO05D004575 7.4e-34 149.4 181 52.5
Medtr1g072970 Medicago truncatula HOM05D001739 ORTHO05D004575 9.7e-34 149.1 155 57.4
Os02g0782100 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D004575 2.2e-33 147.9 161 52.8
AUR62025277 Chenopodium quinoa HOM05D001739 ORTHO05D004575 4.8e-33 146.7 156 54.5
TPR.G34376 Trifolium pratense HOM05D001739 ORTHO05D004575 8.2e-33 146.0 178 53.9
Nitab4.5_0007773g0020 Nicotiana tabacum HOM05D001739 ORTHO05D004575 2.4e-32 144.4 125 65.6
arahy.Tifrunner.gnm1.ann1.S2P6Y8 Arachis hypogaea HOM05D001739 ORTHO05D004575 3.4e-31 140.6 181 50.3
Psat7g002920 Pisum sativum HOM05D001739 ORTHO05D004575 3.4e-31 140.6 142 60.6
CDE04G0230 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 2.9e-30 137.5 162 50.6
AUR62039592 Chenopodium quinoa HOM05D001739 ORTHO05D004575 6.5e-30 136.3 158 51.3
AUR62019633 Chenopodium quinoa HOM05D001739 ORTHO05D004575 4.2e-29 133.7 158 49.4
Zm00001eb257110 Zea mays HOM05D001739 ORTHO05D004575 9.4e-29 132.5 165 47.3
SEGI_25708 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 1.2e-28 132.1 192 44.3
BcaC02g11606 Brassica carinata HOM05D001739 ORTHO05D004575 2.7e-28 131.0 122 61.5
AUR62028281 Chenopodium quinoa HOM05D001739 ORTHO05D004575 5.2e-27 126.7 159 47.8
BcaC02g11500 Brassica carinata HOM05D001739 ORTHO05D004575 3.3e-26 124.0 114 64.0
C04p13350 Brassica napus HOM05D001739 ORTHO05D004575 9.7e-26 122.5 117 59.8
SHI02769 Sapria himalayana HOM05D001739 ORTHO05D004575 1.1e-24 119.0 162 46.3
ATR0681G226 Amborella trichopoda HOM05D001739 ORTHO05D004575 5.3e-24 116.7 202 42.1
Pp3c2_3190 Physcomitrium patens HOM05D001739 ORTHO05D004575 5.9e-23 113.2 178 41.0
ATR0681G387 Amborella trichopoda HOM05D001739 ORTHO05D004575 1.1e-21 109.0 160 43.1
Dinv30816 Davidia involucrata HOM05D001739 ORTHO05D004575 4.7e-20 103.6 105 58.1
SMO361G0459 Selaginella moellendorffii HOM05D001739 ORTHO05D004575 1.3e-17 95.5 167 38.3
Mapoly0061s0020 Marchantia polymorpha HOM05D001739 ORTHO05D004575 2.4e-16 91.3 179 37.4
CDE12G0121 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 1.3e-14 85.5 69 62.3
CBR_g11184 Chara braunii HOM05D001739 ORTHO05D004575 6.5e-14 83.2 162 38.3
HanXRQChr10g0281301 Helianthus annuus HOM05D001739 ORTHO05D004575 9.8e-10 69.3 84 48.8
Zm00001eb173780 Zea mays HOM05D001739 ORTHO05D004575 1.3e-06 58.9 78 43.6


User provided reference genes

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