Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 4.9e-182 641.0 311 100.0
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 9.3e-141 503.8 337 77.2
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.2e-140 503.4 337 76.9
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 6.3e-105 384.8 338 62.1
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 1.1e-104 384.0 336 61.3
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 1.4e-104 383.6 335 60.9
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 8.2e-97 357.8 298 61.7
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 1.5e-95 353.6 263 66.9
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 3.8e-94 349.0 344 54.7
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 7.2e-93 344.7 221 73.8
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 6.1e-92 341.7 342 54.4
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 6.1e-92 341.7 258 65.5
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 6.7e-91 338.2 302 59.6
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 2.0e-90 336.7 294 59.2
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 3.3e-90 335.9 295 59.3
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 5.7e-90 335.1 294 59.2
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 9.7e-90 334.3 330 53.9
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 9.7e-90 334.3 317 57.7
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.2e-89 333.2 261 63.2
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 2.8e-89 332.8 223 70.4
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 2.8e-89 332.8 264 62.1
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 3.7e-89 332.4 224 68.8
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 3.7e-89 332.4 348 55.7
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 6.3e-89 331.6 291 60.1
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 8.2e-89 331.3 291 59.8
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 8.2e-89 331.3 247 65.2
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.1e-88 330.9 264 62.9
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.4e-88 330.5 256 63.3
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 1.4e-88 330.5 263 63.9
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 2.4e-88 329.7 262 63.0
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 9.1e-88 327.8 326 52.5
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 1.6e-87 327.0 308 56.2
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 2.0e-87 326.6 264 63.6
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 3.5e-87 325.9 264 62.5
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 1.7e-86 323.6 328 54.9
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 2.2e-86 323.2 260 62.7
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 2.9e-86 322.8 284 58.8
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 2.5e-85 319.7 262 61.8
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 2.5e-85 319.7 289 57.8
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 7.2e-85 318.2 293 56.0
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 7.2e-85 318.2 233 64.8
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 4.7e-84 315.5 308 55.5
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 6.1e-84 315.1 291 56.7
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 6.1e-84 315.1 284 59.2
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 8.0e-84 314.7 222 68.5
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 1.0e-83 314.3 283 59.4
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 1.8e-83 313.5 305 55.7
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 1.8e-83 313.5 209 68.4
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 4.0e-83 312.4 340 51.2
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 6.8e-83 311.6 261 59.0
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 6.8e-83 311.6 223 69.1
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 6.8e-83 311.6 325 54.8
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.6e-82 309.7 262 59.5
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 2.6e-82 309.7 288 57.3
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 4.4e-82 308.9 229 65.1
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 5.7e-82 308.5 290 57.2
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 9.7e-82 307.8 261 58.6
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 2.2e-81 306.6 291 55.0
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 2.2e-81 306.6 227 66.1
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 2.8e-81 306.2 275 58.2
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 8.3e-81 304.7 222 64.9
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 8.3e-81 304.7 231 64.9
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 1.1e-80 304.3 205 70.2
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.1e-80 304.3 205 70.2
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.1e-80 304.3 205 70.2
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 1.1e-80 304.3 273 58.6
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.8e-80 303.5 205 70.2
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 1.8e-80 303.5 229 67.2
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 2.4e-80 303.1 289 54.3
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 2.4e-80 303.1 250 62.0
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 4.1e-80 302.4 284 56.0
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 5.3e-80 302.0 291 54.6
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 5.3e-80 302.0 227 63.9
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 7.0e-80 301.6 206 67.5
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 7.0e-80 301.6 250 61.6
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 9.1e-80 301.2 282 58.2
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 9.1e-80 301.2 249 62.7
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 1.2e-79 300.8 226 64.2
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 2.0e-79 300.1 243 60.9
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 2.7e-79 299.7 345 49.3
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 3.5e-79 299.3 350 48.6
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 5.9e-79 298.5 232 64.2
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 7.7e-79 298.1 264 59.1
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 7.7e-79 298.1 226 66.4
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 1.0e-78 297.7 232 64.2
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 2.2e-78 296.6 222 61.7
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 5.0e-78 295.4 206 67.0
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 5.0e-78 295.4 206 67.0
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 6.5e-78 295.0 236 59.3
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 8.5e-78 294.7 224 60.7
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 8.5e-78 294.7 217 65.4
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 3.2e-77 292.7 206 65.5
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 4.2e-77 292.4 227 60.8
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 4.2e-77 292.4 227 60.8
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 4.2e-77 292.4 272 57.0
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 4.2e-77 292.4 241 58.1
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 5.5e-77 292.0 227 60.8
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 7.2e-77 291.6 222 62.6
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 3.6e-76 289.3 294 53.4
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 4.7e-76 288.9 263 55.9
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 1.0e-75 287.7 207 63.8
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 1.0e-75 287.7 207 63.8
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.8e-75 287.0 233 61.4
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 5.2e-75 285.4 231 59.7
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 5.2e-75 285.4 263 55.5
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 1.2e-74 284.3 207 64.7
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 1.2e-74 284.3 207 64.7
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 2.6e-74 283.1 263 55.9
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 2.6e-74 283.1 194 68.0
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 3.4e-74 282.7 207 63.3
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 6.3e-73 278.5 227 59.5
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 3.1e-72 276.2 222 56.8
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 3.1e-72 276.2 209 60.3
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 4.1e-72 275.8 276 54.0
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 7.0e-72 275.0 292 52.4
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 2.0e-71 273.5 287 52.6
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 7.7e-71 271.6 241 57.7
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.3e-70 270.0 214 58.4
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 2.7e-63 246.5 220 52.3
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 5.6e-61 238.8 238 53.4
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 4.7e-60 235.7 245 48.2
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 1.8e-59 233.8 199 53.8
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.0e-58 230.3 151 71.5
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 5.8e-58 228.8 153 69.3
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 3.7e-57 226.1 124 80.6
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 2.7e-55 219.9 166 59.0
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 5.0e-54 215.7 131 74.8
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 5.6e-53 212.2 156 65.4
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 6.8e-51 205.3 153 67.3
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 1.2e-50 204.5 264 43.2
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 5.6e-45 185.7 189 56.1
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 2.7e-39 166.8 157 53.5
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 3.4e-34 149.8 146 53.4
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 4.9e-33 146.0 170 40.6
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 3.2e-32 143.3 171 49.1
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 3.2e-24 116.7 154 46.8
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.1e-19 101.7 117 44.4
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 7.6e-18 95.5 167 38.9
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 9.9e-18 95.1 132 43.9
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 9.3e-16 88.6 108 48.1
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 6.0e-15 85.9 86 44.2
Oeu021232.1 Olea europaea HOM05D005195 ORTHO05D006088 7.4e-13 79.0 153 38.6
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 6.9e-11 72.4 63 57.1
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 2.2e-09 67.4 108 42.6
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 3.8e-09 66.6 96 44.8
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 5.1e-06 56.2 51 54.9


User provided reference genes

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