Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055107.1 Olea europaea HOM05D001860 ORTHO05D004239 2.2e-162 575.5 279 100.0
Oeu028274.1 Olea europaea HOM05D001860 ORTHO05D004239 2.3e-66 256.5 235 63.0
Nitab4.5_0004623g0030 Nicotiana tabacum HOM05D001860 ORTHO05D004239 1.8e-47 193.7 252 50.0
vmacro01266 Vaccinium macrocarpon HOM05D001860 ORTHO05D004239 5.0e-45 185.7 242 49.6
MSTRG.714 Avicennia marina HOM05D001860 ORTHO05D004239 6.5e-45 185.3 215 55.8
Migut.L01274 Erythranthe guttata HOM05D001860 ORTHO05D004239 1.9e-44 183.7 217 50.7
Hma1.2p1_1079F.1_g254980 Hydrangea macrophylla HOM05D001860 ORTHO05D004239 2.1e-43 180.3 239 48.1
SGA_v2.0_scaffold172G38958 Striga asiatica HOM05D001860 ORTHO05D004239 6.1e-43 178.7 213 50.2
Nitab4.5_0000040g0150 Nicotiana tabacum HOM05D001860 ORTHO05D004239 1.3e-40 171.0 228 50.0
Peaxi162Scf00222g00063 Petunia axillaris HOM05D001860 ORTHO05D004239 6.3e-40 168.7 227 49.3
Dinv34137 Davidia involucrata HOM05D001860 ORTHO05D004239 1.4e-39 167.5 218 51.8
PGSC0003DMG400018432 Solanum tuberosum HOM05D001860 ORTHO05D004239 7.0e-39 165.2 213 51.2
Sopen05g003680 Solanum pennellii HOM05D001860 ORTHO05D004239 2.0e-38 163.7 214 51.4
CAN.G1596.4 Capsicum annuum HOM05D001860 ORTHO05D004239 5.9e-38 162.2 228 50.0
Actinidia33208 Actinidia chinensis HOM05D001860 ORTHO05D004239 1.5e-36 157.5 194 50.5
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 5.6e-36 155.6 232 44.8
Duzib268G0034 Durio zibethinus HOM05D001860 ORTHO05D004239 7.3e-36 155.2 226 44.7
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 3.4e-33 146.4 235 42.6
Eucgr.B03212 Eucalyptus grandis HOM05D001860 ORTHO05D004239 2.2e-32 143.7 249 41.4
Actinidia12295 Actinidia chinensis HOM05D001860 ORTHO05D004239 1.8e-31 140.6 224 46.4
Rhsim12G0064500 Rhododendron simsii HOM05D001860 ORTHO05D004239 5.4e-31 139.0 365 33.4
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.6e-30 137.5 242 40.9
arahy.Tifrunner.gnm1.ann1.RS14VD Arachis hypogaea HOM05D001860 ORTHO05D004239 2.0e-30 137.1 241 42.3
ECA233G2043 Erigeron canadensis HOM05D001860 ORTHO05D004239 2.0e-30 137.1 217 41.5
ClCG05G024140 Citrullus lanatus HOM05D001860 ORTHO05D004239 7.8e-30 135.2 240 38.3
CsaV3_5G032880 Cucumis sativus L. HOM05D001860 ORTHO05D004239 1.0e-29 134.8 242 39.3
Lsat_1_v5_gn_3_52080 Lactuca sativa HOM05D001860 ORTHO05D004239 1.0e-29 134.8 217 41.5
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.3e-29 133.7 244 39.3
EL10Ac6g13235 Beta vulgaris HOM05D001860 ORTHO05D004239 6.6e-29 132.1 212 41.5
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 4.3e-28 129.4 246 39.0
Sc11g0002050 Simmondsia chinensis HOM05D001860 ORTHO05D004239 5.6e-28 129.0 209 43.1
Sed0006733 Sechium edule HOM05D001860 ORTHO05D004239 1.2e-27 127.9 231 36.8
PGR119G0060 Punica granatum HOM05D001860 ORTHO05D004239 1.6e-27 127.5 226 39.8
TWI79G1540 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 3.6e-27 126.3 237 41.4
Prupe.1G276800 Prunus persica HOM05D001860 ORTHO05D004239 8.0e-27 125.2 233 38.6
AUR62005815 Chenopodium quinoa HOM05D001860 ORTHO05D004239 1.4e-26 124.4 212 39.2
Medtr5g041750 Medicago truncatula HOM05D001860 ORTHO05D004239 1.4e-26 124.4 242 37.2
AUR62032809 Chenopodium quinoa HOM05D001860 ORTHO05D004239 2.3e-26 123.6 210 38.1
Actinidia19882 Actinidia chinensis HOM05D001860 ORTHO05D004239 6.8e-26 122.1 229 39.7
Hund25223 Selenicereus undatus HOM05D001860 ORTHO05D004239 6.8e-26 122.1 215 39.5
Lsat_1_v5_gn_3_52060 Lactuca sativa HOM05D001860 ORTHO05D004239 5.8e-25 119.0 210 40.5
MD13G1070100 Malus domestica HOM05D001860 ORTHO05D004239 1.7e-24 117.5 215 38.1
Psat2g116800 Pisum sativum HOM05D001860 ORTHO05D004239 2.2e-24 117.1 235 37.9
Thecc.02G343600 Theobroma cacao HOM05D001860 ORTHO05D004239 8.3e-24 115.2 217 41.0
Gohir.D13G076300 Gossypium hirsutum HOM05D001860 ORTHO05D004239 3.2e-23 113.2 217 39.6
ECA246G2415 Erigeron canadensis HOM05D001860 ORTHO05D004239 4.1e-23 112.8 194 41.8
CANSAT64G2374 Cannabis sativa HOM05D001860 ORTHO05D004239 7.0e-23 112.1 212 38.7
THA.LOC104805168 Tarenaya hassleriana HOM05D001860 ORTHO05D004239 7.0e-23 112.1 222 38.3
MD16G1070500 Malus domestica HOM05D001860 ORTHO05D004239 1.2e-22 111.3 213 37.1
Ciclev10031680m.g Citrus clementina HOM05D001860 ORTHO05D004239 4.6e-22 109.4 217 40.6
Gohir.A13G076600 Gossypium hirsutum HOM05D001860 ORTHO05D004239 7.8e-22 108.6 217 38.7
Glyma.01G050400 Glycine max HOM05D001860 ORTHO05D004239 2.3e-21 107.1 217 38.2
Haze_11993 Corylus avellana HOM05D001860 ORTHO05D004239 1.5e-20 104.4 151 44.4
Lj2g0002980 Lotus japonicus HOM05D001860 ORTHO05D004239 2.5e-20 103.6 219 37.0
HanXRQChr17g0545271 Helianthus annuus HOM05D001860 ORTHO05D004239 7.3e-20 102.1 185 41.6
arahy.Tifrunner.gnm1.ann1.A2Z21V Arachis hypogaea HOM05D001860 ORTHO05D004239 1.2e-19 101.3 145 42.1
TAR374G0160 Trochodendron aralioides HOM05D000974 ORTHO05D004239 1.2e-19 101.3 215 37.7
Duzib251G0636 Durio zibethinus HOM05D001860 ORTHO05D004239 1.6e-19 100.9 217 37.8
HanXRQChr08g0210801 Helianthus annuus HOM05D001860 ORTHO05D004239 1.6e-19 100.9 189 40.2
TWI75G1461 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 1.4e-18 97.8 212 36.3
Ca_04821_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004239 3.1e-18 96.7 150 38.0
Aqoxy3G03435 Aquilegia oxysepala HOM05D001860 ORTHO05D004239 4.0e-18 96.3 200 38.5
Glyma.02G109200 Glycine max HOM05D001860 ORTHO05D004239 5.2e-18 95.9 218 36.2
Phvul.002G083400 Phaseolus vulgaris HOM05D001860 ORTHO05D004239 6.8e-18 95.5 219 37.4
TAR315G0003 Trochodendron aralioides HOM05D001860 ORTHO05D004239 8.9e-18 95.1 199 40.7
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 5.8e-17 92.4 75 64.0
MBI05_g10767_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004239 7.5e-17 92.0 237 36.3
VMungo1215G3190 Vigna mungo HOM05D001860 ORTHO05D004239 1.7e-16 90.9 214 35.0
Oeu021059.3 Olea europaea HOM05D001860 ORTHO05D004239 5.4e-15 85.9 160 36.2
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 7.1e-15 85.5 123 44.7
TAR622G0370 Trochodendron aralioides HOM05D001860 ORTHO05D004239 2.7e-14 83.6 200 36.5
Oeu005752.1 Olea europaea HOM05D001860 ORTHO05D004239 1.7e-13 80.9 87 58.6
Os10g0406200 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004239 1.7e-13 80.9 214 34.1
Lj6A786T63 Lonicera japonica HOM05D001860 ORTHO05D004239 3.9e-13 79.7 120 43.3
TWI31G0976 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 3.9e-13 79.7 208 33.2
Lj6A786T64 Lonicera japonica HOM05D001860 ORTHO05D004239 8.6e-13 78.6 90 53.3
Ah.03g134870 Amaranthus hybridus HOM05D001860 ORTHO05D004239 1.9e-12 77.4 211 33.6
Atru.chr11.1761 Acer truncatum HOM05D001860 ORTHO05D004239 4.3e-12 76.3 139 38.8
unitig_747.g21181 Utricularia gibba HOM05D001860 ORTHO05D004239 7.3e-12 75.5 117 43.6
TPR.G39239 Trifolium pratense HOM05D001860 ORTHO05D004239 3.6e-11 73.2 74 45.9
Zm00001eb223270 Zea mays HOM05D001860 ORTHO05D004239 4.7e-11 72.8 218 32.6
QL03p068530 Quercus lobata HOM05D001860 ORTHO05D004239 4.0e-10 69.7 120 40.8
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 5.2e-10 69.3 114 43.9
Dinv14593 Davidia involucrata HOM05D001860 ORTHO05D004239 6.8e-10 68.9 223 31.8
Duzib128G1505 Durio zibethinus HOM05D001860 ORTHO05D004239 6.8e-10 68.9 196 32.7
Cc00_g21790 Coffea canephora HOM05D001860 ORTHO05D004239 2.0e-09 67.4 89 49.4
Cc11_g12820 Coffea canephora HOM05D001860 ORTHO05D004239 2.0e-09 67.4 89 49.4
PSO339G1927 Papaver somniferum HOM05D001860 ORTHO05D004239 2.0e-09 67.4 224 30.8
A09p62390 Brassica napus HOM05D001860 ORTHO05D004239 2.6e-09 67.0 123 38.2
CSS0043167 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004239 3.4e-09 66.6 81 50.6
Nn7g35793 Nelumbo nucifera HOM05D001860 ORTHO05D004239 3.4e-09 66.6 197 32.0
BraA09t41604Z Brassica rapa HOM05D001860 ORTHO05D004239 4.4e-09 66.2 125 36.0
Gohir.D11G249300 Gossypium hirsutum HOM05D001860 ORTHO05D004239 4.4e-09 66.2 228 28.9
Cpa.g.sc350.3 Carica papaya HOM05D001860 ORTHO05D004239 5.8e-09 65.9 118 39.0
BcaC07g41595 Brassica carinata HOM05D001860 ORTHO05D004239 7.6e-09 65.5 125 36.0
C08p45960 Brassica napus HOM05D001860 ORTHO05D004239 7.6e-09 65.5 123 39.8
BolC8t52147H Brassica oleracea HOM05D001860 ORTHO05D004239 7.6e-09 65.5 123 39.8
MBI19_g24078_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004239 7.6e-09 65.5 195 30.3
CARHR014580 Cardamine hirsuta HOM05D001860 ORTHO05D004239 9.9e-09 65.1 208 28.8
Gohir.A11G239600 Gossypium hirsutum HOM05D001860 ORTHO05D004239 9.9e-09 65.1 228 28.5
Actinidia27672 Actinidia chinensis HOM05D001860 ORTHO05D004239 1.7e-08 64.3 76 55.3
Duzib106G1690 Durio zibethinus HOM05D001860 ORTHO05D004239 2.2e-08 63.9 229 28.8
Sp1g12520 Schrenkiella parvula HOM05D001860 ORTHO05D004239 2.2e-08 63.9 208 29.3
Carub.0001s1385 Capsella rubella HOM05D001860 ORTHO05D004239 2.9e-08 63.5 208 28.4
Gorai.007G267000 Gossypium raimondii HOM05D001860 ORTHO05D004239 2.9e-08 63.5 240 30.4
Thecc.05G258500 Theobroma cacao HOM05D001860 ORTHO05D004239 2.9e-08 63.5 232 30.6
Manes.05G104000 Manihot esculenta HOM05D001860 ORTHO05D004239 3.8e-08 63.2 211 31.3
BcaB08g34374 Brassica carinata HOM05D001860 ORTHO05D004239 6.4e-08 62.4 70 47.1
BcaC07g41592 Brassica carinata HOM05D001860 ORTHO05D004239 6.4e-08 62.4 119 36.1
Cpa.g.sc51.86 Carica papaya HOM05D001860 ORTHO05D004239 1.1e-07 61.6 242 29.8
QL03p068534 Quercus lobata HOM05D001860 ORTHO05D004239 1.4e-07 61.2 95 46.3
RcHm_v2.0_Chr4g0439521 Rosa chinensis HOM05D001860 ORTHO05D004239 1.4e-07 61.2 85 44.7
Thhalv10008532m.g Eutrema salsugineum HOM05D001860 ORTHO05D004239 1.9e-07 60.8 205 27.8
Lj2A356T44 Lonicera japonica HOM05D001860 ORTHO05D004239 2.4e-07 60.5 223 30.0
CDE04G0155 Ceratophyllum demersum HOM05D001860 ORTHO05D004239 3.2e-07 60.1 194 29.9
AL1G26050 Arabidopsis lyrata HOM05D001860 ORTHO05D004239 4.1e-07 59.7 71 46.5
TAR623G1369 Trochodendron aralioides HOM05D001860 ORTHO05D004239 4.1e-07 59.7 191 30.4
AT1G14180 Arabidopsis thaliana HOM05D001860 ORTHO05D004239 5.4e-07 59.3 71 46.5
CDE07G1998 Ceratophyllum demersum HOM05D001860 ORTHO05D004239 5.4e-07 59.3 193 30.6
CAN.G1596.6 Capsicum annuum HOM05D001860 ORTHO05D004239 1.2e-06 58.2 85 50.6
Nn2g15907 Nelumbo nucifera HOM05D001860 ORTHO05D004239 1.2e-06 58.2 191 31.4
TAR369G0797 Trochodendron aralioides HOM05D001860 ORTHO05D004239 1.2e-06 58.2 202 28.7
A06p10170 Brassica napus HOM05D001860 ORTHO05D004239 1.6e-06 57.8 137 33.6
Dinv16665 Davidia involucrata HOM05D001860 ORTHO05D004239 4.6e-06 56.2 77 48.1
ATR0564G267 Amborella trichopoda HOM05D001860 ORTHO05D004239 6.0e-06 55.8 108 39.8
Cpa.g.sc350.2 Carica papaya HOM05D001860 ORTHO05D004239 7.8e-06 55.5 76 47.4
Solyc05g007820.4 Solanum lycopersicum HOM05D001860 ORTHO05D004239 7.8e-06 55.5 71 54.9


User provided reference genes

Program Settings