Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055095.2 Olea europaea HOM05D005225 ORTHO05D006830 3.5e-258 894.4 450 100.0
SalBow2G3373 Salvia bowleyana HOM05D005225 ORTHO05D006830 3.0e-201 705.3 442 77.6
MSTRG.7736 Avicennia marina HOM05D005225 ORTHO05D006830 2.0e-200 702.6 445 77.3
Dinv34052 Davidia involucrata HOM05D005225 ORTHO05D006830 1.7e-199 699.5 440 78.6
Nitab4.5_0007734g0040 Nicotiana tabacum HOM05D005225 ORTHO05D006830 5.4e-198 694.5 440 77.5
Nitab4.5_0000231g0060 Nicotiana tabacum HOM05D005225 ORTHO05D006830 3.5e-197 691.8 440 76.4
Sopen05g006880 Solanum pennellii HOM05D005225 ORTHO05D006830 4.5e-197 691.4 440 75.5
PGSC0003DMG400028362 Solanum tuberosum HOM05D005225 ORTHO05D006830 3.8e-196 688.3 440 75.7
Peaxi162Scf00175g00052 Petunia axillaris HOM05D005225 ORTHO05D006830 6.5e-196 687.6 440 75.9
Cpa.g.sc1.153 Carica papaya HOM05D005225 ORTHO05D006830 2.5e-195 685.6 436 76.8
Cc11_g11810 Coffea canephora HOM05D005225 ORTHO05D006830 1.2e-194 683.3 437 76.7
CAN.G707.21 Capsicum annuum HOM05D005225 ORTHO05D006830 2.1e-194 682.6 440 74.3
Potri.008G097400 Populus trichocarpa HOM05D005225 ORTHO05D006830 2.1e-194 682.6 442 75.3
RcHm_v2.0_Chr7g0212391 Rosa chinensis HOM05D005225 ORTHO05D006830 2.1e-194 682.6 444 75.9
Ciclev10031260m.g Citrus clementina HOM05D005225 ORTHO05D006830 2.8e-194 682.2 439 75.4
Migut.L01174 Erythranthe guttata HOM05D005225 ORTHO05D006830 8.0e-194 680.6 443 73.8
Sabra08G0073600 Salix brachista HOM05D005225 ORTHO05D006830 2.3e-193 679.1 442 74.7
Thecc.02G327800 Theobroma cacao HOM05D005225 ORTHO05D006830 8.9e-193 677.2 437 76.0
Cfa008863 Carpinus fangiana HOM05D005225 ORTHO05D006830 2.6e-192 675.6 442 75.1
DCAR_004043 Daucus carota HOM05D005225 ORTHO05D006830 5.7e-192 674.5 443 73.8
FvH4_4g10620 Fragaria vesca HOM05D005225 ORTHO05D006830 7.5e-192 674.1 444 75.0
FAN12G0824 Fragaria x ananassa HOM05D005225 ORTHO05D006830 2.2e-191 672.5 444 74.5
Atru.chr11.1603 Acer truncatum HOM05D005225 ORTHO05D006830 2.8e-191 672.2 437 73.2
arahy.Tifrunner.gnm1.ann1.BYWX90 Arachis hypogaea HOM05D005225 ORTHO05D006830 2.8e-191 672.2 442 74.2
Haze_11886 Corylus avellana HOM05D005225 ORTHO05D006830 2.8e-191 672.2 442 75.1
Duzib251G0330 Durio zibethinus HOM05D005225 ORTHO05D006830 4.9e-191 671.4 440 75.0
FAN12G2267 Fragaria x ananassa HOM05D005225 ORTHO05D006830 1.1e-190 670.2 444 74.5
arahy.Tifrunner.gnm1.ann1.BAL663 Arachis hypogaea HOM05D005225 ORTHO05D006830 1.4e-190 669.8 442 74.0
COL.COLO4_27858 Corchorus olitorius HOM05D005225 ORTHO05D006830 1.8e-190 669.5 438 74.7
Lalb_Chr04g0255551 Lupinus albus HOM05D005225 ORTHO05D006830 4.1e-190 668.3 442 74.4
Rhsim09G0126000 Rhododendron simsii HOM05D005225 ORTHO05D006830 4.1e-190 668.3 442 74.4
CSS0003869 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 5.4e-190 667.9 440 73.9
arahy.Tifrunner.gnm1.ann1.1IY8V2 Arachis hypogaea HOM05D005225 ORTHO05D006830 1.6e-189 666.4 442 73.8
arahy.Tifrunner.gnm1.ann1.W47LMS Arachis hypogaea HOM05D005225 ORTHO05D006830 2.0e-189 666.0 442 73.5
HanXRQChr12g0375111 Helianthus annuus HOM05D005225 ORTHO05D006830 2.7e-189 665.6 439 74.5
QL03p073750 Quercus lobata HOM05D005225 ORTHO05D006830 2.7e-189 665.6 442 73.8
vmacro01311 Vaccinium macrocarpon HOM05D005225 ORTHO05D006830 3.5e-189 665.2 440 73.9
QL02p092646 Quercus lobata HOM05D005225 ORTHO05D006830 1.3e-188 663.3 442 73.8
Hma1.2p1_0051F.1_g029440 Hydrangea macrophylla HOM05D005225 ORTHO05D006830 5.0e-188 661.4 444 72.5
VMungo1215G0332 Vigna mungo HOM05D005225 ORTHO05D006830 8.6e-188 660.6 443 74.0
Gorai.008G176100 Gossypium raimondii HOM05D005225 ORTHO05D006830 1.1e-187 660.2 440 74.1
CiPaw.06G093200 Carya illinoinensis HOM05D005225 ORTHO05D006830 1.9e-187 659.4 442 74.2
PGR102G0586 Punica granatum HOM05D005225 ORTHO05D006830 1.9e-187 659.4 442 71.9
Manes.10G001000 Manihot esculenta HOM05D005225 ORTHO05D006830 5.6e-187 657.9 440 72.5
Hund25165 Selenicereus undatus HOM05D005225 ORTHO05D006830 5.6e-187 657.9 441 72.6
Glyma.02G120400 Glycine max HOM05D005225 ORTHO05D006830 4.7e-186 654.8 446 73.1
MD16G1281400 Malus domestica HOM05D005225 ORTHO05D006830 8.0e-186 654.1 450 70.9
PSO017G1582 Papaver somniferum HOM05D005225 ORTHO05D006830 8.0e-186 654.1 442 71.9
Prupe.1G566200 Prunus persica HOM05D005225 ORTHO05D006830 1.0e-185 653.7 442 71.9
Ah.03g138790 Amaranthus hybridus HOM05D005225 ORTHO05D006830 1.8e-185 652.9 439 72.0
Eucgr.F03034 Eucalyptus grandis HOM05D005225 ORTHO05D006830 3.0e-185 652.1 443 72.0
Aqoxy6G03037 Aquilegia oxysepala HOM05D005225 ORTHO05D006830 1.2e-184 650.2 443 71.1
ECA246G3793 Erigeron canadensis HOM05D005225 ORTHO05D006830 1.2e-184 650.2 441 72.3
TWI79G0826 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 2.0e-184 649.4 442 70.8
Psat2g131720 Pisum sativum HOM05D005225 ORTHO05D006830 4.4e-184 648.3 442 72.2
TWI75G0045 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 4.4e-184 648.3 442 71.3
ClCG11G000950 Citrullus lanatus HOM05D005225 ORTHO05D006830 5.8e-184 647.9 442 70.4
Lj2g0003273 Lotus japonicus HOM05D005225 ORTHO05D006830 9.8e-184 647.1 442 71.0
Sed0018680 Sechium edule HOM05D005225 ORTHO05D006830 9.8e-184 647.1 440 70.9
CANSAT80G1664 Cannabis sativa HOM05D005225 ORTHO05D006830 2.9e-183 645.6 442 71.5
HanXRQChr03g0092011 Helianthus annuus HOM05D005225 ORTHO05D006830 2.9e-183 645.6 441 73.0
Ca_05000_v3 Cicer arietinum L. HOM05D005225 ORTHO05D006830 8.3e-183 644.0 444 70.3
Medtr5g044980 Medicago truncatula HOM05D005225 ORTHO05D006830 1.9e-182 642.9 440 70.7
TPR.G23155 Trifolium pratense HOM05D005225 ORTHO05D006830 4.1e-182 641.7 442 70.8
MELO3C020077.2 Cucumis melo HOM05D005225 ORTHO05D006830 5.4e-182 641.3 442 69.9
CsaV3_5G008630 Cucumis sativus L. HOM05D005225 ORTHO05D006830 9.2e-182 640.6 442 70.1
Sc04g0007480 Simmondsia chinensis HOM05D005225 ORTHO05D006830 1.2e-181 640.2 440 71.6
AUR62003082 Chenopodium quinoa HOM05D005225 ORTHO05D006830 2.0e-181 639.4 442 70.1
Lj3P1029T28 Lonicera japonica HOM05D005225 ORTHO05D006830 3.5e-181 638.6 440 71.1
MBI16_g03095_MAGBIO Magnolia biondii HOM05D005225 ORTHO05D006830 1.0e-180 637.1 443 69.1
Lsat_1_v5_gn_3_53701 Lactuca sativa HOM05D005225 ORTHO05D006830 2.3e-180 636.0 441 70.5
TPR.G23738 Trifolium pratense HOM05D005225 ORTHO05D006830 2.3e-180 636.0 442 70.4
unitig_22.g6894 Utricularia gibba HOM05D005225 ORTHO05D006830 3.9e-180 635.2 440 69.8
GSVIVG01012238001 Vitis vinifera HOM05D005225 ORTHO05D006830 1.1e-179 633.6 442 72.2
Carub.0007s1065 Capsella rubella HOM05D005225 ORTHO05D006830 5.6e-179 631.3 442 68.6
AT4G30000 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 1.2e-178 630.2 442 68.1
THA.LOC104821999 Tarenaya hassleriana HOM05D005225 ORTHO05D006830 3.6e-178 628.6 439 69.9
BraA01t00759Z Brassica rapa HOM05D005225 ORTHO05D006830 1.4e-177 626.7 441 67.6
AL7G22240 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 2.3e-177 625.9 442 67.4
A01p08120 Brassica napus HOM05D005225 ORTHO05D006830 5.2e-177 624.8 441 66.7
Nn8g41224 Nelumbo nucifera HOM05D005225 ORTHO05D006830 2.6e-176 622.5 411 72.7
BcaC09g51778 Brassica carinata HOM05D005225 ORTHO05D006830 3.4e-176 622.1 441 66.9
C01p09090 Brassica napus HOM05D005225 ORTHO05D006830 3.4e-176 622.1 441 66.9
BolC1t00900H Brassica oleracea HOM05D005225 ORTHO05D006830 3.4e-176 622.1 441 66.9
Lalb_Chr10g0098931 Lupinus albus HOM05D005225 ORTHO05D006830 9.8e-176 620.5 442 70.4
Sp7g27800 Schrenkiella parvula HOM05D005225 ORTHO05D006830 9.8e-176 620.5 442 67.0
Aa31LG2G20560 Aethionema arabicum HOM05D005225 ORTHO05D006830 1.3e-175 620.2 442 67.0
Thhalv10024845m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 4.9e-175 618.2 442 67.6
CARHR237920 Cardamine hirsuta HOM05D005225 ORTHO05D006830 1.4e-174 616.7 440 67.0
Thhalv10019460m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 3.2e-174 615.5 441 67.8
FAN17G1346 Fragaria x ananassa HOM05D005225 ORTHO05D006830 1.0e-172 610.5 409 74.3
Sp5g24250 Schrenkiella parvula HOM05D005225 ORTHO05D006830 1.3e-172 610.1 442 67.2
Gohir.A12G160100 Gossypium hirsutum HOM05D005225 ORTHO05D006830 3.3e-171 605.5 437 69.8
EL10Ac6g15018 Beta vulgaris HOM05D005225 ORTHO05D006830 4.3e-171 605.1 417 71.5
AT1G69190 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 7.3e-171 604.4 444 66.4
AL2G28280 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 9.5e-171 604.0 445 65.8
Os07g0618500 Oryza sativa ssp. japonica HOM05D005225 ORTHO05D006830 3.6e-170 602.1 436 65.1
Gohir.D12G163500 Gossypium hirsutum HOM05D005225 ORTHO05D006830 5.2e-169 598.2 440 68.9
HPP92_017786 Vanilla planifolia HOM05D005225 ORTHO05D006830 1.7e-167 593.2 441 66.4
FAN07G1983 Fragaria x ananassa HOM05D005225 ORTHO05D006830 4.6e-165 585.1 390 74.4
SGA_v2.0_scaffold85G26791 Striga asiatica HOM05D005225 ORTHO05D006830 1.0e-164 583.9 448 65.4
Zm00001eb319990 Zea mays HOM05D005225 ORTHO05D006830 1.0e-164 583.9 442 62.2
ATR0827G107 Amborella trichopoda HOM05D005225 ORTHO05D006830 1.5e-160 570.1 439 65.8
SEGI_35565 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 3.4e-160 568.9 436 63.8
TAR629G1144 Trochodendron aralioides HOM05D005225 ORTHO05D006830 8.4e-159 564.3 444 65.1
CSS0031076 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 7.1e-158 561.2 440 64.8
Aa31sc367G20 Aethionema arabicum HOM05D005225 ORTHO05D006830 3.5e-157 558.9 444 62.6
Solyc05g012090.4 Solanum lycopersicum HOM05D005225 ORTHO05D006830 2.4e-153 546.2 351 74.4
SHI01330 Sapria himalayana HOM05D005225 ORTHO05D006830 1.3e-151 540.4 437 63.6
MD06G1024100 Malus domestica HOM05D005225 ORTHO05D006830 3.5e-149 532.3 444 59.7
Actinidia00572 Actinidia chinensis HOM05D005225 ORTHO05D006830 1.3e-146 523.9 440 63.2
AagrBONN_evm.TU.Sc2ySwM_362.716 Anthoceros agrestis HOM05D005225 ORTHO05D006830 7.9e-141 504.6 448 55.6
Pp3c27_4310 Physcomitrium patens HOM05D005225 ORTHO05D006830 4.0e-137 492.3 437 55.8
RcHm_v2.0_Chr2g0139541 Rosa chinensis HOM05D005225 ORTHO05D006830 2.6e-136 489.6 320 75.6
Glyma.01G062200 Glycine max HOM05D005225 ORTHO05D006830 4.5e-136 488.8 348 71.0
Mapoly0021s0079 Marchantia polymorpha HOM05D005225 ORTHO05D006830 1.9e-131 473.4 429 55.7
AUR62007898 Chenopodium quinoa HOM05D005225 ORTHO05D006830 5.6e-131 471.9 339 67.8
Nn2g15478 Nelumbo nucifera HOM05D005225 ORTHO05D006830 2.8e-130 469.5 320 70.6
SEGI_04122 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 8.2e-130 468.0 436 56.0
Phvul.007G262101 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 3.0e-124 449.5 298 74.5
Phvul.001G131450 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 5.1e-124 448.7 298 74.2
SMO358G0268 Selaginella moellendorffii HOM05D005225 ORTHO05D006830 7.4e-123 444.9 441 50.1
SGA_v2.0_scaffold45G17115 Striga asiatica HOM05D001733 ORTHO05D001882 1.7e-111 407.1 383 55.9
CBR_g61480 Chara braunii HOM05D005225 ORTHO05D006830 6.1e-109 398.7 439 47.8
HanXRQChr04g0120931 Helianthus annuus HOM05D005225 ORTHO05D006830 7.7e-96 355.1 250 68.8
CDE04G0587 Ceratophyllum demersum HOM05D005225 ORTHO05D006830 8.3e-90 335.1 242 65.3
Cre10.g428550 Chlamydomonas reinhardtii HOM05D005225 ORTHO05D006830 1.9e-86 323.9 579 36.1
MCO11G893 Micromonas commoda HOM05D005225 ORTHO05D006830 6.1e-85 318.9 512 40.0
PRCOL_00003253 Prasinoderma coloniale HOM05D005225 ORTHO05D006830 8.0e-77 292.0 454 39.0
Cfa024768 Carpinus fangiana HOM05D005225 ORTHO05D124687 3.2e-73 280.0 435 41.1
Nn4g23480 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.4e-57 228.0 146 74.0
SGA_v2.0_scaffold16G07808 Striga asiatica HOM05D005225 ORTHO05D006830 3.4e-43 180.3 240 45.8
LjContig00272g0016968 Lotus japonicus HOM05D005225 ORTHO05D006830 8.7e-39 165.6 168 50.6
Nn4g23481 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.3e-37 161.8 108 76.9
Actinidia16153 Actinidia chinensis HOM05D005225 ORTHO05D006830 4.8e-37 159.8 308 38.0
SGA_v2.0_scaffold16G07809 Striga asiatica HOM05D005225 ORTHO05D048239 5.8e-35 152.9 118 62.7
TAR371G0727 Trochodendron aralioides HOM05D005225 ORTHO05D006830 3.5e-32 143.7 242 39.7
HanXRQChr04g0120941 Helianthus annuus HOM05D005225 ORTHO05D048239 6.6e-31 139.4 87 75.9
RcHm_v2.0_Chr2g0139531 Rosa chinensis HOM05D005225 ORTHO05D006830 1.0e-23 115.5 82 67.1
QL06p011620 Quercus lobata HOM05D005225 ORTHO05D006830 2.0e-19 101.3 68 75.0
CARHR062340 Cardamine hirsuta HOM05D005225 ORTHO05D006830 4.5e-19 100.1 69 65.2
HanXRQChr15g0477151 Helianthus annuus HOM05D005225 ORTHO05D044060 4.6e-16 90.1 58 74.1
Medtr0076s0050 Medicago truncatula HOM05D005225 ORTHO05D265034 1.5e-11 75.1 84 48.8
AUR62007899 Chenopodium quinoa HOM05D005225 ORTHO05D044060 2.7e-08 64.3 31 87.1


User provided reference genes

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