Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055079.1 Olea europaea HOM05D005042 ORTHO05D006080 6.7e-282 973.4 504 100.0
Oeu024162.6 Olea europaea HOM05D005042 ORTHO05D006080 1.5e-95 354.4 657 39.9
Oeu021807.1 Olea europaea HOM05D005042 ORTHO05D006080 4.6e-81 306.2 489 46.4
Oeu057419.1 Olea europaea HOM05D005042 ORTHO05D006080 9.6e-71 271.9 649 35.6
Cc11_g11610 Coffea canephora HOM05D005042 ORTHO05D006080 8.1e-70 268.9 602 37.9
Migut.E00252 Erythranthe guttata HOM05D005042 ORTHO05D006080 2.4e-69 267.3 493 41.4
SGA_v2.0_scaffold287G47187 Striga asiatica HOM05D005042 ORTHO05D006080 3.3e-63 246.9 618 36.1
ECA246G3902 Erigeron canadensis HOM05D005042 ORTHO05D006080 9.6e-63 245.4 511 38.9
vmacro01299 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 4.0e-61 240.0 587 37.0
Dinv34024 Davidia involucrata HOM05D005042 ORTHO05D006080 1.2e-60 238.4 701 33.0
Rhsim12G0071400 Rhododendron simsii HOM05D005042 ORTHO05D006080 7.6e-60 235.7 565 37.2
Lsat_1_v5_gn_3_106381 Lactuca sativa HOM05D005042 ORTHO05D006080 2.2e-59 234.2 489 38.2
Lj3A1027T86 Lonicera japonica HOM05D005042 ORTHO05D006080 1.5e-55 221.5 664 33.7
HanXRQChr17g0570091 Helianthus annuus HOM05D005042 ORTHO05D006080 1.9e-55 221.1 489 38.7
Manes.01G025000 Manihot esculenta HOM05D005042 ORTHO05D006080 2.8e-54 217.2 502 37.1
CSS0000751 Camellia sinensis var. sinensis HOM05D005042 ORTHO05D006080 7.6e-52 209.1 700 30.7
PGSC0003DMG400028304 Solanum tuberosum HOM05D005042 ORTHO05D006080 2.2e-51 207.6 551 34.7
Actinidia07770 Actinidia chinensis HOM05D005042 ORTHO05D006080 8.5e-51 205.7 660 32.0
CAN.G1021.3 Capsicum annuum HOM05D005042 ORTHO05D006080 1.1e-50 205.3 555 34.4
Solyc05g011930.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.6e-49 201.4 551 35.0
Eucgr.G02425 Eucalyptus grandis HOM05D005042 ORTHO05D006080 2.1e-49 201.1 560 34.5
Sopen05g006670 Solanum pennellii HOM05D005042 ORTHO05D006080 1.0e-48 198.7 550 34.9
Peaxi162Scf00188g01341 Petunia axillaris HOM05D005042 ORTHO05D006080 6.7e-48 196.1 538 34.4
Potri.008G109100 Populus trichocarpa HOM05D005042 ORTHO05D006080 6.7e-48 196.1 677 30.9
Potri.T155180 Populus trichocarpa HOM05D005042 ORTHO05D006080 6.7e-48 196.1 677 30.9
Nitab4.5_0012072g0010 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.5e-47 194.9 651 32.0
Solyc05g011950.3 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.9e-47 194.5 169 64.5
CANSAT11G1456 Cannabis sativa HOM05D005042 ORTHO05D006080 5.7e-47 193.0 223 54.3
EL10Ac6g14684 Beta vulgaris HOM05D005042 ORTHO05D006080 6.3e-46 189.5 581 33.7
Rhsim09G0122700 Rhododendron simsii HOM05D005042 ORTHO05D006080 3.1e-45 187.2 736 30.2
Hund25158 Selenicereus undatus HOM05D005042 ORTHO05D006080 5.3e-45 186.4 573 32.1
Nitab4.5_0000027g0180 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.2e-44 185.3 660 31.8
Potri.010G139100 Populus trichocarpa HOM05D005042 ORTHO05D006080 1.5e-44 184.9 497 35.4
CsaV3_6G033840 Cucumis sativus L. HOM05D005042 ORTHO05D006080 4.5e-44 183.3 168 63.7
TAR371G1247 Trochodendron aralioides HOM05D005042 ORTHO05D006080 4.5e-44 183.3 308 44.8
TAR726G0003 Trochodendron aralioides HOM05D005042 ORTHO05D006080 4.5e-44 183.3 200 58.5
unitig_62.g23700 Utricularia gibba HOM05D005042 ORTHO05D006080 4.5e-44 183.3 520 35.0
Prupe.1G292900 Prunus persica HOM05D005042 ORTHO05D006080 1.3e-43 181.8 519 33.9
COL.COLO4_27836 Corchorus olitorius HOM05D005042 ORTHO05D006080 8.5e-43 179.1 174 60.9
CiPaw.06G094600 Carya illinoinensis HOM05D005042 ORTHO05D006080 1.1e-42 178.7 520 33.3
Cfa008851 Carpinus fangiana HOM05D005042 ORTHO05D006080 3.2e-42 177.2 431 36.9
CDE10G0431 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 2.1e-41 174.5 539 33.0
vmacro10479 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 6.1e-41 172.9 722 30.2
Phvul.003G038600 Phaseolus vulgaris HOM05D005042 ORTHO05D006080 1.0e-40 172.2 579 32.0
MELO3C011406.2 Cucumis melo HOM05D005042 ORTHO05D006080 1.4e-40 171.8 359 39.6
AUR62007879 Chenopodium quinoa HOM05D005042 ORTHO05D006080 3.0e-40 170.6 330 39.1
CiPaw.05G122400 Carya illinoinensis HOM05D005042 ORTHO05D006080 3.9e-40 170.2 432 36.8
ClCG08G010560 Citrullus lanatus HOM05D005042 ORTHO05D006080 3.9e-40 170.2 203 53.7
Sopen05g006680 Solanum pennellii HOM05D000061 ORTHO05D000050 1.5e-39 168.3 154 63.0
Thecc.02G323700 Theobroma cacao HOM05D005042 ORTHO05D006080 5.7e-39 166.4 621 31.6
Aqoxy3G03731 Aquilegia oxysepala HOM05D005042 ORTHO05D006080 9.7e-39 165.6 445 36.2
PSO017G3437 Papaver somniferum HOM05D005042 ORTHO05D006080 2.2e-38 164.5 162 58.6
CAN.G1021.10 Capsicum annuum HOM05D005042 ORTHO05D006080 3.7e-38 163.7 210 49.5
PSO478G2238 Papaver somniferum HOM05D005042 ORTHO05D006080 6.3e-38 162.9 162 58.6
Lalb_Chr17g0341431 Lupinus albus HOM05D005042 ORTHO05D006080 8.2e-38 162.5 458 35.6
Lj2g0019338 Lotus japonicus HOM05D005042 ORTHO05D006080 1.4e-37 161.8 204 52.5
ATR0827G068 Amborella trichopoda HOM05D005042 ORTHO05D006080 1.8e-37 161.4 170 57.6
Haze_11871 Corylus avellana HOM05D005042 ORTHO05D006080 3.1e-37 160.6 278 44.6
MBI16_g07040_MAGBIO Magnolia biondii HOM05D005042 ORTHO05D006080 1.0e-35 155.6 172 56.4
Nn4g23527 Nelumbo nucifera HOM05D005042 ORTHO05D006080 2.2e-35 154.5 224 47.3
AUR62003064 Chenopodium quinoa HOM05D005042 ORTHO05D006080 2.9e-35 154.1 549 32.6
Atru.chr11.1578 Acer truncatum HOM05D005042 ORTHO05D006080 5.0e-35 153.3 417 37.2
THA.LOC104821992 Tarenaya hassleriana HOM05D005042 ORTHO05D006080 7.2e-34 149.4 170 57.6
HPP92_000883 Vanilla planifolia HOM05D005042 ORTHO05D006080 7.2e-34 149.4 187 51.3
CAN.G1021.18 Capsicum annuum HOM05D005042 ORTHO05D006080 2.7e-33 147.5 138 59.4
TWI31G0262 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 8.0e-33 146.0 476 33.4
SEGI_40784 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 1.4e-32 145.2 166 51.8
Glyma.02G122200 Glycine max HOM05D005042 ORTHO05D006080 3.9e-32 143.7 380 37.4
Cpa.g.sc1.165 Carica papaya HOM05D005042 ORTHO05D006080 8.8e-32 142.5 667 27.6
VMungo1215G3453 Vigna mungo HOM05D005042 ORTHO05D006080 2.6e-31 141.0 134 62.7
Gohir.A05G306900 Gossypium hirsutum HOM05D005042 ORTHO05D006080 5.7e-31 139.8 201 47.8
Sabra08G0082800 Salix brachista HOM05D005042 ORTHO05D006080 7.4e-31 139.4 693 27.7
Duzib251G0840 Durio zibethinus HOM05D005042 ORTHO05D006080 1.7e-30 138.3 618 30.1
Psat2g093520 Pisum sativum HOM05D005042 ORTHO05D006080 2.2e-30 137.9 176 50.0
Aa31LG4G11790 Aethionema arabicum HOM05D005042 ORTHO05D006080 4.8e-30 136.7 200 46.0
DCAR_030054 Daucus carota HOM05D005042 ORTHO05D006080 6.3e-30 136.3 231 41.6
Dinv15584 Davidia involucrata HOM05D000485 ORTHO05D000341 6.3e-30 136.3 571 28.9
FAN07G1705 Fragaria x ananassa HOM05D005042 ORTHO05D006080 6.3e-30 136.3 494 32.6
MD16G1056300 Malus domestica HOM05D005042 ORTHO05D006080 8.2e-30 136.0 463 32.0
FAN17G2893 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.4e-29 135.2 494 31.6
TPR.G34179 Trifolium pratense HOM05D005042 ORTHO05D006080 1.4e-29 135.2 167 50.3
Lsat_1_v5_gn_4_25561 Lactuca sativa HOM05D005042 ORTHO05D006080 3.1e-29 134.0 161 50.9
Medtr5g047140 Medicago truncatula HOM05D005042 ORTHO05D006080 3.1e-29 134.0 191 46.6
ECA234G0547 Erigeron canadensis HOM05D005042 ORTHO05D006080 9.1e-29 132.5 170 47.6
Lalb_Chr10g0099121 Lupinus albus HOM05D005042 ORTHO05D006080 1.2e-28 132.1 422 33.6
arahy.Tifrunner.gnm1.ann1.L0BNS4 Arachis hypogaea HOM05D005042 ORTHO05D006080 2.6e-28 131.0 111 64.0
Pp3c1_680 Physcomitrium patens HOM05D005042 ORTHO05D006080 4.5e-28 130.2 171 48.0
CAN.G1021.19 Capsicum annuum HOM05D005042 ORTHO05D006080 7.7e-28 129.4 144 54.2
TPR.G38503 Trifolium pratense HOM05D005042 ORTHO05D006080 1.0e-27 129.0 500 30.4
AagrBONN_evm.TU.Sc2ySwM_117.2775 Anthoceros agrestis HOM05D005042 ORTHO05D006080 1.7e-27 128.3 170 47.6
Gohir.D05G307200 Gossypium hirsutum HOM05D005042 ORTHO05D006080 3.8e-27 127.1 201 45.8
TWI79G1206 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 3.8e-27 127.1 649 28.7
FvH4_4g29350 Fragaria vesca HOM05D005042 ORTHO05D006080 6.5e-27 126.3 510 31.0
FAN22G1919 Fragaria x ananassa HOM05D005042 ORTHO05D006080 6.5e-27 126.3 493 31.2
Gorai.009G327100 Gossypium raimondii HOM05D005042 ORTHO05D006080 6.5e-27 126.3 201 45.8
AT1G69060 Arabidopsis thaliana HOM05D005042 ORTHO05D006080 1.1e-26 125.6 345 34.2
QL05p008217 Quercus lobata HOM05D005042 ORTHO05D006080 1.1e-26 125.6 200 44.0
FAN12G1549 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.5e-26 125.2 510 31.0
RcHm_v2.0_Chr4g0437421 Rosa chinensis HOM05D005042 ORTHO05D006080 2.5e-26 124.4 489 31.7
DCAR_007205 Daucus carota HOM05D005042 ORTHO05D006080 5.5e-26 123.2 491 29.9
HanXRQChr16g0527171 Helianthus annuus HOM05D005042 ORTHO05D006080 5.5e-26 123.2 224 42.4
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea HOM05D005042 ORTHO05D006080 7.2e-26 122.9 564 28.2
Ca_05058_v3 Cicer arietinum L. HOM05D005042 ORTHO05D006080 1.6e-25 121.7 509 28.3
DCAR_023741 Daucus carota HOM05D005042 ORTHO05D006080 3.6e-25 120.6 101 65.3
CAN.G1021.20 Capsicum annuum HOM05D005042 ORTHO05D006080 4.7e-25 120.2 144 50.0
TPR.G37754 Trifolium pratense HOM05D005042 ORTHO05D006080 4.7e-25 120.2 539 29.3
CARHR061940 Cardamine hirsuta HOM05D005042 ORTHO05D006080 1.0e-24 119.0 160 50.0
Ciclev10030834m.g Citrus clementina HOM05D005042 ORTHO05D006080 2.3e-24 117.9 692 26.2
PSO063G2731 Papaver somniferum HOM05D005042 ORTHO05D006080 6.7e-24 116.3 175 48.0
Pp3c2_29040 Physcomitrium patens HOM05D005042 ORTHO05D006080 6.7e-24 116.3 195 41.5
PGR119G2532 Punica granatum HOM05D005042 ORTHO05D006080 1.2e-23 115.5 363 33.1
PSO782G3512 Papaver somniferum HOM05D005042 ORTHO05D006080 2.6e-23 114.4 179 46.9
CDE10G0071 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 3.3e-23 114.0 98 63.3
SEGI_37091 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 3.3e-23 114.0 275 38.2
Glyma.01G064400 Glycine max HOM05D005042 ORTHO05D006080 1.3e-22 112.1 224 40.6
PGSC0003DMG400028305 Solanum tuberosum HOM05D005042 ORTHO05D006080 1.3e-22 112.1 89 66.3
MD13G1056900 Malus domestica HOM05D005042 ORTHO05D006080 1.7e-22 111.7 458 31.2
Zm00001eb057530 Zea mays HOM05D005042 ORTHO05D006080 1.7e-22 111.7 165 49.1
CAN.G1021.24 Capsicum annuum HOM05D005042 ORTHO05D006080 1.1e-21 109.0 133 50.4
Solyc05g011960.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.4e-21 108.6 89 62.9
TAR629G0517 Trochodendron aralioides HOM05D005042 ORTHO05D006080 1.4e-21 108.6 703 26.3
Sabra10G0107300 Salix brachista HOM05D005042 ORTHO05D006080 2.4e-21 107.8 456 31.1
Sopen05g006700 Solanum pennellii HOM05D005042 ORTHO05D006080 9.1e-21 105.9 89 60.7
Sc04g0007390 Simmondsia chinensis HOM05D005042 ORTHO05D006080 2.0e-20 104.8 566 25.6
GSVIVG01012257001 Vitis vinifera HOM05D005042 ORTHO05D006080 4.5e-20 103.6 459 31.2
COL.COLO4_27818 Corchorus olitorius HOM05D005042 ORTHO05D006080 2.9e-19 100.9 612 27.8
Mapoly0211s0012 Marchantia polymorpha HOM05D005042 ORTHO05D006080 3.8e-19 100.5 191 40.3
Ah.03g138660 Amaranthus hybridus HOM05D000485 ORTHO05D000341 1.1e-18 99.0 477 28.3
Dinv15585 Davidia involucrata HOM05D005042 ORTHO05D006080 2.1e-17 94.7 70 70.0
A07p35450 Brassica napus HOM05D005042 ORTHO05D006080 1.4e-16 92.0 175 41.1
BolC6t39355H Brassica oleracea HOM05D005042 ORTHO05D006080 1.4e-16 92.0 378 30.2
BraA07t31136Z Brassica rapa HOM05D005042 ORTHO05D006080 1.4e-16 92.0 175 41.1
C06p40780 Brassica napus HOM05D005042 ORTHO05D006080 1.2e-15 89.0 401 29.2
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 4.4e-15 87.0 555 27.2
AL2G28110 Arabidopsis lyrata HOM05D005042 ORTHO05D006080 1.3e-14 85.5 346 29.5
Thhalv10018302m.g Eutrema salsugineum HOM05D005042 ORTHO05D006080 8.3e-14 82.8 438 27.6
CBR_g19648 Chara braunii HOM05D005042 ORTHO05D006080 1.1e-13 82.4 103 45.6
Nn3g17525 Nelumbo nucifera HOM05D005042 ORTHO05D006080 2.4e-13 81.3 144 41.0
Carub.0002s1568 Capsella rubella HOM05D005042 ORTHO05D006080 7.0e-13 79.7 529 26.8
Os03g0752700 Oryza sativa ssp. japonica HOM05D005042 ORTHO05D006080 8.6e-11 72.8 438 29.2
Sed0017498 Sechium edule HOM05D005042 ORTHO05D006080 3.6e-09 67.4 126 38.1
Manes.14G088800 Manihot esculenta HOM05D005042 ORTHO05D006080 7.5e-07 59.7 405 27.7


User provided reference genes

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