Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055042.1 Olea europaea HOM05D003193 ORTHO05D004924 0.0e+00 1910.2 1012 100.0
COL.COLO4_37867 Corchorus olitorius HOM05D003193 ORTHO05D004924 0.0e+00 1728.4 1005 88.6
SalBow1G5750 Salvia bowleyana HOM05D003193 ORTHO05D004924 0.0e+00 1726.8 1005 90.2
Duzib177G0185 Durio zibethinus HOM05D003193 ORTHO05D004924 0.0e+00 1723.0 1005 90.0
Gorai.007G272000 Gossypium raimondii HOM05D003193 ORTHO05D004924 0.0e+00 1721.1 1005 89.6
Gohir.D11G253200 Gossypium hirsutum HOM05D003193 ORTHO05D004924 0.0e+00 1719.1 1005 89.5
GSVIVG01026340001 Vitis vinifera HOM05D003193 ORTHO05D004924 0.0e+00 1718.7 1005 90.4
Gohir.A11G243500 Gossypium hirsutum HOM05D003193 ORTHO05D004924 0.0e+00 1716.8 1005 89.6
QL03p032698 Quercus lobata HOM05D003193 ORTHO05D004924 0.0e+00 1712.2 1005 89.2
Manes.09G146200 Manihot esculenta HOM05D003193 ORTHO05D004924 0.0e+00 1708.3 1005 89.9
Cc09_g03080 Coffea canephora HOM05D003193 ORTHO05D004924 0.0e+00 1704.1 1030 86.3
Nitab4.5_0002063g0040 Nicotiana tabacum HOM05D003193 ORTHO05D004924 0.0e+00 1697.9 1025 86.5
Sopen04g021290 Solanum pennellii HOM05D003193 ORTHO05D004924 0.0e+00 1697.9 1005 87.1
MD12G1252000 Malus domestica HOM05D003193 ORTHO05D004924 0.0e+00 1695.6 1005 87.3
CAN.G131.15 Capsicum annuum HOM05D003193 ORTHO05D004924 0.0e+00 1694.9 1005 86.9
ClCG11G010250 Citrullus lanatus HOM05D003193 ORTHO05D004924 0.0e+00 1687.9 1005 86.6
Atru.chr2.1127 Acer truncatum HOM05D003193 ORTHO05D004924 0.0e+00 1686.4 1005 88.1
CSS0043374 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D004924 0.0e+00 1679.8 1005 88.4
Lsat_1_v5_gn_9_45981 Lactuca sativa HOM05D003193 ORTHO05D004924 0.0e+00 1675.2 1017 86.6
CsaV3_2G010070 Cucumis sativus L. HOM05D003193 ORTHO05D004924 0.0e+00 1674.8 1005 86.2
RcHm_v2.0_Chr3g0449041 Rosa chinensis HOM05D003193 ORTHO05D004924 0.0e+00 1674.8 1005 86.1
Thecc.05G265800 Theobroma cacao HOM05D003193 ORTHO05D004924 0.0e+00 1668.7 1005 87.7
Potri.019G024200 Populus trichocarpa HOM05D003193 ORTHO05D004924 0.0e+00 1666.7 1005 87.7
CSS0037513 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D004924 0.0e+00 1662.5 967 90.3
Sed0015322 Sechium edule HOM05D003193 ORTHO05D004924 0.0e+00 1659.8 1005 85.1
FAN14G4461 Fragaria x ananassa HOM05D003193 ORTHO05D004924 0.0e+00 1659.0 1005 85.4
Glyma.19G249900 Glycine max HOM05D003193 ORTHO05D004924 0.0e+00 1659.0 1005 87.1
Glyma.03G252300 Glycine max HOM05D003193 ORTHO05D004924 0.0e+00 1657.9 1005 86.9
TWI60G0900 Tripterygium wilfordii HOM05D003193 ORTHO05D004924 0.0e+00 1656.7 1005 86.3
Lj1g0024446 Lotus japonicus HOM05D003193 ORTHO05D004924 0.0e+00 1652.5 1005 85.3
Dinv06951 Davidia involucrata HOM05D003193 ORTHO05D004924 0.0e+00 1646.7 1005 86.2
Ciclev10018428m.g Citrus clementina HOM05D003193 ORTHO05D004924 0.0e+00 1643.6 1005 86.6
SGA_v2.0_scaffold62G21472 Striga asiatica HOM05D003193 ORTHO05D004924 0.0e+00 1643.6 1005 85.6
CANSAT54G2238 Cannabis sativa HOM05D003193 ORTHO05D004924 0.0e+00 1641.3 1005 84.4
Eucgr.H04206 Eucalyptus grandis HOM05D003193 ORTHO05D004924 0.0e+00 1640.9 1033 83.7
unitig_37.g12282 Utricularia gibba HOM05D003193 ORTHO05D004924 0.0e+00 1639.8 1006 86.5
PGR004G2196 Punica granatum HOM05D003193 ORTHO05D004924 0.0e+00 1638.6 1005 85.6
FvH4_6g01410 Fragaria vesca HOM05D003193 ORTHO05D004924 0.0e+00 1637.1 1005 84.6
FAN14G5315 Fragaria x ananassa HOM05D003193 ORTHO05D004924 0.0e+00 1636.7 1005 84.6
Cpa.g.sc51.21 Carica papaya HOM05D003193 ORTHO05D004924 0.0e+00 1633.6 966 88.8
arahy.Tifrunner.gnm1.ann1.ZPSV32 Arachis hypogaea HOM05D003193 ORTHO05D004924 0.0e+00 1621.3 1005 85.6
Prupe.6G353600 Prunus persica HOM05D003193 ORTHO05D004924 0.0e+00 1619.8 997 84.8
arahy.Tifrunner.gnm1.ann1.9XF1RW Arachis hypogaea HOM05D003193 ORTHO05D004924 0.0e+00 1617.1 1005 85.3
FAN02G3021 Fragaria x ananassa HOM05D003193 ORTHO05D004924 0.0e+00 1615.9 1005 83.7
Ca_09471_v3 Cicer arietinum L. HOM05D003193 ORTHO05D004924 0.0e+00 1615.5 1005 85.0
Nn1g03055 Nelumbo nucifera HOM05D003193 ORTHO05D004924 0.0e+00 1615.5 1005 85.5
FAN05G0534 Fragaria x ananassa HOM05D003193 ORTHO05D004924 0.0e+00 1607.0 967 86.2
FAN05G3617 Fragaria x ananassa HOM05D003193 ORTHO05D004924 0.0e+00 1607.0 967 86.2
Lalb_Chr04g0261971 Lupinus albus HOM05D003193 ORTHO05D004924 0.0e+00 1607.0 1005 84.7
Sabra19G0034100 Salix brachista HOM05D003193 ORTHO05D004924 0.0e+00 1605.1 1005 85.1
VMungo0540G1922 Vigna mungo HOM05D003193 ORTHO05D004924 0.0e+00 1602.8 1005 84.7
ECA232G1705 Erigeron canadensis HOM05D003193 ORTHO05D004924 0.0e+00 1602.0 1007 82.3
Rhsim05G0170000 Rhododendron simsii HOM05D003193 ORTHO05D004924 0.0e+00 1594.7 1100 79.3
Phvul.006G107000 Phaseolus vulgaris HOM05D003193 ORTHO05D004924 0.0e+00 1587.0 1005 84.0
vmacro19974 Vaccinium macrocarpon HOM05D003193 ORTHO05D004924 0.0e+00 1579.7 1115 76.8
Haze_04475 Corylus avellana HOM05D003193 ORTHO05D004924 0.0e+00 1578.1 1127 76.1
HanXRQChr05g0145131 Helianthus annuus HOM05D003193 ORTHO05D004924 0.0e+00 1576.2 1005 82.4
TPR.G4710 Trifolium pratense HOM05D003193 ORTHO05D004924 0.0e+00 1569.3 1005 83.1
DCAR_029994 Daucus carota HOM05D003193 ORTHO05D004924 0.0e+00 1565.1 1016 82.9
Medtr7g116425 Medicago truncatula HOM05D003193 ORTHO05D004924 0.0e+00 1562.4 1005 82.5
EL10Ac4g09775 Beta vulgaris HOM05D003193 ORTHO05D004924 0.0e+00 1560.0 1000 81.2
HPP92_001295 Vanilla planifolia HOM05D003193 ORTHO05D004924 0.0e+00 1555.0 1005 80.8
Psat0s4268g0040 Pisum sativum HOM05D003193 ORTHO05D004924 0.0e+00 1553.9 1005 82.2
Sc09g0001810 Simmondsia chinensis HOM05D003193 ORTHO05D004924 0.0e+00 1547.7 1005 80.8
Carub.0012s0016 Capsella rubella HOM05D003193 ORTHO05D004924 0.0e+00 1529.6 1004 80.7
THA.LOC104821587 Tarenaya hassleriana HOM05D003193 ORTHO05D004924 0.0e+00 1518.8 1005 80.6
ATR0787G173 Amborella trichopoda HOM05D003193 ORTHO05D004924 0.0e+00 1518.4 1005 80.4
Thhalv10022486m.g Eutrema salsugineum HOM05D003193 ORTHO05D004924 0.0e+00 1510.0 930 85.1
AL2G19160 Arabidopsis lyrata HOM05D003193 ORTHO05D004924 0.0e+00 1505.7 931 84.9
Migut.F02049 Erythranthe guttata HOM05D003193 ORTHO05D004924 0.0e+00 1504.2 931 85.3
Aa31LG2G2030 Aethionema arabicum HOM05D003193 ORTHO05D004924 0.0e+00 1503.8 934 84.8
Hma1.2p1_0123F.1_g058180 Hydrangea macrophylla HOM05D003193 ORTHO05D004924 0.0e+00 1502.6 890 89.7
AUR62006993 Chenopodium quinoa HOM05D003193 ORTHO05D004924 0.0e+00 1502.3 1005 80.2
AUR62000638 Chenopodium quinoa HOM05D003193 ORTHO05D004924 0.0e+00 1501.5 1005 80.1
BcaC03g16020 Brassica carinata HOM05D003193 ORTHO05D004924 0.0e+00 1498.8 931 84.9
A02p23930 Brassica napus HOM05D003193 ORTHO05D004924 0.0e+00 1498.8 931 84.9
C02p37720 Brassica napus HOM05D003193 ORTHO05D004924 0.0e+00 1498.8 931 84.9
BraA02t07385Z Brassica rapa HOM05D003193 ORTHO05D004924 0.0e+00 1498.8 931 84.9
MBI07_g08903_MAGBIO Magnolia biondii HOM05D003193 ORTHO05D004924 0.0e+00 1497.3 999 80.8
BolC2t09791H Brassica oleracea HOM05D003193 ORTHO05D004924 0.0e+00 1487.6 949 83.2
PSO832G2952 Papaver somniferum HOM05D003193 ORTHO05D004924 0.0e+00 1468.0 934 81.9
SpUn0003_0310 Schrenkiella parvula HOM05D003193 ORTHO05D004924 0.0e+00 1466.8 930 83.2
PSO764G0333 Papaver somniferum HOM05D003193 ORTHO05D004924 0.0e+00 1461.4 934 81.6
BcaB05g23590 Brassica carinata HOM05D003193 ORTHO05D004924 0.0e+00 1456.8 931 82.8
AT1G64790 Arabidopsis thaliana HOM05D003193 ORTHO05D004924 0.0e+00 1441.0 899 84.6
Aqoxy5G00090 Aquilegia oxysepala HOM05D003193 ORTHO05D004924 0.0e+00 1426.0 931 81.7
Mapoly0135s0025 Marchantia polymorpha HOM05D003193 ORTHO05D004924 0.0e+00 1396.3 1006 71.4
Zm00001eb055550 Zea mays HOM05D003193 ORTHO05D004924 0.0e+00 1362.1 932 78.8
CBR_g28040 Chara braunii HOM05D003193 ORTHO05D004924 0.0e+00 1360.1 1006 70.1
Hma1.2p1_0123F.1_g058190 Hydrangea macrophylla HOM05D003193 ORTHO05D004924 0.0e+00 1317.8 769 90.9
SHI15636 Sapria himalayana HOM05D003193 ORTHO05D004924 0.0e+00 1303.1 1010 69.1
Lj2C47T5 Lonicera japonica HOM05D003193 ORTHO05D004924 0.0e+00 1280.0 769 90.0
CiPaw.07G075200 Carya illinoinensis HOM05D003193 ORTHO05D004924 0.0e+00 1276.2 778 85.3
Pp3c22_8910 Physcomitrium patens HOM05D003193 ORTHO05D004924 0.0e+00 1244.2 936 68.8
TAR365G0326 Trochodendron aralioides HOM05D003193 ORTHO05D004924 0.0e+00 1223.8 1005 67.8
SMO356G0295 Selaginella moellendorffii HOM05D003193 ORTHO05D004924 0.0e+00 1196.0 968 64.8
Actinidia03822 Actinidia chinensis HOM05D003193 ORTHO05D004924 0.0e+00 1185.6 680 89.4
Solyc04g050510.3 Solanum lycopersicum HOM05D003193 ORTHO05D004924 0.0e+00 1129.0 663 88.4
CDE09G0882 Ceratophyllum demersum HOM05D003193 ORTHO05D004924 0.0e+00 1110.9 999 62.8
MD04G1233800 Malus domestica HOM05D003193 ORTHO05D004924 0.0e+00 1108.6 905 68.8
Peaxi162Scf00071g00269 Petunia axillaris HOM05D003193 ORTHO05D004924 0.0e+00 1082.0 674 85.5
MELO3C008660.2 Cucumis melo HOM05D003193 ORTHO05D004924 6.4e-292 1007.7 609 84.7
Hund07170 Selenicereus undatus HOM05D003193 ORTHO05D004924 4.3e-288 995.0 664 79.5
TAR636G2059 Trochodendron aralioides HOM05D003193 ORTHO05D004924 1.4e-278 963.4 607 86.3
AagrBONN_evm.TU.Sc2ySwM_344.2455 Anthoceros agrestis HOM05D003193 ORTHO05D004924 2.6e-277 959.1 1006 52.4
Cre01.g015600 Chlamydomonas reinhardtii HOM05D003193 ORTHO05D004924 3.0e-273 945.7 1017 50.0
Os03g0721200 Oryza sativa ssp. japonica HOM05D003193 ORTHO05D004924 5.5e-259 898.3 556 87.9
PRCOL_00002743 Prasinoderma coloniale HOM05D003193 ORTHO05D004924 2.6e-248 862.8 1012 46.7
MCO11G232 Micromonas commoda HOM05D003193 ORTHO05D004924 1.2e-224 784.3 765 54.0
SEGI_35396 Sequoiadendron giganteum HOM05D003193 ORTHO05D004924 4.1e-214 749.2 456 82.0
Lsat_1_v5_gn_7_43461 Lactuca sativa HOM05D003193 ORTHO05D004924 1.1e-187 661.4 442 77.8
FAN09G1546 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.9e-187 660.6 401 83.5
Ah.02g118790 Amaranthus hybridus HOM05D003193 ORTHO05D004924 8.4e-183 645.2 522 71.3
Psat2g117360 Pisum sativum HOM05D003193 ORTHO05D004924 5.1e-180 636.0 502 69.9
Peaxi162Scf00071g02610 Petunia axillaris HOM05D003193 ORTHO05D004924 2.4e-161 573.9 366 80.9
Solyc04g050520.3 Solanum lycopersicum HOM05D003193 ORTHO05D004924 2.0e-160 570.9 345 84.1
Hund28419 Selenicereus undatus HOM05D003193 ORTHO05D004924 2.6e-160 570.5 343 83.7
Hund28421 Selenicereus undatus HOM05D003193 ORTHO05D004924 2.6e-160 570.5 343 83.7
SalBow1G0653 Salvia bowleyana HOM05D003193 ORTHO05D004924 1.0e-156 558.5 510 63.1
Zm00001eb208180 Zea mays HOM05D003193 ORTHO05D004924 1.3e-156 558.1 345 83.8
Lsat_1_v5_gn_3_136501 Lactuca sativa HOM05D003193 ORTHO05D004924 1.9e-155 554.3 389 72.2
Lsat_1_v5_gn_8_84401 Lactuca sativa HOM05D003193 ORTHO05D004924 4.1e-153 546.6 427 67.4
Lsat_1_v5_gn_2_9720 Lactuca sativa HOM05D003193 ORTHO05D004924 5.7e-123 446.4 362 69.1
Nitab4.5_0001498g0050 Nicotiana tabacum HOM05D003193 ORTHO05D004924 1.7e-106 391.7 236 84.3
Actinidia26097 Actinidia chinensis HOM05D003193 ORTHO05D004924 6.1e-101 373.2 229 86.0
Actinidia06816 Actinidia chinensis HOM05D003193 ORTHO05D004924 4.0e-100 370.5 319 66.1
Actinidia03821 Actinidia chinensis HOM05D003193 ORTHO05D004924 1.2e-93 349.0 286 74.5
Lj2A47G46 Lonicera japonica HOM05D003193 ORTHO05D004924 1.7e-90 338.6 198 86.4
CARHR056140 Cardamine hirsuta HOM05D003193 ORTHO05D004924 6.4e-90 336.7 215 91.6
CDE09G0101 Ceratophyllum demersum HOM05D003193 ORTHO05D004924 1.7e-71 275.4 371 48.8
Nitab4.5_0019712g0010 Nicotiana tabacum HOM05D003193 ORTHO05D004924 1.1e-68 266.2 141 93.6
Actinidia06820 Actinidia chinensis HOM05D003193 ORTHO05D004924 3.9e-63 247.7 214 65.9
Psat7g226920 Pisum sativum HOM05D003193 ORTHO05D006495 2.5e-62 245.0 204 62.7
Psat2g117480 Pisum sativum HOM05D003193 ORTHO05D029199 2.3e-55 221.9 144 85.4
MCO13G622 Micromonas commoda HOM05D000681 ORTHO05D025872 8.1e-53 213.4 371 32.6
CiPaw.07G075300 Carya illinoinensis HOM05D003193 ORTHO05D004924 6.9e-52 210.3 122 80.3
Lsat_1_v5_gn_8_52980 Lactuca sativa HOM05D003193 ORTHO05D004924 1.9e-49 202.2 195 59.5
CARHR056150 Cardamine hirsuta HOM05D003193 ORTHO05D004924 1.4e-44 186.0 110 80.0
SEGI_11076 Sequoiadendron giganteum HOM05D003193 ORTHO05D004924 1.0e-42 179.9 122 65.6
RcHm_v2.0_Chr4g0403131 Rosa chinensis HOM05D003776 ORTHO05D004459 9.3e-41 173.3 138 61.6
RcHm_v2.0_Chr4g0403161 Rosa chinensis HOM05D003776 ORTHO05D004459 9.3e-41 173.3 138 61.6
Actinidia06817 Actinidia chinensis HOM05D003193 ORTHO05D004924 6.7e-39 167.2 120 75.8
Cre04.g222700 Chlamydomonas reinhardtii HOM05D000681 ORTHO05D028791 5.3e-36 157.5 376 28.7
Cre14.g615950 Chlamydomonas reinhardtii HOM05D000681 ORTHO05D028791 3.2e-33 148.3 296 33.1
PRCOL_00000464 Prasinoderma coloniale HOM05D000681 ORTHO05D025872 2.7e-32 145.2 362 30.1
Hund17244 Selenicereus undatus HOM05D003193 ORTHO05D006083 6.1e-32 144.1 109 69.7
MD04G1233900 Malus domestica HOM05D003193 ORTHO05D004924 6.9e-28 130.6 75 81.3
Zm00001eb208190 Zea mays HOM05D003193 ORTHO05D004924 3.2e-25 121.7 71 90.1
Actinidia26098 Actinidia chinensis HOM05D003193 ORTHO05D026302 7.2e-25 120.6 78 82.1
AL2G19220 Arabidopsis lyrata HOM05D003193 ORTHO05D004924 2.7e-24 118.6 116 57.8
DCAR_025592 Daucus carota HOM05D003193 ORTHO05D029199 2.2e-21 109.0 54 96.3
PRCOL_00007280 Prasinoderma coloniale HOM05D000681 ORTHO05D028791 2.8e-21 108.6 309 25.2
Lsat_1_v5_gn_8_118300 Lactuca sativa HOM05D003193 ORTHO05D002149 1.4e-20 106.3 220 33.2
Psat2g117520 Pisum sativum HOM05D003193 ORTHO05D023087 3.1e-20 105.1 70 67.1
Nitab4.5_0019712g0020 Nicotiana tabacum HOM05D003193 ORTHO05D004924 5.3e-20 104.4 79 74.7
Actinidia06821 Actinidia chinensis HOM05D003193 ORTHO05D026302 3.5e-19 101.7 64 85.9
Lsat_1_v5_gn_5_158860 Lactuca sativa HOM05D003193 ORTHO05D231496 6.5e-18 97.4 82 62.2
TWI60G1601 Tripterygium wilfordii HOM05D003193 ORTHO05D029199 2.6e-14 85.5 81 61.7
DCAR_015795 Daucus carota HOM05D003193 ORTHO05D029199 7.5e-14 84.0 43 93.0
Nitab4.5_0000841g0120 Nicotiana tabacum HOM05D003193 ORTHO05D004924 1.1e-12 80.1 44 88.6
SEGI_23671 Sequoiadendron giganteum HOM05D003193 ORTHO05D004924 4.5e-11 74.7 44 79.5
PSO104G0170 Papaver somniferum HOM05D003193 ORTHO05D000001 1.0e-07 63.5 61 55.7
QL03p032673 Quercus lobata HOM05D003193 ORTHO05D337941 1.5e-06 59.7 32 87.5
Actinidia23236 Actinidia chinensis HOM05D003193 ORTHO05D055714 2.6e-06 58.9 66 56.1
RcHm_v2.0_Chr6g0282721 Rosa chinensis HOM05D003193 ORTHO05D023087 4.4e-06 58.2 42 64.3


User provided reference genes

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