Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055032.1 Olea europaea HOM05D005144 ORTHO05D006112 3.4e-83 311.6 156 100.0
MSTRG.11913 Avicennia marina HOM05D005144 ORTHO05D006112 3.1e-36 155.6 149 61.7
Migut.A00621 Erythranthe guttata HOM05D005144 ORTHO05D006112 2.2e-34 149.4 148 59.5
Oeu038551.1 Olea europaea HOM05D005144 ORTHO05D006112 5.0e-34 148.3 75 93.3
MSTRG.13890 Avicennia marina HOM05D005144 ORTHO05D006112 9.4e-33 144.1 149 57.7
MSTRG.1800 Avicennia marina HOM05D005144 ORTHO05D006112 2.0e-30 136.3 148 57.4
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 4.5e-27 125.2 144 52.1
EL10Ac5g12937 Beta vulgaris HOM05D005144 ORTHO05D006112 5.9e-27 124.8 155 52.3
Prupe.5G122700 Prunus persica HOM05D005144 ORTHO05D006112 2.2e-26 122.9 149 49.7
Actinidia04180 Actinidia chinensis HOM05D005144 ORTHO05D006112 5.0e-26 121.7 144 50.0
Manes.01G052400 Manihot esculenta HOM05D005144 ORTHO05D006112 5.0e-26 121.7 155 47.7
CSS0010562 Camellia sinensis var. sinensis HOM05D005144 ORTHO05D006112 1.1e-25 120.6 156 51.9
CSS0049427 Camellia sinensis var. sinensis HOM05D005144 ORTHO05D006112 1.1e-25 120.6 156 51.9
Dinv37515 Davidia involucrata HOM05D005144 ORTHO05D006112 1.1e-25 120.6 162 50.6
unitig_37.g12128 Utricularia gibba HOM05D000074 ORTHO05D007406 1.4e-25 120.2 86 72.1
Hma1.2p1_0440F.1_g153460 Hydrangea macrophylla HOM05D005144 ORTHO05D006112 1.9e-25 119.8 83 77.1
SalBow1G0822 Salvia bowleyana HOM05D005144 ORTHO05D006112 3.2e-25 119.0 139 55.4
Ah.12g052690 Amaranthus hybridus HOM05D005144 ORTHO05D006112 5.5e-25 118.2 162 50.0
Glyma.05G217900 Glycine max HOM05D005144 ORTHO05D006112 5.5e-25 118.2 147 51.0
Migut.E01282 Erythranthe guttata HOM05D005144 ORTHO05D006112 7.2e-25 117.9 91 69.2
MD14G1130800 Malus domestica HOM05D005144 ORTHO05D006112 7.2e-25 117.9 144 52.8
Sabra01G0065900 Salix brachista HOM05D005144 ORTHO05D006112 9.4e-25 117.5 150 51.3
Hund14208 Selenicereus undatus HOM05D005144 ORTHO05D006112 9.4e-25 117.5 151 49.7
Nitab4.5_0008496g0030 Nicotiana tabacum HOM05D005144 ORTHO05D006112 1.2e-24 117.1 143 53.8
Glyma.08G024000 Glycine max HOM05D005144 ORTHO05D006112 1.6e-24 116.7 147 50.3
TAR375G0238 Trochodendron aralioides HOM05D005144 ORTHO05D006112 1.6e-24 116.7 147 50.3
MELO3C016277.2 Cucumis melo HOM05D005144 ORTHO05D006112 2.1e-24 116.3 163 49.7
FAN13G1564 Fragaria x ananassa HOM05D005144 ORTHO05D006112 2.1e-24 116.3 143 50.3
FAN18G1164 Fragaria x ananassa HOM05D005144 ORTHO05D006112 2.1e-24 116.3 143 50.3
HanXRQChr17g0534951 Helianthus annuus HOM05D005144 ORTHO05D006112 2.1e-24 116.3 136 51.5
SalBow8G5178 Salvia bowleyana HOM05D005144 ORTHO05D006112 2.1e-24 116.3 144 47.9
FAN04G3040 Fragaria x ananassa HOM05D005144 ORTHO05D006112 2.7e-24 115.9 143 50.3
CsaV3_4G006720 Cucumis sativus L. HOM05D005144 ORTHO05D006112 3.6e-24 115.5 163 49.1
Potri.001G089600 Populus trichocarpa HOM05D005144 ORTHO05D006112 3.6e-24 115.5 150 51.3
RcHm_v2.0_Chr7g0194161 Rosa chinensis HOM05D005144 ORTHO05D006112 3.6e-24 115.5 154 50.0
Carub.0006s2967 Capsella rubella HOM05D005144 ORTHO05D006112 4.7e-24 115.2 83 74.7
CAN.G567.13 Capsicum annuum HOM05D005144 ORTHO05D006112 4.7e-24 115.2 147 52.4
PGR042G3213 Punica granatum HOM05D005144 ORTHO05D006112 1.0e-23 114.0 157 51.6
arahy.Tifrunner.gnm1.ann1.11VL1S Arachis hypogaea HOM05D005144 ORTHO05D006112 1.8e-23 113.2 153 47.7
arahy.Tifrunner.gnm1.ann1.72DNA3 Arachis hypogaea HOM05D005144 ORTHO05D006112 1.8e-23 113.2 153 47.7
MD06G1109700 Malus domestica HOM05D005144 ORTHO05D006112 1.8e-23 113.2 144 49.3
VMungo0251G3542 Vigna mungo HOM05D005144 ORTHO05D006112 1.8e-23 113.2 149 49.7
Sc07g0010100 Simmondsia chinensis HOM05D005144 ORTHO05D006112 2.3e-23 112.8 139 51.1
Manes.02G008400 Manihot esculenta HOM05D005144 ORTHO05D006112 3.0e-23 112.5 154 47.4
Sed0013108 Sechium edule HOM05D005144 ORTHO05D006112 3.9e-23 112.1 139 50.4
Potri.003G141600 Populus trichocarpa HOM05D005144 ORTHO05D006112 5.1e-23 111.7 87 66.7
Solyc08g082560.3 Solanum lycopersicum HOM05D005144 ORTHO05D006112 5.1e-23 111.7 148 49.3
Sopen08g030810 Solanum pennellii HOM05D005144 ORTHO05D006112 5.1e-23 111.7 148 49.3
TAR374G1437 Trochodendron aralioides HOM05D005144 ORTHO05D006112 5.1e-23 111.7 143 50.3
CANSAT21G0803 Cannabis sativa HOM05D005144 ORTHO05D006112 8.8e-23 110.9 79 75.9
Lj4g0014592 Lotus japonicus HOM05D005144 ORTHO05D006112 8.8e-23 110.9 145 50.3
CiPaw.11G119100 Carya illinoinensis HOM05D005144 ORTHO05D006112 1.1e-22 110.5 162 49.4
Duzib205G1188 Durio zibethinus HOM05D005144 ORTHO05D006112 1.1e-22 110.5 62 82.3
CiPaw.12G081400 Carya illinoinensis HOM05D005144 ORTHO05D006112 1.5e-22 110.2 156 46.8
Sabra03G0102000 Salix brachista HOM05D005144 ORTHO05D006112 1.5e-22 110.2 87 65.5
GSVIVG01019559001 Vitis vinifera HOM05D005144 ORTHO05D006112 1.5e-22 110.2 70 80.0
Lalb_Chr09g0332261 Lupinus albus HOM05D005144 ORTHO05D006112 2.0e-22 109.8 154 48.7
Phvul.002G299800 Phaseolus vulgaris HOM05D005144 ORTHO05D006112 2.0e-22 109.8 149 49.0
Gorai.008G256000 Gossypium raimondii HOM05D005144 ORTHO05D006112 2.6e-22 109.4 155 45.8
Nitab4.5_0000798g0100 Nicotiana tabacum HOM05D005144 ORTHO05D006112 2.6e-22 109.4 143 51.7
CARHR255680 Cardamine hirsuta HOM05D005144 ORTHO05D006112 3.3e-22 109.0 81 71.6
ClCG07G011500 Citrullus lanatus HOM05D005144 ORTHO05D006112 3.3e-22 109.0 163 46.6
Gohir.A12G237800 Gossypium hirsutum HOM05D005144 ORTHO05D006112 3.3e-22 109.0 156 46.8
Cfa011983 Carpinus fangiana HOM05D005144 ORTHO05D006112 4.4e-22 108.6 55 94.5
Haze_09089 Corylus avellana HOM05D005144 ORTHO05D006112 4.4e-22 108.6 55 94.5
Gohir.D09G184500 Gossypium hirsutum HOM05D005144 ORTHO05D006112 4.4e-22 108.6 162 45.1
Medtr8g099610 Medicago truncatula HOM05D005144 ORTHO05D006112 4.4e-22 108.6 142 50.0
BcaC04g21088 Brassica carinata HOM05D005144 ORTHO05D006112 5.7e-22 108.2 74 74.3
C09p35830 Brassica napus HOM05D005144 ORTHO05D006112 5.7e-22 108.2 74 74.3
BolC9t56417H Brassica oleracea HOM05D005144 ORTHO05D006112 5.7e-22 108.2 74 74.3
AUR62019860 Chenopodium quinoa HOM05D002356 ORTHO05D006112 5.7e-22 108.2 67 80.6
AT4G10925 Arabidopsis thaliana HOM05D005144 ORTHO05D006112 7.4e-22 107.8 80 73.8
Ca_17470_v3 Cicer arietinum L. HOM05D005144 ORTHO05D006112 7.4e-22 107.8 140 46.4
Cc08_g16260 Coffea canephora HOM05D005144 ORTHO05D006112 7.4e-22 107.8 55 90.9
FvH4_5g04920 Fragaria vesca HOM05D005144 ORTHO05D006112 7.4e-22 107.8 91 64.8
FAN18G2696 Fragaria x ananassa HOM05D005144 ORTHO05D006112 7.4e-22 107.8 91 64.8
Gohir.D12G238900 Gossypium hirsutum HOM05D005144 ORTHO05D006112 7.4e-22 107.8 155 45.8
Peaxi162Scf00074g00636 Petunia axillaris HOM05D005144 ORTHO05D006112 7.4e-22 107.8 95 61.1
Psat7g024160 Pisum sativum HOM05D005144 ORTHO05D006112 7.4e-22 107.8 145 48.3
THA.LOC104815124 Tarenaya hassleriana HOM05D005144 ORTHO05D006112 7.4e-22 107.8 83 67.5
TWI60G1459 Tripterygium wilfordii HOM05D005144 ORTHO05D006112 7.4e-22 107.8 58 87.9
vmacro11343 Vaccinium macrocarpon HOM05D005144 ORTHO05D006112 7.4e-22 107.8 72 76.4
HPP92_003882 Vanilla planifolia HOM05D005144 ORTHO05D006112 7.4e-22 107.8 97 59.8
ECA246G4745 Erigeron canadensis HOM05D005144 ORTHO05D006112 9.7e-22 107.5 79 68.4
Gohir.A02G099500 Gossypium hirsutum HOM05D005144 ORTHO05D006112 9.7e-22 107.5 78 70.5
Gohir.D03G084200 Gossypium hirsutum HOM05D005144 ORTHO05D006112 9.7e-22 107.5 62 80.6
Thecc.03G300600 Theobroma cacao HOM05D005144 ORTHO05D006112 9.7e-22 107.5 163 42.9
AUR62010862 Chenopodium quinoa HOM05D005144 ORTHO05D006112 1.3e-21 107.1 55 92.7
Eucgr.E00882 Eucalyptus grandis HOM05D005144 ORTHO05D006112 1.3e-21 107.1 75 73.3
Gohir.A09G189800 Gossypium hirsutum HOM05D005144 ORTHO05D006112 1.3e-21 107.1 165 43.6
Gorai.006G207000 Gossypium raimondii HOM05D005144 ORTHO05D006112 1.3e-21 107.1 162 44.4
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.3e-21 107.1 53 94.3
SGA_v2.0_scaffold96G29029 Striga asiatica HOM05D005144 ORTHO05D006112 1.3e-21 107.1 149 45.6
Gorai.003G078400 Gossypium raimondii HOM05D005144 ORTHO05D006112 1.7e-21 106.7 78 70.5
QL02p030059 Quercus lobata HOM05D005144 ORTHO05D006112 1.7e-21 106.7 163 44.2
Rhsim07G0081500 Rhododendron simsii HOM05D005144 ORTHO05D006112 2.2e-21 106.3 113 54.9
SGA_v2.0_scaffold305G47994 Striga asiatica HOM05D005144 ORTHO05D006112 2.2e-21 106.3 153 45.1
Ciclev10021394m.g Citrus clementina HOM05D005144 ORTHO05D006112 2.8e-21 105.9 86 65.1
SGA_v2.0_scaffold111G31399 Striga asiatica HOM05D005144 ORTHO05D006112 2.8e-21 105.9 65 81.5
COL.COLO4_10724 Corchorus olitorius HOM05D005144 ORTHO05D006112 3.7e-21 105.5 159 42.8
Thhalv10028928m.g Eutrema salsugineum HOM05D005144 ORTHO05D006112 3.7e-21 105.5 69 78.3
Sp6g06570 Schrenkiella parvula HOM05D005144 ORTHO05D006112 3.7e-21 105.5 73 75.3
AL6G45020 Arabidopsis lyrata HOM05D005144 ORTHO05D006112 4.8e-21 105.1 51 98.0
vmacro13890 Vaccinium macrocarpon HOM05D005144 ORTHO05D006112 4.8e-21 105.1 71 74.6
ATR0602G269 Amborella trichopoda HOM05D005144 ORTHO05D006112 6.3e-21 104.8 67 77.6
BcaB01g01559 Brassica carinata HOM05D005144 ORTHO05D006112 6.3e-21 104.8 74 74.3
CDE10G0687 Ceratophyllum demersum HOM05D005144 ORTHO05D006112 6.3e-21 104.8 133 48.9
Duzib084G0361 Durio zibethinus HOM05D005144 ORTHO05D006112 6.3e-21 104.8 156 44.2
Lsat_1_v5_gn_3_11240 Lactuca sativa HOM05D005144 ORTHO05D006112 6.3e-21 104.8 141 48.2
TWI15G0686 Tripterygium wilfordii HOM05D005144 ORTHO05D006112 6.3e-21 104.8 161 47.8
Hma1.2p1_0359F.1_g135130 Hydrangea macrophylla HOM05D005144 ORTHO05D006112 8.2e-21 104.4 58 86.2
A09p28270 Brassica napus HOM05D005144 ORTHO05D006112 1.1e-20 104.0 78 69.2
DCAR_006524 Daucus carota HOM05D005144 ORTHO05D006112 1.1e-20 104.0 70 75.7
BraA09t38396Z Brassica rapa HOM05D005144 ORTHO05D006112 1.8e-20 103.2 78 69.2
Lalb_Chr05g0224021 Lupinus albus HOM05D005144 ORTHO05D006112 1.8e-20 103.2 88 64.8
Duzib068G1441 Durio zibethinus HOM05D005144 ORTHO05D006112 3.1e-20 102.4 157 43.3
GSVIVG01000309001 Vitis vinifera HOM05D005144 ORTHO05D006112 3.1e-20 102.4 72 73.6
PSO384G2099 Papaver somniferum HOM05D005144 ORTHO05D006112 5.3e-20 101.7 68 76.5
TPR.G3399 Trifolium pratense HOM05D005144 ORTHO05D006112 5.3e-20 101.7 159 43.4
Lsat_1_v5_gn_6_8420 Lactuca sativa HOM05D005144 ORTHO05D006112 7.0e-20 101.3 153 49.0
Aqoxy5G04282 Aquilegia oxysepala HOM05D005144 ORTHO05D006112 9.1e-20 100.9 56 83.9
Aa31LG9G11190 Aethionema arabicum HOM05D005144 ORTHO05D006112 1.5e-19 100.1 142 48.6
Cpa.g.sc634.1 Carica papaya HOM05D005144 ORTHO05D006112 2.0e-19 99.8 168 43.5
Atru.chr9.1926 Acer truncatum HOM05D005144 ORTHO05D006112 4.5e-19 98.6 160 43.8
MBI07_g40676_MAGBIO Magnolia biondii HOM05D005144 ORTHO05D006112 5.9e-19 98.2 147 47.6
CDE10G0592 Ceratophyllum demersum HOM05D005144 ORTHO05D006112 7.7e-19 97.8 133 49.6
PSO135G1020 Papaver somniferum HOM05D005144 ORTHO05D006112 1.7e-18 96.7 141 44.0
THA.LOC104813044 Tarenaya hassleriana HOM05D005144 ORTHO05D006112 2.2e-18 96.3 48 93.8
Os01g0550200 Oryza sativa ssp. japonica HOM05D005144 ORTHO05D006112 5.0e-18 95.1 49 91.8
Zm00001eb356530 Zea mays HOM05D005144 ORTHO05D006112 5.0e-18 95.1 49 91.8
Zm00001eb162420 Zea mays HOM05D005144 ORTHO05D006112 6.5e-18 94.7 132 47.7
CBR_g48131 Chara braunii HOM05D005144 ORTHO05D006112 3.2e-17 92.4 70 67.1
Mapoly0024s0042 Marchantia polymorpha HOM05D005144 ORTHO05D006112 2.1e-16 89.7 61 68.9
SEGI_08848 Sequoiadendron giganteum HOM05D005144 ORTHO05D006112 5.2e-15 85.1 49 79.6
SMO356G0181 Selaginella moellendorffii HOM05D005144 ORTHO05D006112 1.5e-14 83.6 56 69.6
VMungo0540G0458 Vigna mungo HOM05D005144 ORTHO05D006112 2.6e-14 82.8 47 85.1
CARHR125070 Cardamine hirsuta HOM05D005144 ORTHO05D006112 1.3e-13 80.5 51 72.5
AagrBONN_evm.TU.Sc2ySwM_362.2655 Anthoceros agrestis HOM05D005144 ORTHO05D006112 1.8e-12 76.6 52 69.2
Carub.0007s1712 Capsella rubella HOM05D005144 ORTHO05D006112 4.5e-11 72.0 49 67.3
AT4G23960 Arabidopsis thaliana HOM05D005144 ORTHO05D006112 1.0e-10 70.9 46 69.6


User provided reference genes

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