Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054976.1 Olea europaea HOM05D006037 ORTHO05D007384 1.1e-59 233.0 115 100.0
Cc11_g09830 Coffea canephora HOM05D006037 ORTHO05D007384 1.0e-31 140.2 76 77.6
CSS0026176 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 1.3e-31 139.8 99 66.7
GSVIVG01011862001 Vitis vinifera HOM05D006037 ORTHO05D007384 1.3e-31 139.8 76 82.9
CSS0045711 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 1.7e-31 139.4 76 78.9
SGA_v2.0_scaffold38G14964 Striga asiatica HOM05D006037 ORTHO05D000229 1.7e-31 139.4 76 80.3
Lsat_1_v5_gn_3_57741 Lactuca sativa HOM05D006037 ORTHO05D007384 2.2e-31 139.0 76 81.6
Hma1.2p1_1024F.1_g249220 Hydrangea macrophylla HOM05D006037 ORTHO05D007384 3.8e-31 138.3 75 80.0
Actinidia14911 Actinidia chinensis HOM05D006037 ORTHO05D007384 1.1e-30 136.7 76 80.3
MSTRG.7652 Avicennia marina HOM05D006037 ORTHO05D007384 1.1e-30 136.7 76 80.3
CAN.G610.57 Capsicum annuum HOM05D006037 ORTHO05D007384 1.1e-30 136.7 75 81.3
HanXRQChr17g0551931 Helianthus annuus HOM05D006037 ORTHO05D007384 5.5e-30 134.4 76 78.9
Nitab4.5_0001616g0090 Nicotiana tabacum HOM05D006037 ORTHO05D007384 7.1e-30 134.0 75 78.7
Nitab4.5_0005528g0030 Nicotiana tabacum HOM05D006037 ORTHO05D007384 7.1e-30 134.0 75 80.0
TAR622G1007 Trochodendron aralioides HOM05D006037 ORTHO05D007384 7.1e-30 134.0 76 75.0
FAN22G1751 Fragaria x ananassa HOM05D006037 ORTHO05D007384 9.3e-30 133.7 98 65.3
SalBow8G2496 Salvia bowleyana HOM05D006037 ORTHO05D007384 9.3e-30 133.7 76 78.9
SalBow8G4457 Salvia bowleyana HOM05D006037 ORTHO05D007384 9.3e-30 133.7 76 78.9
arahy.Tifrunner.gnm1.ann1.CBB0MY Arachis hypogaea HOM05D006037 ORTHO05D007384 1.2e-29 133.3 76 76.3
Solyc05g009140.3 Solanum lycopersicum HOM05D006037 ORTHO05D007384 1.2e-29 133.3 75 80.0
Sopen05g004860 Solanum pennellii HOM05D006037 ORTHO05D007384 1.2e-29 133.3 75 80.0
arahy.Tifrunner.gnm1.ann1.NA36PT Arachis hypogaea HOM05D006037 ORTHO05D007384 1.6e-29 132.9 76 76.3
Peaxi162Scf00753g00122 Petunia axillaris HOM05D006037 ORTHO05D007384 1.6e-29 132.9 75 78.7
MD16G1039700 Malus domestica HOM05D006037 ORTHO05D007384 2.1e-29 132.5 76 75.0
RcHm_v2.0_Chr5g0042931 Rosa chinensis HOM05D006037 ORTHO05D007384 2.1e-29 132.5 77 74.0
ECA246G3707 Erigeron canadensis HOM05D006037 ORTHO05D007384 2.7e-29 132.1 76 78.9
vmacro10580 Vaccinium macrocarpon HOM05D006037 ORTHO05D007384 2.7e-29 132.1 76 76.3
PSO478G0980 Papaver somniferum HOM05D006037 ORTHO05D007384 3.5e-29 131.7 76 72.4
Haze_00627 Corylus avellana HOM05D006037 ORTHO05D007384 4.6e-29 131.3 107 57.9
FvH4_4g26975 Fragaria vesca HOM05D006037 ORTHO05D007384 6.0e-29 131.0 76 75.0
RcHm_v2.0_Chr4g0434781 Rosa chinensis HOM05D006037 ORTHO05D007384 6.0e-29 131.0 91 65.9
FAN12G3404 Fragaria x ananassa HOM05D006037 ORTHO05D007384 7.9e-29 130.6 91 67.0
Cpa.g.sc65.52 Carica papaya HOM05D006037 ORTHO05D007384 1.0e-28 130.2 81 70.4
RcHm_v2.0_Chr7g0243441 Rosa chinensis HOM05D006037 ORTHO05D007384 1.0e-28 130.2 77 72.7
TPR.G4859 Trifolium pratense HOM05D006037 ORTHO05D007384 1.0e-28 130.2 76 75.0
RcHm_v2.0_Chr6g0261541 Rosa chinensis HOM05D006037 ORTHO05D007384 1.3e-28 129.8 77 72.7
Lalb_Chr06g0165941 Lupinus albus HOM05D006037 ORTHO05D007384 2.3e-28 129.0 76 72.4
Prupe.1G314400 Prunus persica HOM05D006037 ORTHO05D007384 2.3e-28 129.0 76 75.0
PSO017G5347 Papaver somniferum HOM05D006037 ORTHO05D007384 3.0e-28 128.6 76 71.1
QL01p040421 Quercus lobata HOM05D006037 ORTHO05D007384 3.0e-28 128.6 76 71.1
Glyma.20G118000 Glycine max HOM05D006037 ORTHO05D007384 3.9e-28 128.3 76 72.4
Psat6g225720 Pisum sativum HOM05D006037 ORTHO05D007384 3.9e-28 128.3 76 73.7
Aqoxy3G00235 Aquilegia oxysepala HOM05D006037 ORTHO05D007384 5.1e-28 127.9 76 73.7
Nn3g17908 Nelumbo nucifera HOM05D006037 ORTHO05D007384 5.1e-28 127.9 76 73.7
Atru.chr11.165 Acer truncatum HOM05D006037 ORTHO05D007384 8.7e-28 127.1 79 69.6
MD13G1039000 Malus domestica HOM05D006037 ORTHO05D007384 8.7e-28 127.1 97 59.8
Ca_11141_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 1.1e-27 126.7 77 74.0
Ca_11146_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 1.1e-27 126.7 77 74.0
VMungo0720G2449 Vigna mungo HOM05D006037 ORTHO05D007384 1.1e-27 126.7 79 69.6
Lj5g0002773 Lotus japonicus HOM05D006037 ORTHO05D007384 1.5e-27 126.3 76 72.4
Rhsim09G0105100 Rhododendron simsii HOM05D006037 ORTHO05D007384 1.5e-27 126.3 76 75.0
unitig_747.g21203 Utricularia gibba HOM05D006037 ORTHO05D007384 1.5e-27 126.3 76 72.4
THA.LOC104821921 Tarenaya hassleriana HOM05D006037 ORTHO05D007384 1.9e-27 125.9 76 69.7
CiPaw.05G240100 Carya illinoinensis HOM05D006037 ORTHO05D007384 2.5e-27 125.6 76 71.1
Medtr1g110300 Medicago truncatula HOM05D006037 ORTHO05D007384 2.5e-27 125.6 76 71.1
Manes.14G105200 Manihot esculenta HOM05D006037 ORTHO05D007384 4.3e-27 124.8 76 72.4
DCAR_007255 Daucus carota HOM05D006037 ORTHO05D007384 5.7e-27 124.4 110 58.2
Phvul.007G029700 Phaseolus vulgaris HOM05D006037 ORTHO05D007384 9.6e-27 123.6 88 67.0
QL02p008285 Quercus lobata HOM05D000178 ORTHO05D007384 1.3e-26 123.2 76 68.4
Sabra10G0092100 Salix brachista HOM05D006037 ORTHO05D007384 1.3e-26 123.2 76 71.1
Sabra10G0092200 Salix brachista HOM05D006037 ORTHO05D007384 1.3e-26 123.2 76 69.7
Eucgr.B02995 Eucalyptus grandis HOM05D006037 ORTHO05D007384 1.6e-26 122.9 76 71.1
MBI09_g07743_MAGBIO Magnolia biondii HOM05D006037 ORTHO05D007384 1.6e-26 122.9 76 68.4
Potri.010G122000 Populus trichocarpa HOM05D006037 ORTHO05D007384 1.6e-26 122.9 76 72.4
Potri.010G122100 Populus trichocarpa HOM05D006037 ORTHO05D007384 2.1e-26 122.5 76 69.7
CANSAT01G2894 Cannabis sativa HOM05D006037 ORTHO05D007384 2.8e-26 122.1 76 71.1
Ciclev10014910m.g Citrus clementina HOM05D006037 ORTHO05D007384 2.8e-26 122.1 76 69.7
Thecc.02G224800 Theobroma cacao HOM05D006037 ORTHO05D007384 2.8e-26 122.1 76 69.7
ATR1125G090 Amborella trichopoda HOM05D006037 ORTHO05D007384 3.7e-26 121.7 76 68.4
Sc11g0003550 Simmondsia chinensis HOM05D006037 ORTHO05D007384 3.7e-26 121.7 76 67.1
Gohir.D02G171000 Gossypium hirsutum HOM05D006037 ORTHO05D007384 4.8e-26 121.3 76 71.1
COL.COLO4_38215 Corchorus olitorius HOM05D006037 ORTHO05D007384 1.1e-25 120.2 76 68.4
Gorai.005G192200 Gossypium raimondii HOM05D006037 ORTHO05D007384 1.1e-25 120.2 76 71.1
PGR102G0142 Punica granatum HOM05D006037 ORTHO05D007384 1.1e-25 120.2 76 69.7
Gohir.A03G147800 Gossypium hirsutum HOM05D006037 ORTHO05D007384 1.4e-25 119.8 76 71.1
Os01g0133500 Oryza sativa ssp. japonica HOM05D006037 ORTHO05D007384 1.4e-25 119.8 76 65.8
EL10Ac6g14338 Beta vulgaris HOM05D006037 ORTHO05D007384 3.1e-25 118.6 76 68.4
AUR62037301 Chenopodium quinoa HOM05D006037 ORTHO05D007384 6.9e-25 117.5 76 69.7
AUR62037303 Chenopodium quinoa HOM05D006037 ORTHO05D007384 6.9e-25 117.5 77 68.8
Duzib248G1272 Durio zibethinus HOM05D006037 ORTHO05D007384 6.9e-25 117.5 76 67.1
AUR62002838 Chenopodium quinoa HOM05D006037 ORTHO05D007384 2.6e-24 115.5 76 67.1
BcaC05g26470 Brassica carinata HOM05D006037 ORTHO05D007384 3.4e-24 115.2 82 59.8
BcaC05g26471 Brassica carinata HOM05D006037 ORTHO05D007384 3.4e-24 115.2 76 64.5
BcaC05g26674 Brassica carinata HOM05D006037 ORTHO05D007384 3.4e-24 115.2 76 64.5
A09p39240 Brassica napus HOM05D006037 ORTHO05D007384 3.4e-24 115.2 76 64.5
C05p25140 Brassica napus HOM05D006037 ORTHO05D007384 3.4e-24 115.2 76 64.5
BolC5t31246H Brassica oleracea HOM05D006037 ORTHO05D007384 3.4e-24 115.2 76 64.5
BraA09t39423Z Brassica rapa HOM05D006037 ORTHO05D007384 3.4e-24 115.2 76 64.5
Ah.02g127690 Amaranthus hybridus HOM05D006037 ORTHO05D007384 4.5e-24 114.8 76 65.8
AUR62002836 Chenopodium quinoa HOM05D006037 ORTHO05D007384 4.5e-24 114.8 76 68.4
Zm00001eb125200 Zea mays HOM05D006037 ORTHO05D007384 4.5e-24 114.8 76 63.2
Carub.0001s2514 Capsella rubella HOM05D006037 ORTHO05D007384 5.9e-24 114.4 76 64.5
Thhalv10007371m.g Eutrema salsugineum HOM05D006037 ORTHO05D007384 5.9e-24 114.4 76 63.2
AL1G39950 Arabidopsis lyrata HOM05D006037 ORTHO05D007384 2.9e-23 112.1 76 63.2
Aa31LG7G9120 Aethionema arabicum HOM05D006037 ORTHO05D007384 8.4e-23 110.5 76 61.8
CDE12G0065 Ceratophyllum demersum HOM05D006037 ORTHO05D007384 2.5e-22 109.0 76 63.2
AT1G25375 Arabidopsis thaliana HOM05D006037 ORTHO05D007384 4.2e-22 108.2 76 60.5
Migut.L01043 Erythranthe guttata HOM05D006037 ORTHO05D007384 1.1e-19 100.1 67 73.1
Aa31LG7G9130 Aethionema arabicum HOM05D006037 ORTHO05D007384 1.9e-19 99.4 76 56.6
Mapoly0042s0034 Marchantia polymorpha HOM05D006037 ORTHO05D007384 1.6e-18 96.3 76 52.6
Lj3C1012T17 Lonicera japonica HOM05D006037 ORTHO05D007384 8.2e-18 94.0 58 72.4
TWI31G0909 Tripterygium wilfordii HOM05D006037 ORTHO05D007384 2.0e-16 89.4 58 67.2
AagrBONN_evm.TU.Sc2ySwM_117.146 Anthoceros agrestis HOM05D006037 ORTHO05D007384 2.2e-15 85.9 74 50.0
SMO164G0020 Selaginella moellendorffii HOM05D006037 ORTHO05D007384 1.9e-14 82.8 76 50.0
Lsat_1_v5_gn_7_98681 Lactuca sativa HOM05D006037 ORTHO05D007384 3.6e-13 78.6 90 46.7
SEGI_35277 Sequoiadendron giganteum HOM05D006037 ORTHO05D007384 1.5e-11 73.2 73 43.8
TAR622G1402 Trochodendron aralioides HOM05D006037 ORTHO05D007384 5.7e-11 71.2 38 73.7
ECA247G1102 Erigeron canadensis HOM05D003337 ORTHO05D003808 7.7e-08 60.8 54 61.1
CBR_g162 Chara braunii HOM05D006037 ORTHO05D007384 8.5e-07 57.4 78 38.5


User provided reference genes

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