Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 5.8e-308 1060.1 534 100.0
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 2.9e-267 924.9 534 87.8
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 1.6e-228 796.2 550 74.9
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 1.9e-226 789.3 543 74.0
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 1.1e-213 746.9 545 71.7
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 1.8e-213 746.1 460 80.2
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 3.1e-213 745.3 545 72.1
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 7.0e-213 744.2 424 85.1
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 5.0e-211 738.0 449 79.3
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 2.5e-210 735.7 547 70.4
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 6.1e-209 731.1 554 70.4
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 3.0e-208 728.8 510 73.7
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 6.8e-208 727.6 554 68.6
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 1.2e-207 726.9 534 70.0
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 5.7e-207 724.5 534 70.6
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 3.7e-206 721.8 536 71.8
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 4.9e-206 721.5 539 70.9
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 8.3e-206 720.7 432 80.6
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 3.1e-205 718.8 437 80.1
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 5.4e-205 718.0 540 69.3
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 4.5e-204 714.9 541 69.5
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 5.9e-204 714.5 537 68.9
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 7.8e-204 714.1 477 74.4
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 7.8e-204 714.1 529 69.6
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 8.6e-203 710.7 517 70.4
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 1.9e-202 709.5 452 76.5
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 3.3e-202 708.8 444 80.6
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 3.3e-202 708.8 537 69.5
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 9.5e-202 707.2 533 69.2
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 1.2e-201 706.8 543 70.7
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 1.6e-201 706.4 452 76.1
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 1.6e-201 706.4 441 77.1
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 2.1e-201 706.1 456 76.8
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 2.8e-201 705.7 544 66.4
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 4.7e-201 704.9 487 72.9
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 8.0e-201 704.1 541 68.0
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 1.4e-200 703.4 533 69.4
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 1.4e-200 703.4 533 68.5
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 2.3e-200 702.6 526 70.2
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 3.0e-200 702.2 533 68.5
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 4.0e-200 701.8 423 79.2
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 5.2e-200 701.4 430 79.1
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 8.9e-200 700.7 529 68.1
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 2.0e-199 699.5 487 70.2
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 2.6e-199 699.1 507 70.2
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 7.5e-199 697.6 555 67.4
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 2.9e-198 695.7 530 67.5
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 2.9e-198 695.7 529 67.9
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 3.7e-198 695.3 544 68.2
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 4.9e-198 694.9 518 67.6
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 8.3e-198 694.1 536 68.3
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 1.1e-197 693.7 542 67.5
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 2.4e-197 692.6 429 77.9
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 2.4e-197 692.6 512 69.9
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 3.2e-197 692.2 535 66.9
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 5.4e-197 691.4 597 63.7
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 7.0e-197 691.0 437 76.0
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 1.7e-195 686.4 464 72.8
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 2.3e-195 686.0 427 79.2
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 2.3e-195 686.0 483 70.0
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 2.3e-195 686.0 427 78.2
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 3.9e-195 685.3 524 67.0
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.9e-194 682.9 446 75.1
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 3.3e-194 682.2 438 76.9
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 2.1e-193 679.5 534 65.9
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 2.8e-193 679.1 422 78.7
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 2.8e-193 679.1 508 69.7
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 2.8e-193 679.1 457 73.7
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 2.8e-193 679.1 644 59.8
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 4.7e-193 678.3 511 69.1
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 4.7e-193 678.3 534 66.5
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 6.2e-193 677.9 507 69.2
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 8.0e-193 677.6 507 70.2
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 8.0e-193 677.6 504 70.0
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 8.0e-193 677.6 504 70.0
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 8.0e-193 677.6 534 66.5
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 1.4e-192 676.8 536 63.6
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 1.4e-192 676.8 455 73.6
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 1.8e-192 676.4 493 70.2
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 1.8e-192 676.4 493 70.2
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 2.3e-192 676.0 504 69.8
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 2.3e-192 676.0 510 68.6
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 2.3e-192 676.0 504 69.8
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 2.3e-192 676.0 510 68.6
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 5.2e-192 674.9 507 69.0
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 6.8e-192 674.5 505 67.7
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 8.9e-192 674.1 528 67.0
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 1.5e-191 673.3 532 68.0
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 3.4e-191 672.2 506 69.0
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 1.3e-190 670.2 527 67.0
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 1.3e-190 670.2 489 70.6
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 2.9e-190 669.1 537 65.9
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 1.1e-189 667.2 506 71.9
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 5.4e-189 664.8 524 66.2
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 1.2e-188 663.7 533 66.6
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.3e-187 660.2 418 75.8
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 1.5e-186 656.8 421 74.3
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.5e-186 656.0 511 67.9
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 3.3e-186 655.6 511 67.3
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.7e-185 651.7 511 67.5
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 8.1e-185 651.0 505 68.7
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.3e-182 643.7 511 67.7
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 3.7e-182 642.1 415 75.2
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 6.4e-182 641.3 525 67.6
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.1e-181 640.6 522 65.9
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 3.2e-181 639.0 423 76.6
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 1.3e-179 633.6 427 74.9
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 5.1e-179 631.7 524 63.5
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 2.5e-178 629.4 553 64.9
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 7.3e-178 627.9 593 58.2
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 2.1e-177 626.3 534 63.1
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 3.1e-176 622.5 469 71.6
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.2e-175 620.5 425 69.2
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 8.7e-171 604.4 573 60.6
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 8.7e-171 604.4 629 57.4
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 5.2e-168 595.1 604 55.8
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 5.2e-168 595.1 374 75.4
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 2.9e-166 589.3 436 63.8
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 1.0e-163 580.9 472 65.7
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.9e-162 576.6 425 70.4
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 2.8e-161 572.8 420 65.5
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 4.8e-161 572.0 487 61.4
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 6.2e-161 571.6 506 60.3
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 1.4e-160 570.5 355 78.0
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 3.4e-159 565.8 417 66.9
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 1.7e-158 563.5 531 58.4
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 2.2e-158 563.1 530 56.2
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 3.2e-157 559.3 422 63.5
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 9.6e-154 547.7 495 59.4
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 1.8e-152 543.5 368 71.7
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 1.3e-150 537.3 473 62.2
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 2.4e-149 533.1 504 60.7
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 7.9e-148 528.1 480 61.9
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 2.5e-146 523.1 314 82.2
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 2.8e-145 519.6 362 72.9
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 5.3e-144 515.4 321 77.6
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 5.8e-143 511.9 423 64.8
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 5.8e-143 511.9 451 63.4
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 6.5e-142 508.4 354 70.3
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 6.0e-140 501.9 357 72.3
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 1.0e-139 501.1 405 62.2
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 1.3e-134 484.2 429 61.8
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 4.2e-133 479.2 368 66.8
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 4.1e-128 462.6 490 55.7
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 1.2e-119 434.5 388 61.6
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 2.6e-119 433.3 351 61.8
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 5.9e-119 432.2 401 58.1
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 2.0e-111 407.1 288 71.5
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 2.0e-98 364.0 210 82.4
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 7.0e-96 355.5 434 45.6
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 8.0e-76 288.9 301 57.1
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 3.4e-74 283.5 310 53.9
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 2.2e-73 280.8 150 84.7
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 4.3e-69 266.5 208 69.2
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 4.3e-69 266.5 330 53.0
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 2.2e-65 254.2 193 60.6
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.3e-62 245.0 423 40.4
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 3.9e-62 243.4 155 77.4
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 1.2e-60 238.4 160 64.4
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 5.2e-59 233.0 406 35.0
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 8.4e-57 225.7 227 57.7
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 1.7e-49 201.4 485 32.0
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.7e-46 191.4 104 82.7
Cfa025900 Carpinus fangiana HOM05D004042 ORTHO05D123407 1.1e-19 102.4 175 36.6
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 6.9e-19 99.8 49 89.8
Cfa024924 Carpinus fangiana HOM05D004042 ORTHO05D004552 1.2e-18 99.0 213 32.9
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 2.9e-17 94.4 126 48.4
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 8.5e-17 92.8 51 82.4
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 2.1e-15 88.2 48 81.2
Sabra18G0058500 Salix brachista HOM05D004042 ORTHO05D004552 2.0e-10 71.6 106 41.5
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 8.5e-09 66.2 63 47.6
AUR62029035 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.4e-08 65.5 38 76.3
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 2.5e-08 64.7 51 58.8
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 6.1e-07 60.1 41 70.7


User provided reference genes

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