Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054739.1 Olea europaea HOM05D003733 ORTHO05D004035 1.0e-192 676.8 392 100.0
Oeu054741.2 Olea europaea HOM05D003733 ORTHO05D004035 4.7e-142 508.4 382 76.4
QL06p037705 Quercus lobata HOM05D003733 ORTHO05D004035 2.6e-79 300.1 372 48.1
Actinidia36390 Actinidia chinensis HOM05D003733 ORTHO05D004035 9.7e-79 298.1 375 50.9
Dinv26992 Davidia involucrata HOM05D003733 ORTHO05D004035 1.7e-78 297.4 372 51.6
GSVIVG01003708001 Vitis vinifera HOM05D003733 ORTHO05D004035 2.4e-77 293.5 409 48.9
Cfa006814 Carpinus fangiana HOM05D003733 ORTHO05D004035 7.7e-76 288.5 398 47.2
Nitab4.5_0000396g0250 Nicotiana tabacum HOM05D003733 ORTHO05D004035 1.9e-74 283.9 377 48.8
Lj4A174T33 Lonicera japonica HOM05D003733 ORTHO05D004035 5.5e-74 282.3 392 48.0
MSTRG.3501 Avicennia marina HOM05D003733 ORTHO05D004035 1.2e-71 274.6 403 47.9
Actinidia11935 Actinidia chinensis HOM05D003733 ORTHO05D004035 7.5e-71 271.9 375 50.9
SalBow7G4044 Salvia bowleyana HOM05D003733 ORTHO05D004035 1.7e-70 270.8 414 48.6
Migut.L00442 Erythranthe guttata HOM05D003733 ORTHO05D004035 2.2e-70 270.4 413 46.7
TAR381G0096 Trochodendron aralioides HOM05D003733 ORTHO05D004035 6.3e-70 268.9 376 47.9
PGSC0003DMG400030618 Solanum tuberosum HOM05D003733 ORTHO05D004035 1.6e-68 264.2 384 46.9
CAN.G1061.16 Capsicum annuum HOM05D003733 ORTHO05D004035 2.9e-67 260.0 378 47.1
TAR376G0930 Trochodendron aralioides HOM05D003733 ORTHO05D004035 5.5e-66 255.8 375 45.9
CiPaw.12G004300 Carya illinoinensis HOM05D003733 ORTHO05D004035 1.2e-65 254.6 380 45.8
Cc07_g07720 Coffea canephora HOM05D003733 ORTHO05D004035 1.6e-65 254.2 413 44.8
CSS0008611 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 2.3e-64 250.4 386 45.1
vmacro07413 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 1.2e-63 248.1 403 43.7
SalBow5G1957 Salvia bowleyana HOM05D003733 ORTHO05D004035 2.0e-63 247.3 426 45.5
TWI53G0148 Tripterygium wilfordii HOM05D003733 ORTHO05D004035 2.0e-63 247.3 392 46.9
Prupe.6G211200 Prunus persica HOM05D003733 ORTHO05D004035 3.7e-62 243.0 424 41.3
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 4.9e-62 242.7 376 45.5
TAR625G0952 Trochodendron aralioides HOM05D003733 ORTHO05D004035 6.3e-62 242.3 361 46.5
Sopen02g036340 Solanum pennellii HOM05D003733 ORTHO05D004035 2.0e-60 237.3 376 44.4
Nitab4.5_0000465g0130 Nicotiana tabacum HOM05D003733 ORTHO05D004035 3.5e-60 236.5 438 41.1
Haze_03945 Corylus avellana HOM05D003733 ORTHO05D004035 7.8e-60 235.3 394 42.1
Nitab4.5_0000093g0190 Nicotiana tabacum HOM05D003733 ORTHO05D004035 1.7e-59 234.2 377 43.8
Nitab4.5_0014307g0010 Nicotiana tabacum HOM05D003733 ORTHO05D004035 2.3e-59 233.8 433 40.4
Potri.007G009700 Populus trichocarpa HOM05D003733 ORTHO05D004035 2.3e-59 233.8 362 44.8
Sabra07G0007400 Salix brachista HOM05D003733 ORTHO05D008786 8.6e-59 231.9 392 42.1
Nn1g05776 Nelumbo nucifera HOM05D003733 ORTHO05D004035 1.5e-58 231.1 375 42.9
Thecc.01G082000 Theobroma cacao HOM05D003733 ORTHO05D004035 3.3e-58 229.9 409 46.5
vmacro20437 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 9.5e-58 228.4 399 42.6
Manes.12G120000 Manihot esculenta HOM05D003733 ORTHO05D004035 1.6e-57 227.6 349 44.7
Atru.chr3.1125_Atru.chr3.1126 Acer truncatum HOM05D003733 ORTHO05D004035 2.8e-57 226.9 373 44.2
Atru.chr3.1134_Atru.chr3.1135 Acer truncatum HOM05D003733 ORTHO05D004035 2.8e-57 226.9 373 44.2
CSS0020555 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 6.1e-57 225.7 316 48.1
ClCG01G018090 Citrullus lanatus HOM05D003733 ORTHO05D008786 1.8e-56 224.2 394 41.9
Glyma.08G272800 Glycine max HOM05D003733 ORTHO05D004035 2.6e-55 220.3 409 38.6
CSS0006986 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 3.4e-55 219.9 310 46.1
Aqoxy4G03244 Aquilegia oxysepala HOM05D003733 ORTHO05D004035 7.5e-55 218.8 377 41.6
RcHm_v2.0_Chr2g0109681 Rosa chinensis HOM05D003733 ORTHO05D004035 7.5e-55 218.8 407 39.8
DCAR_025843 Daucus carota HOM05D003733 ORTHO05D004035 3.7e-54 216.5 425 39.5
SGA_v2.0_scaffold13G06400 Striga asiatica HOM05D003733 ORTHO05D004035 1.1e-53 214.9 401 42.4
HanXRQChr17g0561681 Helianthus annuus HOM05D003733 ORTHO05D004035 5.4e-53 212.6 396 41.2
TPR.G1045 Trifolium pratense HOM05D003733 ORTHO05D008786 5.4e-53 212.6 375 42.4
Medtr5g030610 Medicago truncatula HOM05D003733 ORTHO05D004035 4.6e-52 209.5 375 41.1
Medtr5g430710 Medicago truncatula HOM05D003733 ORTHO05D008786 4.6e-52 209.5 375 41.1
Lalb_Chr16g0381411 Lupinus albus HOM05D003733 ORTHO05D004035 5.9e-52 209.1 404 38.6
Psat2g135720 Pisum sativum HOM05D003733 ORTHO05D004035 7.8e-52 208.8 370 41.9
Potri.005G148700 Populus trichocarpa HOM05D003733 ORTHO05D004035 1.7e-51 207.6 369 41.5
Glyma.01G097200 Glycine max HOM05D003733 ORTHO05D004035 2.1e-49 200.7 354 40.1
HanXRQChr12g0366081 Helianthus annuus HOM05D003733 ORTHO05D004035 1.4e-48 198.0 364 42.0
Peaxi162Scf00118g00109 Petunia axillaris HOM05D003733 ORTHO05D004035 5.2e-48 196.1 475 37.1
CsaV3_6G044630 Cucumis sativus L. HOM05D003733 ORTHO05D004035 8.9e-48 195.3 459 36.2
Lj4g0014652 Lotus japonicus HOM05D003733 ORTHO05D004035 2.0e-47 194.1 363 39.9
arahy.Tifrunner.gnm1.ann1.EGH0HL Arachis hypogaea HOM05D003733 ORTHO05D004035 1.3e-46 191.4 369 42.8
Ca_06073_v3 Cicer arietinum L. HOM05D003733 ORTHO05D004035 1.7e-46 191.0 359 40.4
Manes.13G105200 Manihot esculenta HOM05D003733 ORTHO05D004035 2.2e-46 190.7 348 40.2
Lj2g0016248 Lotus japonicus HOM05D003733 ORTHO05D004035 2.9e-46 190.3 393 39.2
MELO3C007686.2 Cucumis melo HOM05D003733 ORTHO05D004035 3.7e-46 189.9 445 35.7
Duzib264G0286 Durio zibethinus HOM05D003733 ORTHO05D004035 1.4e-45 188.0 395 39.0
PGR102G0988 Punica granatum HOM05D003733 ORTHO05D004035 1.4e-45 188.0 453 35.5
Solyc03g043760.4 Solanum lycopersicum HOM05D003733 ORTHO05D004035 1.9e-45 187.6 498 34.3
arahy.Tifrunner.gnm1.ann1.24SHUP Arachis hypogaea HOM05D003733 ORTHO05D004035 3.2e-45 186.8 369 41.7
CAN.G11.21 Capsicum annuum HOM05D003733 ORTHO05D004035 4.1e-45 186.4 482 35.1
Duzib147G1539 Durio zibethinus HOM05D003733 ORTHO05D004035 1.2e-44 184.9 390 41.8
CANSAT01G3253 Cannabis sativa HOM05D003733 ORTHO05D004035 1.6e-44 184.5 441 38.5
PSO210G1228 Papaver somniferum HOM05D003733 ORTHO05D004035 3.5e-44 183.3 398 36.7
Sopen03g007620 Solanum pennellii HOM05D003733 ORTHO05D004035 1.3e-43 181.4 498 33.7
Ciclev10025536m.g Citrus clementina HOM05D003733 ORTHO05D004035 1.7e-43 181.0 418 37.8
SGA_v2.0_scaffold174G39242 Striga asiatica HOM05D003733 ORTHO05D004035 2.3e-43 180.6 387 38.2
COL.COLO4_11664 Corchorus olitorius HOM05D000513 ORTHO05D008786 3.0e-43 180.3 432 38.4
MD16G1281700 Malus domestica HOM05D003733 ORTHO05D004035 1.5e-42 177.9 424 37.3
PSO832G4530 Papaver somniferum HOM05D003733 ORTHO05D004035 2.5e-42 177.2 390 33.8
Phvul.003G285300 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 5.6e-42 176.0 473 35.5
THA.LOC104804189 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 9.5e-42 175.3 471 36.5
Sed0014908 Sechium edule HOM05D003733 ORTHO05D004035 1.2e-41 174.9 481 34.5
MD01G1046400 Malus domestica HOM05D003733 ORTHO05D004035 1.6e-41 174.5 430 35.3
arahy.Tifrunner.gnm1.ann1.DCX0GA Arachis hypogaea HOM05D003733 ORTHO05D004035 3.1e-40 170.2 366 38.3
arahy.Tifrunner.gnm1.ann1.KS8TVJ Arachis hypogaea HOM05D003733 ORTHO05D004035 3.1e-40 170.2 366 38.3
FvH4_1g18820 Fragaria vesca HOM05D003733 ORTHO05D004035 5.2e-40 169.5 484 32.6
PSO761G0336 Papaver somniferum HOM05D003733 ORTHO05D004035 5.2e-40 169.5 399 35.1
unitig_0.g2606 Utricularia gibba HOM05D003733 ORTHO05D004035 6.8e-40 169.1 376 39.6
VMungo0251G1204 Vigna mungo HOM05D003733 ORTHO05D004035 6.8e-40 169.1 446 33.9
FAN19G3013 Fragaria x ananassa HOM05D003733 ORTHO05D004035 8.9e-40 168.7 485 32.2
Lj3g0005458 Lotus japonicus HOM05D003733 ORTHO05D004035 8.9e-40 168.7 351 39.6
VMungo1215G3108 Vigna mungo HOM05D003733 ORTHO05D004035 8.9e-40 168.7 388 38.9
FAN23G1272 Fragaria x ananassa HOM05D003733 ORTHO05D004035 1.5e-39 167.9 455 33.2
Phvul.002G139100 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 1.5e-39 167.9 402 37.6
CiPaw.12G004100 Carya illinoinensis HOM05D003733 ORTHO05D004035 2.0e-39 167.5 301 43.2
MD02G1269400 Malus domestica HOM05D003733 ORTHO05D004035 4.4e-39 166.4 398 37.4
Solyc02g091730.3 Solanum lycopersicum HOM05D003733 ORTHO05D004035 2.2e-38 164.1 293 41.6
Lsat_1_v5_gn_8_34760 Lactuca sativa HOM05D003733 ORTHO05D004035 6.4e-38 162.5 400 35.8
Gorai.003G035000 Gossypium raimondii HOM05D003733 ORTHO05D004035 1.4e-37 161.4 456 35.5
PSO782G1301 Papaver somniferum HOM05D003733 ORTHO05D004035 2.4e-37 160.6 402 35.3
Gohir.D03G033400 Gossypium hirsutum HOM05D003733 ORTHO05D004035 5.4e-37 159.5 457 35.2
Gohir.A02G147000 Gossypium hirsutum HOM05D003733 ORTHO05D004035 7.1e-37 159.1 444 35.8
Sed0009716 Sechium edule HOM05D003733 ORTHO05D004035 1.2e-36 158.3 374 37.2
Lalb_Chr09g0325721 Lupinus albus HOM05D003733 ORTHO05D004035 2.1e-36 157.5 387 35.4
Eucgr.D00182 Eucalyptus grandis HOM05D003733 ORTHO05D004035 2.7e-36 157.1 472 32.6
PGSC0003DMG400016686 Solanum tuberosum HOM05D003733 ORTHO05D004035 3.5e-36 156.8 327 39.1
VMungo1309G1560 Vigna mungo HOM05D003733 ORTHO05D004035 6.0e-36 156.0 430 33.7
ECA233G0477 Erigeron canadensis HOM05D003733 ORTHO05D004035 1.2e-33 148.3 462 31.4
unitig_88.g27718 Utricularia gibba HOM05D003733 ORTHO05D004035 1.1e-32 145.2 411 33.3
Aa31LG7G14100 Aethionema arabicum HOM05D003733 ORTHO05D004035 1.8e-32 144.4 524 28.6
Sc03g0000640 Simmondsia chinensis HOM05D003733 ORTHO05D004035 3.1e-32 143.7 425 33.4
ATR0584G133 Amborella trichopoda HOM05D003733 ORTHO05D004035 5.2e-32 142.9 400 34.0
MBI16_g41329_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 5.2e-32 142.9 369 35.5
THA.LOC104807653 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 9.9e-31 138.7 529 29.3
HPP92_024603 Vanilla planifolia HOM05D003733 ORTHO05D004035 2.2e-30 137.5 370 33.8
ATR0706G065 Amborella trichopoda HOM05D003733 ORTHO05D004035 1.9e-29 134.4 391 34.3
Hma1.2p1_0723F.1_g208790 Hydrangea macrophylla HOM05D003733 ORTHO05D004035 3.2e-29 133.7 219 46.6
EL10As13g24049 Beta vulgaris HOM05D003733 ORTHO05D004035 5.1e-27 126.3 383 31.6
CAN.G630.65 Capsicum annuum HOM05D003733 ORTHO05D004035 8.6e-27 125.6 354 33.9
AUR62027209 Chenopodium quinoa HOM05D003733 ORTHO05D004035 1.1e-26 125.2 397 32.0
BcaB06g27818 Brassica carinata HOM05D003733 ORTHO05D004035 1.5e-26 124.8 469 31.1
AUR62003259 Chenopodium quinoa HOM05D003733 ORTHO05D004035 1.9e-26 124.4 397 31.7
MBI16_g20893_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 5.6e-26 122.9 176 44.9
Oeu012608.1 Olea europaea HOM05D003733 ORTHO05D004035 1.2e-25 121.7 91 72.5
Sp4g01710 Schrenkiella parvula HOM05D003733 ORTHO05D004035 2.1e-25 120.9 444 31.3
AL4G12240 Arabidopsis lyrata HOM05D003733 ORTHO05D004035 3.6e-25 120.2 486 30.5
C08p40430 Brassica napus HOM05D003733 ORTHO05D004035 8.1e-25 119.0 494 30.0
BolC8t51612H Brassica oleracea HOM05D003733 ORTHO05D004035 8.1e-25 119.0 494 30.0
C04p52030 Brassica napus HOM05D002219 ORTHO05D002713 1.4e-24 118.2 462 30.1
Carub.0004s0185 Capsella rubella HOM05D003733 ORTHO05D004035 3.1e-24 117.1 180 44.4
CDE10G0903 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 3.1e-24 117.1 434 32.7
A09p57340 Brassica napus HOM05D003733 ORTHO05D004035 2.0e-23 114.4 493 28.6
A04p17190 Brassica napus HOM05D002219 ORTHO05D002713 4.4e-23 113.2 462 29.4
BraA04t17347Z Brassica rapa HOM05D003733 ORTHO05D004035 7.6e-23 112.5 462 29.0
BolC4t26775H Brassica oleracea HOM05D003733 ORTHO05D004035 1.3e-22 111.7 461 28.9
CARHR114000 Cardamine hirsuta HOM05D003733 ORTHO05D004035 1.7e-22 111.3 469 30.1
BraA09t41127Z Brassica rapa HOM05D003733 ORTHO05D004035 7.1e-21 105.9 490 29.4
Hund23622 Selenicereus undatus HOM05D003733 ORTHO05D004035 4.6e-20 103.2 211 39.8
SEGI_33741 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 7.8e-20 102.4 413 30.3
AT2G22720 Arabidopsis thaliana HOM05D003733 ORTHO05D004035 1.0e-19 102.1 520 26.5
CDE10G0649 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 1.3e-19 101.7 458 29.9
Sc16g0000790 Simmondsia chinensis HOM05D003733 ORTHO05D004035 5.1e-19 99.8 130 47.7
CARHR246250 Cardamine hirsuta HOM05D003733 ORTHO05D004035 3.3e-18 97.1 355 30.1
Lalb_Chr05g0216131 Lupinus albus HOM05D001142 ORTHO05D003453 1.5e-15 88.2 312 30.8
Dinv36994 Davidia involucrata HOM05D003733 ORTHO05D004035 2.6e-15 87.4 141 44.7
Os11g0296800 Oryza sativa ssp. japonica HOM05D003733 ORTHO05D004035 5.8e-15 86.3 472 29.0
Sp7g35500 Schrenkiella parvula HOM05D003733 ORTHO05D004035 3.8e-14 83.6 367 29.7
Cpa.g.sc129.28 Carica papaya HOM05D003733 ORTHO05D004035 4.9e-14 83.2 345 28.4
Zm00001eb429410 Zea mays HOM05D003733 ORTHO05D004035 2.7e-12 77.4 475 27.4
C01p01330 Brassica napus HOM05D003733 ORTHO05D004035 3.5e-12 77.0 376 29.5
Thhalv10000080m.g Eutrema salsugineum HOM05D003733 ORTHO05D004035 4.6e-12 76.6 493 24.7
Aqoxy6G00872 Aquilegia oxysepala HOM05D003733 ORTHO05D004035 6.0e-12 76.3 343 28.6
SEGI_29083 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 1.8e-11 74.7 464 26.1
Os02g0664400 Oryza sativa ssp. japonica HOM05D003733 ORTHO05D004035 5.1e-11 73.2 371 29.4
A01p01170 Brassica napus HOM05D003733 ORTHO05D004035 1.1e-10 72.0 366 27.3
AT4G37860 Arabidopsis thaliana HOM05D003733 ORTHO05D004035 1.5e-10 71.6 358 26.8
AL7G12820 Arabidopsis lyrata HOM05D003733 ORTHO05D004035 1.9e-10 71.2 182 34.6
SHI12093 Sapria himalayana HOM05D003733 ORTHO05D004035 7.4e-10 69.3 125 41.6
Thhalv10026061m.g Eutrema salsugineum HOM05D003733 ORTHO05D004035 9.6e-10 68.9 320 26.2
BolC1t00129H Brassica oleracea HOM05D003733 ORTHO05D004035 1.6e-09 68.2 376 27.9
Manes.06G161600 Manihot esculenta HOM05D003733 ORTHO05D004035 4.8e-09 66.6 378 26.5
Prupe.1G068500 Prunus persica HOM05D003733 ORTHO05D004035 6.2e-09 66.2 135 40.0
COL.COLO4_36255 Corchorus olitorius HOM05D003733 ORTHO05D004035 8.1e-09 65.9 391 27.6
Potri.001G257300 Populus trichocarpa HOM05D003733 ORTHO05D004035 1.8e-08 64.7 400 26.0
CANSAT11G2490 Cannabis sativa HOM05D003733 ORTHO05D004035 4.0e-08 63.5 435 26.2
BcaNung00967 Brassica carinata HOM05D003733 ORTHO05D004035 6.9e-08 62.8 373 27.9
BraA01t00115Z Brassica rapa HOM05D003733 ORTHO05D004035 1.2e-07 62.0 382 26.2
Prupe.2G308100 Prunus persica HOM05D003733 ORTHO05D004035 2.6e-07 60.8 198 34.3
MD02G1269600 Malus domestica HOM05D003733 ORTHO05D004035 4.5e-07 60.1 136 35.3
Dinv36995 Davidia involucrata HOM05D003733 ORTHO05D004035 1.3e-06 58.5 107 41.1
SGA_v2.0_scaffold55G19776 Striga asiatica HOM05D003733 ORTHO05D004035 1.7e-06 58.2 143 32.9


User provided reference genes

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