Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 3.5e-25 117.5 58 100.0
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 1.9e-18 95.1 48 95.8
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 2.4e-18 94.7 48 93.8
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.4e-18 94.7 49 89.8
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 5.4e-18 93.6 48 93.8
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 5.4e-18 93.6 48 93.8
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 7.0e-18 93.2 48 93.8
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 1.2e-17 92.4 48 93.8
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 1.2e-17 92.4 47 93.6
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.2e-17 92.4 48 93.8
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.2e-17 92.4 48 93.8
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-17 92.4 48 93.8
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-17 92.4 48 93.8
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-17 92.4 48 93.8
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-17 92.4 48 93.8
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.2e-17 92.4 48 93.8
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.2e-17 92.4 48 93.8
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-17 92.0 46 95.7
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 2.7e-17 91.3 48 91.7
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 2.7e-17 91.3 48 91.7
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 4.6e-17 90.5 48 91.7
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 4.6e-17 90.5 48 91.7
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 4.6e-17 90.5 47 93.6
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 6.0e-17 90.1 48 91.7
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 7.8e-17 89.7 49 87.8
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 7.8e-17 89.7 48 91.7
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 7.8e-17 89.7 48 91.7
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 7.8e-17 89.7 48 91.7
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 7.8e-17 89.7 48 91.7
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 7.8e-17 89.7 48 91.7
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 7.8e-17 89.7 48 91.7
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 7.8e-17 89.7 48 91.7
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 7.8e-17 89.7 48 91.7
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 1.3e-16 89.0 48 91.7
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 1.3e-16 89.0 52 84.6
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 1.3e-16 89.0 48 89.6
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.7e-16 88.6 48 89.6
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.7e-16 88.6 48 89.6
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.9e-16 87.4 53 81.1
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.9e-16 87.4 48 89.6
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.9e-16 87.4 48 89.6
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 5.0e-16 87.0 44 95.5
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 1.5e-15 85.5 46 89.1
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 1.5e-15 85.5 47 89.4
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.5e-15 85.5 48 89.6
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.5e-15 85.5 48 85.4
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.9e-15 85.1 48 85.4
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.5e-15 84.7 49 89.8
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 9.5e-15 82.8 46 84.8
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 2.1e-14 81.6 48 85.4
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-13 79.3 42 90.5
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 1.1e-13 79.3 41 92.7
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 1.8e-13 78.6 45 84.4
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 8.9e-13 76.3 38 97.4
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.2e-12 75.9 41 90.2
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.5e-12 75.5 41 87.8
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 2.0e-12 75.1 43 88.4
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 3.4e-12 74.3 39 92.3
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 9.8e-12 72.8 39 89.7
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.3e-11 72.4 39 89.7
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 5.4e-10 67.0 48 75.0
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 3.5e-09 64.3 32 96.9
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 3.5e-09 64.3 32 96.9
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 3.5e-09 64.3 32 96.9
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 4.6e-09 63.9 41 78.0
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.3e-08 62.4 39 82.1


User provided reference genes

Program Settings