Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054666.1 Olea europaea HOM05D002037 ORTHO05D005586 3.4e-65 251.5 126 100.0
Lj1g0005088 Lotus japonicus HOM05D002037 ORTHO05D005586 1.3e-11 73.6 66 60.6
Eucgr.C02143 Eucalyptus grandis HOM05D002037 ORTHO05D005586 1.6e-11 73.2 66 59.1
Glyma.04G073800 Glycine max HOM05D002037 ORTHO05D005586 2.1e-11 72.8 66 59.1
Oeu017567.1 Olea europaea HOM05D004521 ORTHO05D288496 2.1e-11 72.8 76 44.7
Oeu057268.1 Olea europaea HOM05D004521 ORTHO05D288105 3.6e-11 72.0 144 34.0
Ca_15684_v3 Cicer arietinum L. HOM05D002037 ORTHO05D005261 4.8e-11 71.6 66 60.6
Oeu023125.1 Olea europaea HOM05D004521 ORTHO05D000397 4.8e-11 71.6 70 51.4
Phvul.009G099600 Phaseolus vulgaris HOM05D002037 ORTHO05D005586 4.8e-11 71.6 66 59.1
Sed0022277 Sechium edule HOM05D002037 ORTHO05D005586 4.8e-11 71.6 64 60.9
VMungo1309G2917 Vigna mungo HOM05D002037 ORTHO05D005261 4.8e-11 71.6 66 59.1
MSTRG.23424 Avicennia marina HOM05D002037 ORTHO05D005586 6.2e-11 71.2 66 59.1
Glyma.06G074900 Glycine max HOM05D002037 ORTHO05D005586 6.2e-11 71.2 66 57.6
Lalb_Chr23g0268941 Lupinus albus HOM05D002037 ORTHO05D005586 6.2e-11 71.2 66 56.1
SGA_v2.0_scaffold231G43409 Striga asiatica HOM05D002037 ORTHO05D005586 6.2e-11 71.2 66 59.1
ClCG08G012830 Citrullus lanatus HOM05D002037 ORTHO05D005586 8.1e-11 70.9 64 60.9
MELO3C011208.2 Cucumis melo HOM05D002037 ORTHO05D005586 8.1e-11 70.9 64 60.9
CsaV3_2G031570 Cucumis sativus L. HOM05D002037 ORTHO05D005586 8.1e-11 70.9 64 60.9
Actinidia03569 Actinidia chinensis HOM05D002037 ORTHO05D005586 1.1e-10 70.5 69 53.6
Peaxi162Scf00178g00004 Petunia axillaris HOM05D002037 ORTHO05D005586 1.1e-10 70.5 64 57.8
TWI14G0248 Tripterygium wilfordii HOM05D002037 ORTHO05D005586 1.1e-10 70.5 66 57.6
PSO063G5534 Papaver somniferum HOM05D002037 ORTHO05D005586 1.8e-10 69.7 66 57.6
Peaxi162Scf00896g00012 Petunia axillaris HOM05D002037 ORTHO05D005586 1.8e-10 69.7 64 57.8
Sed0016385 Sechium edule HOM05D002037 ORTHO05D005586 1.8e-10 69.7 64 59.4
TPR.G12308 Trifolium pratense HOM05D002037 ORTHO05D005586 1.8e-10 69.7 66 57.6
CAN.G135.28 Capsicum annuum HOM05D002037 ORTHO05D005586 2.4e-10 69.3 64 59.4
Manes.07G077700 Manihot esculenta HOM05D002037 ORTHO05D005586 2.4e-10 69.3 64 57.8
Manes.10G056500 Manihot esculenta HOM05D002037 ORTHO05D005586 2.4e-10 69.3 64 57.8
Oeu019002.1 Olea europaea HOM05D002037 ORTHO05D005586 2.4e-10 69.3 47 74.5
Oeu048127.1 Olea europaea HOM05D002037 ORTHO05D005586 2.4e-10 69.3 66 56.1
Haze_21661 Corylus avellana HOM05D002037 ORTHO05D005586 3.1e-10 68.9 66 57.6
CSS0019677 Camellia sinensis var. sinensis HOM05D002037 ORTHO05D005586 4.0e-10 68.6 66 51.5
Actinidia14156 Actinidia chinensis HOM05D002037 ORTHO05D005586 5.3e-10 68.2 66 54.5
Haze_05098 Corylus avellana HOM05D002037 ORTHO05D005586 5.3e-10 68.2 64 57.8
Nitab4.5_0000320g0090 Nicotiana tabacum HOM05D002037 ORTHO05D005586 5.3e-10 68.2 64 57.8
Nitab4.5_0006112g0010 Nicotiana tabacum HOM05D002037 ORTHO05D005586 5.3e-10 68.2 64 57.8
Psat5g026120 Pisum sativum HOM05D002037 ORTHO05D005586 5.3e-10 68.2 50 70.0
SalBow6G1621 Salvia bowleyana HOM05D002037 ORTHO05D005586 5.3e-10 68.2 66 53.0
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 5.3e-10 68.2 66 53.0
Aqoxy5G02379 Aquilegia oxysepala HOM05D002037 ORTHO05D005586 6.9e-10 67.8 66 56.1
BcaC07g40367 Brassica carinata HOM05D002037 ORTHO05D005586 6.9e-10 67.8 47 72.3
C08p33110 Brassica napus HOM05D002037 ORTHO05D005586 6.9e-10 67.8 47 72.3
BolC8t50911H Brassica oleracea HOM05D002037 ORTHO05D005586 6.9e-10 67.8 47 72.3
Medtr3g108460 Medicago truncatula HOM05D002037 ORTHO05D005586 6.9e-10 67.8 47 74.5
Atru.chr7.2707 Acer truncatum HOM05D002037 ORTHO05D005586 9.0e-10 67.4 47 72.3
Oeu038491.1 Olea europaea HOM05D004521 ORTHO05D289903 9.0e-10 67.4 81 44.4
Solyc11g005620.1 Solanum lycopersicum HOM05D002037 ORTHO05D005586 9.0e-10 67.4 64 56.2
Sopen11g001580 Solanum pennellii HOM05D002037 ORTHO05D005586 9.0e-10 67.4 64 56.2
BcaC07g40389 Brassica carinata HOM05D002037 ORTHO05D005586 1.2e-09 67.0 47 72.3
A09p50430 Brassica napus HOM05D002037 ORTHO05D005586 1.2e-09 67.0 47 72.3
BraA09t40494Z Brassica rapa HOM05D002037 ORTHO05D005586 1.2e-09 67.0 47 72.3
Cfa013231 Carpinus fangiana HOM05D002037 ORTHO05D005586 1.2e-09 67.0 66 56.1
CiPaw.07G216400 Carya illinoinensis HOM05D002037 ORTHO05D005586 1.2e-09 67.0 66 57.6
Oeu008533.1 Olea europaea HOM05D004521 ORTHO05D286925 1.2e-09 67.0 70 48.6
TAR636G3119 Trochodendron aralioides HOM05D002037 ORTHO05D005586 1.2e-09 67.0 88 46.6
QL12p030933 Quercus lobata HOM05D002037 ORTHO05D005586 1.5e-09 66.6 63 57.1
RcHm_v2.0_Chr6g0312541 Rosa chinensis HOM05D002037 ORTHO05D005586 1.5e-09 66.6 64 54.7
PGSC0003DMG400003981 Solanum tuberosum HOM05D002037 ORTHO05D005586 1.5e-09 66.6 64 56.2
Thecc.08G172900 Theobroma cacao HOM05D002037 ORTHO05D005586 1.5e-09 66.6 64 54.7
GSVIVG01035586001 Vitis vinifera HOM05D002037 ORTHO05D005586 1.5e-09 66.6 66 53.0
Carub.0005s2440 Capsella rubella HOM05D002037 ORTHO05D005586 2.0e-09 66.2 47 70.2
CARHR167790 Cardamine hirsuta HOM05D002037 ORTHO05D005586 2.0e-09 66.2 47 70.2
Cpa.g.sc6.178 Carica papaya HOM05D002037 ORTHO05D005586 2.0e-09 66.2 47 70.2
FAN24G2569 Fragaria x ananassa HOM05D002037 ORTHO05D005586 2.0e-09 66.2 64 54.7
FAN27G1718 Fragaria x ananassa HOM05D002037 ORTHO05D005586 2.0e-09 66.2 64 54.7
Gohir.A13G118600 Gossypium hirsutum HOM05D002037 ORTHO05D005586 2.0e-09 66.2 50 66.0
Gohir.D13G122400 Gossypium hirsutum HOM05D002037 ORTHO05D005586 2.0e-09 66.2 50 66.0
Gorai.013G137200 Gossypium raimondii HOM05D002037 ORTHO05D005586 2.0e-09 66.2 50 66.0
Lj8A3T12 Lonicera japonica HOM05D002037 ORTHO05D005586 2.0e-09 66.2 64 56.2
Rhsim07G0172400 Rhododendron simsii HOM05D002037 ORTHO05D005586 2.0e-09 66.2 82 48.8
Rhsim07G0173100 Rhododendron simsii HOM05D002037 ORTHO05D005586 2.0e-09 66.2 82 48.8
RhsimUnG0016600 Rhododendron simsii HOM05D002037 ORTHO05D005586 2.0e-09 66.2 82 48.8
Aa31sc1187G30 Aethionema arabicum HOM05D002037 ORTHO05D005586 2.6e-09 65.9 47 70.2
Aa31sc992G40 Aethionema arabicum HOM05D002037 ORTHO05D005586 2.6e-09 65.9 47 70.2
Duzib177G0635 Durio zibethinus HOM05D002037 ORTHO05D005586 2.6e-09 65.9 64 54.7
Lsat_1_v5_gn_5_164581 Lactuca sativa HOM05D002037 ORTHO05D005586 2.6e-09 65.9 47 66.0
Rhsim01G0105900 Rhododendron simsii HOM05D002037 ORTHO05D005586 2.6e-09 65.9 82 48.8
THA.LOC104802261 Tarenaya hassleriana HOM05D002037 ORTHO05D005586 2.6e-09 65.9 47 70.2
Aqoxy6G01297 Aquilegia oxysepala HOM05D002037 ORTHO05D005586 3.4e-09 65.5 63 58.7
AUR62004328 Chenopodium quinoa HOM05D002037 ORTHO05D005586 3.4e-09 65.5 66 53.0
AUR62033316 Chenopodium quinoa HOM05D002037 ORTHO05D005586 3.4e-09 65.5 66 53.0
AUR62033343 Chenopodium quinoa HOM05D002037 ORTHO05D005586 3.4e-09 65.5 66 53.0
unitig_8.g3509 Utricularia gibba HOM05D002037 ORTHO05D005586 3.4e-09 65.5 47 70.2
vmacro20743 Vaccinium macrocarpon HOM05D002037 ORTHO05D005586 3.4e-09 65.5 66 51.5
CANSAT25G2792 Cannabis sativa HOM05D002037 ORTHO05D005586 4.5e-09 65.1 63 54.0
Ciclev10008739m.g Citrus clementina HOM05D002037 ORTHO05D005586 4.5e-09 65.1 75 50.7
Dinv09453 Davidia involucrata HOM05D002037 ORTHO05D005586 4.5e-09 65.1 66 53.0
Oeu058327.1 Olea europaea HOM05D004521 ORTHO05D291551 4.5e-09 65.1 70 50.0
Duzib116G0244 Durio zibethinus HOM05D002037 ORTHO05D005586 5.8e-09 64.7 66 53.0
Migut.F01615 Erythranthe guttata HOM05D002037 ORTHO05D005586 5.8e-09 64.7 47 68.1
Migut.H01099 Erythranthe guttata HOM05D002037 ORTHO05D005586 5.8e-09 64.7 47 68.1
FvH4_2g30500 Fragaria vesca HOM05D002037 ORTHO05D005586 5.8e-09 64.7 64 53.1
AL5G39140 Arabidopsis lyrata HOM05D002037 ORTHO05D005586 7.6e-09 64.3 47 68.1
Cc07_g16850 Coffea canephora HOM05D002037 ORTHO05D005586 7.6e-09 64.3 64 54.7
ECA234G1135 Erigeron canadensis HOM05D002037 ORTHO05D005586 7.6e-09 64.3 47 63.8
ECA248G2210 Erigeron canadensis HOM05D002037 ORTHO05D005586 7.6e-09 64.3 47 63.8
Thhalv10006042m.g Eutrema salsugineum HOM05D002037 ORTHO05D005586 7.6e-09 64.3 47 68.1
PGR102G0041 Punica granatum HOM05D002037 ORTHO05D005586 7.6e-09 64.3 47 72.3
Sp5g05030 Schrenkiella parvula HOM05D002037 ORTHO05D005586 7.6e-09 64.3 47 68.1
Ah.05g177530 Amaranthus hybridus HOM05D002037 ORTHO05D005586 9.9e-09 63.9 66 50.0
AT3G57560 Arabidopsis thaliana HOM05D002037 ORTHO05D005586 9.9e-09 63.9 47 66.0
MSTRG.2681 Avicennia marina HOM05D002037 ORTHO05D005586 9.9e-09 63.9 64 54.7
COL.COLO4_15466 Corchorus olitorius HOM05D002037 ORTHO05D005586 9.9e-09 63.9 64 53.1
DCAR_020609 Daucus carota HOM05D002037 ORTHO05D005586 9.9e-09 63.9 47 72.3
HanXRQChr10g0278011 Helianthus annuus HOM05D002037 ORTHO05D005586 1.3e-08 63.5 47 66.0
Hma1.2p1_1382F.1_g279370 Hydrangea macrophylla HOM05D002037 ORTHO05D005586 1.3e-08 63.5 66 51.5
Hma1.2p1_2176F.1_g316120 Hydrangea macrophylla HOM05D002037 ORTHO05D005586 1.3e-08 63.5 66 51.5
BcaB02g08309 Brassica carinata HOM05D002037 ORTHO05D005586 1.7e-08 63.2 47 70.2
BcaC02g09949 Brassica carinata HOM05D002037 ORTHO05D005586 1.7e-08 63.2 47 70.2
C04p34850 Brassica napus HOM05D002037 ORTHO05D005586 1.7e-08 63.2 47 70.2
BolC4t25037H Brassica oleracea HOM05D002037 ORTHO05D005586 1.7e-08 63.2 47 70.2
Oeu008267.1 Olea europaea HOM05D004521 ORTHO05D291794 1.7e-08 63.2 79 45.6
Prupe.1G463900 Prunus persica HOM05D002037 ORTHO05D005586 1.7e-08 63.2 64 54.7
Cc07_g17450 Coffea canephora HOM05D002037 ORTHO05D005586 2.2e-08 62.8 64 50.0
Nn1g00932 Nelumbo nucifera HOM05D002037 ORTHO05D005586 2.2e-08 62.8 47 66.0
Oeu022632.1 Olea europaea HOM05D004521 ORTHO05D010236 2.2e-08 62.8 70 45.7
Os02g0657600 Oryza sativa ssp. japonica HOM05D002037 ORTHO05D005586 2.2e-08 62.8 66 51.5
Potri.006G280100 Populus trichocarpa HOM05D002037 ORTHO05D005586 2.2e-08 62.8 47 66.0
Potri.018G001600 Populus trichocarpa HOM05D002037 ORTHO05D005586 2.2e-08 62.8 47 66.0
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 2.2e-08 62.8 47 66.0
SEGI_19958 Sequoiadendron giganteum HOM05D002037 ORTHO05D005586 2.2e-08 62.8 47 63.8
SEGI_35978 Sequoiadendron giganteum HOM05D002037 ORTHO05D005586 2.2e-08 62.8 47 63.8
FAN20G1771 Fragaria x ananassa HOM05D002037 ORTHO05D005586 2.9e-08 62.4 47 66.0
Ah.05g177540 Amaranthus hybridus HOM05D002037 ORTHO05D005586 3.8e-08 62.0 66 50.0
A04p03050 Brassica napus HOM05D002037 ORTHO05D005586 3.8e-08 62.0 47 68.1
BraA04t16028Z Brassica rapa HOM05D002037 ORTHO05D005586 3.8e-08 62.0 47 68.1
Hma1.2p1_0319F.1_g123860 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 3.8e-08 62.0 66 50.0
Oeu055298.1 Olea europaea HOM05D004521 ORTHO05D288369 4.9e-08 61.6 72 44.4
Os04g0550500 Oryza sativa ssp. japonica HOM05D002037 ORTHO05D005586 4.9e-08 61.6 66 50.0
Zm00001eb186530 Zea mays HOM05D002037 ORTHO05D005586 6.4e-08 61.2 79 41.8
ATR0782G017 Amborella trichopoda HOM05D002037 ORTHO05D005586 8.4e-08 60.8 47 55.3
Sc23g0004800 Simmondsia chinensis HOM05D002037 ORTHO05D005586 8.4e-08 60.8 47 63.8
MD08G1134500 Malus domestica HOM05D002037 ORTHO05D005586 1.1e-07 60.5 47 66.0
Sc23g0004440 Simmondsia chinensis HOM05D002037 ORTHO05D005586 1.1e-07 60.5 47 61.7
Oeu026647.1 Olea europaea HOM05D004521 ORTHO05D010236 2.4e-07 59.3 59 49.2
SHI12423 Sapria himalayana HOM05D002037 ORTHO05D005586 2.4e-07 59.3 45 66.7
Hund19379 Selenicereus undatus HOM05D002037 ORTHO05D005586 3.2e-07 58.9 66 48.5
Zm00001eb074610 Zea mays HOM05D002037 ORTHO05D005586 4.2e-07 58.5 64 48.4
HPP92_022465 Vanilla planifolia HOM05D002037 ORTHO05D005586 5.5e-07 58.2 64 46.9
Oeu019636.1 Olea europaea HOM05D004521 ORTHO05D010236 9.3e-07 57.4 60 50.0
Oeu042492.1 Olea europaea HOM05D004521 ORTHO05D010236 9.3e-07 57.4 57 50.9
AagrBONN_evm.TU.Sc2ySwM_344.3516 Anthoceros agrestis HOM05D002037 ORTHO05D005586 4.6e-06 55.1 47 53.2
HanXRQChr10g0278111 Helianthus annuus HOM05D002037 ORTHO05D005586 4.6e-06 55.1 47 63.8
HanXRQChr11g0330611 Helianthus annuus HOM05D002037 ORTHO05D005586 4.6e-06 55.1 47 63.8
Oeu028575.1 Olea europaea HOM05D004521 ORTHO05D290635 4.6e-06 55.1 60 50.0
Oeu043854.1 Olea europaea HOM05D004521 ORTHO05D287901 4.6e-06 55.1 48 54.2


User provided reference genes

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