Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054606.1 Olea europaea HOM05D000002 ORTHO05D000001 4.5e-80 301.2 152 100.0
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.2e-26 122.9 106 60.4
Oeu026778.1 Olea europaea HOM05D000002 ORTHO05D000001 1.4e-17 93.6 92 50.0
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 7.8e-16 87.8 86 51.2
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 7.8e-16 87.8 86 51.2
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-15 87.0 104 43.3
Oeu030761.1 Olea europaea HOM05D000164 ORTHO05D000096 3.8e-15 85.5 86 51.2
Oeu046724.1 Olea europaea HOM05D000002 ORTHO05D000001 8.6e-15 84.3 105 45.7
Oeu043920.1 Olea europaea HOM05D000002 ORTHO05D000001 2.5e-14 82.8 139 38.8
Oeu064106.1 Olea europaea HOM05D000002 ORTHO05D000001 2.5e-14 82.8 105 43.8
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-14 82.4 91 44.0
CiPaw.01G278500 Carya illinoinensis HOM05D000002 ORTHO05D000001 3.3e-14 82.4 103 41.7
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-14 82.0 87 46.0
Oeu054585.1 Olea europaea HOM05D000002 ORTHO05D000001 7.3e-14 81.3 91 46.2
ClCG07G007670 Citrullus lanatus HOM05D000002 ORTHO05D000001 4.7e-13 78.6 80 50.0
Lj1g0008265 Lotus japonicus HOM05D000002 ORTHO05D000047 8.0e-13 77.8 86 47.7
Lj3g0020805 Lotus japonicus HOM05D000002 ORTHO05D000047 8.0e-13 77.8 86 47.7
Oeu028933.2 Olea europaea HOM05D000002 ORTHO05D000001 8.0e-13 77.8 92 42.4
SHI27694 Sapria himalayana HOM05D000965 ORTHO05D000842 1.4e-12 77.0 98 50.0
CSS0015818 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-12 75.9 81 46.9
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 6.8e-12 74.7 91 42.9
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 6.8e-12 74.7 91 42.9
CAN.G313.15 Capsicum annuum HOM05D000002 ORTHO05D000001 8.9e-12 74.3 91 41.8
SHI01676 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-11 73.2 133 39.1
ClCG08G001840 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.4e-11 72.4 80 48.8
ClCG09G007490 Citrullus lanatus HOM05D000002 ORTHO05D000001 4.4e-11 72.0 85 45.9
SHI18136 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-11 72.0 139 36.7
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-11 72.0 91 42.9
GSVIVG01021964001 Vitis vinifera HOM05D000002 ORTHO05D000001 4.4e-11 72.0 139 38.1
Atru.chr11.465 Acer truncatum HOM05D000002 ORTHO05D000047 7.5e-11 71.2 92 41.3
ClCG07G007990 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.2e-10 69.7 85 44.7
ClCG11G008610 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.7e-10 68.9 91 40.7
Oeu052091.1 Olea europaea HOM05D000002 ORTHO05D000001 3.7e-10 68.9 90 42.2
SHI24549 Sapria himalayana HOM05D001091 ORTHO05D001020 8.3e-10 67.8 158 33.5
ClCG02G008720 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.1e-09 67.4 91 39.6
SHI31190 Sapria himalayana HOM05D000002 ORTHO05D000047 1.4e-09 67.0 96 43.8
CANSAT11G2001 Cannabis sativa HOM05D000013 ORTHO05D000011 4.1e-09 65.5 92 41.3
Sed0011426 Sechium edule HOM05D000002 ORTHO05D000001 4.1e-09 65.5 91 41.8
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 5.4e-09 65.1 62 50.0
Atru.chr6.2134 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-08 63.9 73 43.8
Manes.08G119311 Manihot esculenta HOM05D011157 ORTHO05D000001 1.6e-08 63.5 91 37.4
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 1.6e-08 63.5 91 36.3
ClCG09G017250 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.0e-08 63.2 83 43.4
VMungo0464G1194 Vigna mungo HOM05D000349 ORTHO05D001782 2.0e-08 63.2 92 41.3
Atru.chr10.720 Acer truncatum HOM05D000002 ORTHO05D000001 2.7e-08 62.8 91 38.5
Ah.04g151480 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.7e-08 62.8 83 43.4
Ah.07g199370 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.7e-08 62.8 85 45.9
TPR.G28137 Trifolium pratense HOM05D000002 ORTHO05D000001 2.7e-08 62.8 91 44.0
Thecc.08G074900 Theobroma cacao HOM05D011157 ORTHO05D013820 3.5e-08 62.4 90 37.8
SHI23210 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-08 61.2 98 43.9
Medtr8g011380 Medicago truncatula HOM05D011157 ORTHO05D013820 1.3e-07 60.5 69 44.9
Oeu020542.1 Olea europaea HOM05D000002 ORTHO05D000001 1.3e-07 60.5 70 44.3
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-07 60.1 61 49.2
AUR62039356 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.3e-07 59.7 97 39.2
AUR62042390 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.3e-07 59.7 97 39.2
SHI14083 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-07 59.7 94 35.1
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 59.3 103 37.9
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 59.3 103 37.9
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 59.3 103 37.9
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 59.3 103 37.9
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 59.3 103 37.9
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 59.3 103 37.9
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 59.3 103 37.9
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 59.3 103 37.9
AUR62016548 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.0e-07 59.3 91 40.7
Atru.chr13.2553 Acer truncatum HOM05D000002 ORTHO05D000001 5.0e-07 58.5 90 36.7
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-07 58.5 76 42.1
AUR62017512 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.6e-07 57.8 91 40.7
AUR62024864 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.6e-07 57.8 91 36.3
AUR62040109 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.6e-07 57.8 91 36.3
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 76 42.1
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.1e-06 57.4 79 38.0
SHI22941 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 57.4 93 39.8
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 57.0 76 42.1
AUR62003105 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.5e-06 57.0 91 40.7
Ah.01g008330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.9e-06 56.6 83 39.8
SHI27171 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-06 56.6 99 35.4
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 56.2 76 40.8
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 56.2 76 42.1
VMungo1309G1331 Vigna mungo HOM05D001522 ORTHO05D001547 2.5e-06 56.2 99 42.4
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-06 55.8 86 38.4
ClCG04G002150 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.3e-06 55.8 71 43.7
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 3.3e-06 55.8 94 34.0
Actinidia07495 Actinidia chinensis HOM05D000002 ORTHO05D000001 4.3e-06 55.5 86 38.4
Ah.04g154970 Amaranthus hybridus HOM05D000002 ORTHO05D000001 4.3e-06 55.5 86 38.4
SHI01664 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-06 55.5 91 36.3
Ah.13g070650 Amaranthus hybridus HOM05D000002 ORTHO05D000047 5.6e-06 55.1 83 38.6
SHI31221 Sapria himalayana HOM05D045375 ORTHO05D000001 5.6e-06 55.1 102 35.3
PGSC0003DMG400024980 Solanum tuberosum HOM05D000002 ORTHO05D000001 5.6e-06 55.1 92 33.7
TPR.G7457 Trifolium pratense HOM05D000002 ORTHO05D000001 5.6e-06 55.1 91 33.0
AUR62015586 Chenopodium quinoa HOM05D000002 ORTHO05D000047 7.3e-06 54.7 87 32.2
AUR62020303 Chenopodium quinoa HOM05D000002 ORTHO05D000047 7.3e-06 54.7 113 34.5
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 7.3e-06 54.7 89 36.0
Manes.13G009802 Manihot esculenta HOM05D000002 ORTHO05D000001 7.3e-06 54.7 91 34.1
QL04p083856 Quercus lobata HOM05D000002 ORTHO05D000001 9.5e-06 54.3 84 36.9
Sopen09g028090 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-06 54.3 94 33.0


User provided reference genes

Program Settings