Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 7.5e-147 523.9 269 100.0
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 2.7e-144 515.4 269 99.3
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 2.7e-144 515.4 269 99.3
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 8.1e-125 450.7 269 87.4
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 5.6e-102 374.8 269 70.6
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 3.6e-101 372.1 269 70.6
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 6.2e-101 371.3 269 70.6
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 2.0e-99 366.3 271 69.7
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.3e-98 363.6 271 69.7
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 5.4e-97 358.2 271 67.2
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 5.4e-97 358.2 271 67.5
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.2e-96 357.1 271 67.5
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 1.6e-96 356.7 269 68.4
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 1.8e-95 353.2 271 66.8
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 3.0e-95 352.4 269 67.7
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.9e-94 349.7 274 66.4
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.4e-92 343.6 269 67.7
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 3.4e-91 339.0 270 65.2
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 7.6e-91 337.8 250 70.0
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 6.0e-88 328.2 270 64.4
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 6.7e-87 324.7 241 68.9
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 8.7e-87 324.3 271 59.8
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 8.7e-87 324.3 271 62.7
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 1.1e-86 323.9 271 63.1
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.5e-86 323.6 271 63.1
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 1.9e-86 323.2 271 62.4
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 1.9e-86 323.2 271 61.6
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 9.6e-86 320.9 269 63.6
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 2.1e-85 319.7 272 60.7
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 4.8e-85 318.5 264 61.7
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 8.1e-85 317.8 268 63.8
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 3.1e-84 315.8 272 59.6
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 9.0e-84 314.3 269 61.3
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 9.0e-84 314.3 269 61.3
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 7.6e-83 311.2 271 59.4
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 7.6e-83 311.2 278 60.4
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 7.6e-83 311.2 272 58.8
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.3e-82 310.5 271 59.4
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.1e-81 307.4 269 61.0
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 2.5e-81 306.2 271 59.4
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 3.2e-81 305.8 269 59.9
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 5.5e-81 305.1 274 58.0
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 5.5e-81 305.1 272 59.6
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 9.3e-81 304.3 269 58.4
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 2.1e-80 303.1 248 62.1
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 2.1e-80 303.1 273 58.6
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 4.6e-80 302.0 253 60.9
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 3.9e-79 298.9 249 60.6
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.1e-78 297.4 273 57.9
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 4.3e-78 295.4 270 58.1
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 4.3e-78 295.4 270 60.7
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 5.7e-78 295.0 272 58.5
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 1.3e-77 293.9 233 63.1
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 8.2e-77 291.2 271 55.4
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 9.0e-76 287.7 271 57.2
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 6.5e-74 281.6 271 56.1
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 1.4e-73 280.4 271 57.2
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.9e-73 280.0 274 55.8
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 1.9e-73 280.0 214 69.2
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 2.5e-73 279.6 272 55.9
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 5.5e-73 278.5 274 56.9
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 5.5e-73 278.5 216 63.9
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 9.3e-73 277.7 273 56.8
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.7e-72 276.2 272 54.8
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.0e-71 274.2 272 55.5
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 8.7e-71 271.2 270 53.3
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 1.1e-70 270.8 272 54.8
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 1.5e-70 270.4 272 54.4
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.5e-70 270.4 269 56.5
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 1.9e-70 270.0 273 56.0
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.9e-70 270.0 273 54.9
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.9e-70 270.0 273 54.9
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 1.9e-70 270.0 275 54.5
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 1.9e-70 270.0 275 54.5
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 4.8e-69 265.4 191 71.2
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 1.1e-68 264.2 272 51.5
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 2.4e-68 263.1 270 53.7
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 4.5e-67 258.8 254 54.7
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 8.5e-66 254.6 278 51.4
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.4e-65 253.8 277 50.9
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 3.2e-65 252.7 283 51.2
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 5.5e-65 251.9 277 50.9
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 2.1e-64 250.0 272 53.3
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 2.3e-63 246.5 242 53.7
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 1.5e-62 243.8 275 51.6
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 3.3e-62 242.7 275 51.6
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 3.4e-59 232.6 272 47.1
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 1.6e-56 223.8 237 54.0
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.3e-53 214.2 245 50.2
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 2.6e-51 206.5 268 46.3
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 5.9e-51 205.3 268 46.3
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 3.8e-50 202.6 269 46.5
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 9.4e-49 198.0 273 43.6
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 2.7e-48 196.4 271 43.9
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 2.7e-48 196.4 271 43.9
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 2.7e-48 196.4 272 44.5
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 3.6e-48 196.1 222 53.6
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 3.0e-47 193.0 232 46.6
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 1.7e-45 187.2 269 43.9
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 2.2e-45 186.8 261 43.3
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 4.8e-45 185.7 249 45.0
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 8.2e-45 184.9 269 44.6
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 1.6e-40 170.6 199 50.3
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 2.1e-40 170.2 199 49.7
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 2.3e-39 166.8 270 39.6
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 7.7e-35 151.8 272 36.4
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 1.0e-34 151.4 240 40.0
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 8.8e-31 138.3 226 39.4
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 1.1e-28 131.3 159 45.9
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.8e-23 114.0 108 53.7
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 5.2e-23 112.5 231 35.5
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 6.8e-23 112.1 109 57.8
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 2.2e-21 107.1 88 58.0
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 2.2e-21 107.1 219 38.4
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 2.2e-21 107.1 218 36.2
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 2.9e-21 106.7 224 33.0
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 3.6e-16 89.7 118 45.8
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 3.1e-15 86.7 88 52.3
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 4.6e-11 72.8 48 66.7
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 6.2e-08 62.4 221 28.1
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 7.5e-06 55.5 37 67.6


User provided reference genes

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