Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 7.5e-147 523.9 268 100.0
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 7.5e-147 523.9 268 100.0
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.6e-144 516.2 269 99.3
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 2.2e-122 442.6 269 86.6
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 5.2e-100 368.2 269 70.3
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.5e-99 366.7 269 70.3
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.5e-99 366.7 269 70.3
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.4e-97 360.1 271 68.6
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 4.2e-97 358.6 271 69.0
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 4.6e-96 355.1 271 66.8
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 1.3e-95 353.6 271 66.8
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 6.6e-95 351.3 269 68.0
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.5e-94 350.1 271 66.8
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 5.6e-94 348.2 271 66.1
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 1.2e-93 347.1 269 66.5
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 3.1e-92 342.4 274 65.7
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 5.3e-92 341.7 269 67.7
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 4.2e-89 332.0 270 64.4
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 5.4e-89 331.6 250 69.6
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 8.7e-87 324.3 270 63.7
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 2.1e-85 319.7 271 59.4
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 2.8e-85 319.3 271 62.4
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 6.2e-85 318.2 271 62.7
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 6.2e-85 318.2 271 62.7
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 8.1e-85 317.8 241 68.0
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 8.1e-85 317.8 271 62.0
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 8.1e-85 317.8 271 61.3
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 4.0e-84 315.5 269 63.2
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 9.0e-84 314.3 272 60.3
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 2.6e-83 312.8 264 61.4
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 3.4e-83 312.4 268 63.4
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.3e-82 310.5 272 59.2
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 4.9e-82 308.5 269 61.0
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 4.9e-82 308.5 269 61.0
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.1e-81 307.4 271 59.0
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 2.4e-81 306.2 272 58.5
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 3.2e-81 305.8 271 59.0
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 3.2e-81 305.8 278 60.1
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 2.1e-80 303.1 271 59.0
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 3.5e-80 302.4 269 60.6
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.0e-79 300.8 269 59.1
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 2.3e-79 299.7 274 57.7
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 2.3e-79 299.7 269 58.0
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 3.0e-79 299.3 272 59.2
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 8.7e-79 297.7 248 61.7
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 8.7e-79 297.7 273 58.2
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 1.9e-78 296.6 253 60.5
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 5.6e-78 295.0 249 60.2
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 4.8e-77 292.0 273 57.5
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 1.8e-76 290.0 270 57.8
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 1.8e-76 290.0 272 58.1
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 3.1e-76 289.3 233 62.7
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 3.1e-76 289.3 270 60.4
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 1.2e-75 287.3 270 56.3
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 2.0e-75 286.6 271 55.0
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 8.4e-74 281.2 270 55.2
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 7.1e-73 278.1 214 68.7
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 4.6e-72 275.4 271 56.1
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 7.9e-72 274.6 272 55.5
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.0e-71 274.2 274 55.5
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 1.3e-71 273.9 274 56.6
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 1.8e-71 273.5 216 63.0
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 3.0e-71 272.7 273 56.4
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 8.7e-71 271.2 272 54.4
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.9e-70 270.0 269 56.5
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 3.3e-70 269.2 272 55.1
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 3.7e-69 265.8 272 54.4
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 4.8e-69 265.4 270 53.0
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 4.8e-69 265.4 272 54.0
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 6.2e-69 265.0 273 55.7
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 6.2e-69 265.0 273 54.6
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 6.2e-69 265.0 273 54.6
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 6.2e-69 265.0 275 54.2
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 6.2e-69 265.0 275 54.2
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 1.4e-68 263.8 191 70.7
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.5e-67 260.4 270 53.0
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 2.0e-67 260.0 254 54.7
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 2.6e-67 259.6 272 51.1
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 1.1e-65 254.2 278 51.1
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 1.4e-65 253.8 283 51.2
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.2e-64 250.8 277 50.2
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 4.6e-64 248.8 277 50.2
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 6.7e-63 245.0 272 52.9
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 2.5e-62 243.0 242 52.9
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 6.3e-61 238.4 275 51.6
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 1.4e-60 237.3 275 51.6
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 2.5e-57 226.5 272 46.7
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 7.9e-56 221.5 237 53.6
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 7.4e-54 214.9 245 49.8
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 6.5e-50 201.8 268 46.3
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 6.5e-50 201.8 268 45.9
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 1.9e-49 200.3 268 45.9
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 3.6e-48 196.1 273 43.2
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 6.1e-48 195.3 272 44.1
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 1.0e-47 194.5 158 63.9
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 1.4e-47 194.1 232 47.0
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 1.8e-47 193.7 271 43.2
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 1.8e-47 193.7 271 43.2
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 3.7e-45 186.0 268 43.7
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 1.4e-44 184.1 268 44.4
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 7.0e-44 181.8 248 44.4
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 9.1e-44 181.4 261 42.9
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 4.7e-40 169.1 199 49.7
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 6.1e-40 168.7 199 49.2
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 1.4e-39 167.5 268 38.8
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 2.2e-34 150.2 240 39.6
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 6.5e-34 148.7 272 35.7
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 1.8e-31 140.6 225 39.1
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 3.1e-28 129.8 159 45.3
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 5.2e-23 112.5 109 57.8
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 6.8e-23 112.1 231 35.1
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 2.0e-22 110.5 108 52.8
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 2.8e-21 106.7 218 36.7
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 3.7e-21 106.3 218 38.1
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 1.1e-20 104.8 224 32.1
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 2.4e-20 103.6 88 58.0
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 1.0e-15 88.2 117 45.3
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 1.2e-14 84.7 87 51.7
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 4.5e-11 72.8 48 66.7
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 8.0e-08 62.0 221 27.1
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 5.8e-06 55.8 37 67.6


User provided reference genes

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