Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054535.1 Olea europaea HOM05D002342 ORTHO05D002407 1.4e-131 473.0 248 100.0
Oeu054534.1 Olea europaea HOM05D002342 ORTHO05D002407 1.2e-130 469.9 248 99.2
Dinv27218 Davidia involucrata HOM05D002342 ORTHO05D002407 8.4e-52 208.0 254 48.8
Lj6A526G34 Lonicera japonica HOM05D002342 ORTHO05D002407 8.4e-52 208.0 249 50.2
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 3.2e-51 206.1 257 47.5
Actinidia23411 Actinidia chinensis HOM05D002342 ORTHO05D002407 1.2e-50 204.1 257 48.6
Cfa014941 Carpinus fangiana HOM05D002342 ORTHO05D002407 1.7e-49 200.3 238 50.0
Migut.G00912 Erythranthe guttata HOM05D002342 ORTHO05D002407 1.5e-48 197.2 247 47.8
Dinv38212 Davidia involucrata HOM05D002342 ORTHO05D002407 5.6e-48 195.3 257 44.7
Manes.03G146000 Manihot esculenta HOM05D002342 ORTHO05D002407 5.6e-48 195.3 265 44.9
TWI09G0668 Tripterygium wilfordii HOM05D002342 ORTHO05D002407 1.3e-47 194.1 254 45.3
TAR365G0670 Trochodendron aralioides HOM05D002342 ORTHO05D002407 1.6e-47 193.7 251 44.6
GSVIVG01020920001 Vitis vinifera HOM05D002342 ORTHO05D002407 1.6e-47 193.7 254 45.7
CSS0000956 Camellia sinensis var. sinensis HOM05D002342 ORTHO05D002407 4.8e-47 192.2 257 45.5
Migut.N00402 Erythranthe guttata HOM05D002342 ORTHO05D002407 6.2e-47 191.8 253 43.1
Prupe.1G159200 Prunus persica HOM05D002342 ORTHO05D002407 1.1e-46 191.0 245 47.8
Cc03_g08030 Coffea canephora HOM05D002342 ORTHO05D002407 1.4e-46 190.7 269 43.9
HanXRQChr16g0498001 Helianthus annuus HOM05D002342 ORTHO05D002407 1.4e-46 190.7 251 45.4
TAR365G0690 Trochodendron aralioides HOM05D002342 ORTHO05D002407 1.4e-46 190.7 251 44.2
Medtr8g085280 Medicago truncatula HOM05D002342 ORTHO05D002407 4.0e-46 189.1 257 44.4
Ca_17971_v3 Cicer arietinum L. HOM05D002342 ORTHO05D002407 6.9e-46 188.3 253 43.9
HanXRQChr02g0059031 Helianthus annuus HOM05D002342 ORTHO05D002407 9.0e-46 188.0 249 46.2
Lsat_1_v5_gn_6_60921 Lactuca sativa HOM05D002342 ORTHO05D002407 9.0e-46 188.0 219 49.3
Oeu055768.2 Olea europaea HOM05D002342 ORTHO05D002407 9.0e-46 188.0 254 45.3
Psat7g074440 Pisum sativum HOM05D002342 ORTHO05D002407 2.0e-45 186.8 256 42.6
Ciclev10004121m.g Citrus clementina HOM05D002342 ORTHO05D002407 3.4e-45 186.0 254 45.3
ClCG05G003260 Citrullus lanatus HOM05D002342 ORTHO05D002407 4.5e-45 185.7 252 44.4
Sed0020750 Sechium edule HOM05D002342 ORTHO05D002407 5.8e-45 185.3 252 44.0
Lj6A525G37 Lonicera japonica HOM05D002342 ORTHO05D002407 7.6e-45 184.9 219 49.8
Lj6C526T4 Lonicera japonica HOM05D002342 ORTHO05D002407 7.6e-45 184.9 231 48.5
Hma1.2p1_0383F.1_g140360 Hydrangea macrophylla HOM05D002342 ORTHO05D002407 9.9e-45 184.5 191 52.4
Atru.chr4.1618 Acer truncatum HOM05D002342 ORTHO05D002407 1.3e-44 184.1 218 49.1
Nitab4.5_0000401g0100 Nicotiana tabacum HOM05D002342 ORTHO05D002407 1.7e-44 183.7 253 43.9
RcHm_v2.0_Chr6g0275261 Rosa chinensis HOM05D002342 ORTHO05D002407 2.9e-44 183.0 215 47.9
CiPaw.01G119200 Carya illinoinensis HOM05D002342 ORTHO05D002407 3.8e-44 182.6 129 68.2
Nn1g07933 Nelumbo nucifera HOM05D002342 ORTHO05D002407 4.9e-44 182.2 262 41.6
TPR.G11869 Trifolium pratense HOM05D002342 ORTHO05D002407 4.9e-44 182.2 255 42.7
Lj6A517T27 Lonicera japonica HOM05D002342 ORTHO05D002407 8.4e-44 181.4 203 50.7
DCAR_002789 Daucus carota HOM05D002342 ORTHO05D002407 2.4e-43 179.9 254 43.7
ECA233G4700 Erigeron canadensis HOM05D002342 ORTHO05D002407 2.4e-43 179.9 245 44.5
Duzib212G0344 Durio zibethinus HOM05D002342 ORTHO05D002407 5.4e-43 178.7 235 42.6
FAN15G0433 Fragaria x ananassa HOM05D002342 ORTHO05D002407 7.1e-43 178.3 205 47.3
VMungo1127G1482 Vigna mungo HOM05D002342 ORTHO05D002407 1.2e-42 177.6 256 39.8
Haze_11629 Corylus avellana HOM05D002342 ORTHO05D002407 2.1e-42 176.8 339 36.9
SGA_v2.0_scaffold31G12585 Striga asiatica HOM05D002342 ORTHO05D002407 2.1e-42 176.8 192 49.5
arahy.Tifrunner.gnm1.ann1.ZGTC82 Arachis hypogaea HOM05D002342 ORTHO05D002407 3.5e-42 176.0 255 40.8
Lsat_1_v5_gn_6_60880 Lactuca sativa HOM05D002342 ORTHO05D002407 3.5e-42 176.0 226 49.6
Hund05344 Selenicereus undatus HOM05D002342 ORTHO05D002407 3.5e-42 176.0 237 43.5
FvH4_2g13620 Fragaria vesca HOM05D002342 ORTHO05D002407 6.0e-42 175.3 235 44.7
vmacro00455 Vaccinium macrocarpon HOM05D002342 ORTHO05D002407 1.0e-41 174.5 241 41.5
MBI04_g21151_MAGBIO Magnolia biondii HOM05D002342 ORTHO05D002407 1.3e-41 174.1 261 41.8
Glyma.08G111400 Glycine max HOM05D002342 ORTHO05D002407 1.8e-41 173.7 147 56.5
DCAR_030811 Daucus carota HOM05D002342 ORTHO05D002407 2.3e-41 173.3 184 50.5
FAN24G1108 Fragaria x ananassa HOM05D002342 ORTHO05D002407 2.3e-41 173.3 235 44.7
MD04G1012900 Malus domestica HOM05D002342 ORTHO05D002407 3.9e-41 172.6 254 43.3
Sabra16G0200600 Salix brachista HOM05D002342 ORTHO05D002407 3.9e-41 172.6 272 41.5
PGR083G1386 Punica granatum HOM05D002342 ORTHO05D002407 5.1e-41 172.2 212 46.7
QL05p014243 Quercus lobata HOM05D002342 ORTHO05D002407 5.1e-41 172.2 249 44.6
RcHm_v2.0_Chr4g0414341 Rosa chinensis HOM05D002342 ORTHO05D002407 6.7e-41 171.8 232 44.4
Lj4g0001754 Lotus japonicus HOM05D002342 ORTHO05D002407 8.7e-41 171.4 255 40.0
Sc13g0000230 Simmondsia chinensis HOM05D002342 ORTHO05D002407 8.7e-41 171.4 157 54.8
Haze_11626 Corylus avellana HOM05D002342 ORTHO05D002407 1.1e-40 171.0 134 61.9
QL05p014269 Quercus lobata HOM05D002342 ORTHO05D002407 1.1e-40 171.0 242 40.9
Atru.chr4.1628 Acer truncatum HOM05D002342 ORTHO05D002407 1.5e-40 170.6 170 53.5
HanXRQChr11g0339061 Helianthus annuus HOM05D002342 ORTHO05D002407 1.9e-40 170.2 147 61.2
Potri.001G317200 Populus trichocarpa HOM05D002342 ORTHO05D002407 2.5e-40 169.9 272 41.2
MELO3C006307.2 Cucumis melo HOM05D002342 ORTHO05D002407 3.3e-40 169.5 253 41.5
FAN17G0157 Fragaria x ananassa HOM05D002342 ORTHO05D002407 4.3e-40 169.1 147 57.1
QL05p014435 Quercus lobata HOM05D002342 ORTHO05D002407 4.3e-40 169.1 249 43.4
QL05p014602 Quercus lobata HOM05D002342 ORTHO05D002407 5.6e-40 168.7 246 40.2
Sopen09g034970 Solanum pennellii HOM05D002342 ORTHO05D002407 7.4e-40 168.3 232 42.7
Atru.chr4.1623 Acer truncatum HOM05D002342 ORTHO05D002407 1.3e-39 167.5 173 52.6
CsaV3_3G010890 Cucumis sativus L. HOM05D002342 ORTHO05D002407 2.1e-39 166.8 253 42.3
Hma1.2p1_0383F.1_g140570 Hydrangea macrophylla HOM05D002342 ORTHO05D002407 4.8e-39 165.6 236 44.1
Aa31LG9G3890 Aethionema arabicum HOM05D002342 ORTHO05D002407 6.2e-39 165.2 209 45.5
ECA233G6204 Erigeron canadensis HOM05D002342 ORTHO05D002407 8.1e-39 164.9 165 52.1
Rhsim09G0058500 Rhododendron simsii HOM05D002342 ORTHO05D002407 8.1e-39 164.9 308 36.7
Thecc.04G199700 Theobroma cacao HOM05D002342 ORTHO05D002407 8.1e-39 164.9 244 38.5
Phvul.003G291200 Phaseolus vulgaris HOM05D002342 ORTHO05D002407 1.4e-38 164.1 257 39.7
RcHm_v2.0_Chr4g0414351 Rosa chinensis HOM05D002342 ORTHO05D002407 1.4e-38 164.1 263 40.7
QL05p014183 Quercus lobata HOM05D002342 ORTHO05D002407 1.8e-38 163.7 274 39.1
Gohir.D02G113900 Gossypium hirsutum HOM05D002342 ORTHO05D002407 2.4e-38 163.3 244 39.3
Peaxi162Scf00047g00342 Petunia axillaris HOM05D002342 ORTHO05D002407 3.1e-38 162.9 237 42.6
FAN07G2373 Fragaria x ananassa HOM05D002342 ORTHO05D002407 4.0e-38 162.5 159 52.8
FAN12G2750 Fragaria x ananassa HOM05D002342 ORTHO05D002407 4.0e-38 162.5 159 52.8
Lj6C516G5 Lonicera japonica HOM05D002342 ORTHO05D002407 4.0e-38 162.5 212 46.2
Gorai.005G129600 Gossypium raimondii HOM05D002342 ORTHO05D002407 5.3e-38 162.2 244 39.3
Migut.N01843 Erythranthe guttata HOM05D002342 ORTHO05D002407 6.9e-38 161.8 226 44.2
FAN22G0412 Fragaria x ananassa HOM05D002342 ORTHO05D002407 6.9e-38 161.8 159 53.5
FvH4_4g13660 Fragaria vesca HOM05D002342 ORTHO05D002407 9.0e-38 161.4 159 52.2
MD04G1013300 Malus domestica HOM05D002342 ORTHO05D002407 1.2e-37 161.0 221 43.9
unitig_8.g4999 Utricularia gibba HOM05D002342 ORTHO05D002407 1.5e-37 160.6 245 40.4
VMungo1383G2708 Vigna mungo HOM05D002342 ORTHO05D002407 7.6e-37 158.3 241 38.2
Prupe.1G159100 Prunus persica HOM05D002342 ORTHO05D002407 1.7e-36 157.1 244 43.0
A08p06660 Brassica napus HOM05D002342 ORTHO05D002407 2.2e-36 156.8 209 44.5
BraA08t32682Z Brassica rapa HOM05D002342 ORTHO05D002407 2.2e-36 156.8 209 44.5
SHI00028 Sapria himalayana HOM05D002342 ORTHO05D002407 2.2e-36 156.8 199 45.7
Cpa.g.c27575.1 Carica papaya HOM05D002342 ORTHO05D002407 3.8e-36 156.0 129 57.4
BcaC07g37335 Brassica carinata HOM05D002342 ORTHO05D002407 4.9e-36 155.6 209 44.0
BolC8t47622H Brassica oleracea HOM05D002342 ORTHO05D002407 4.9e-36 155.6 209 44.0
PSO017G5596 Papaver somniferum HOM05D002342 ORTHO05D002407 6.4e-36 155.2 263 39.5
PSO063G4028 Papaver somniferum HOM05D002342 ORTHO05D002407 6.4e-36 155.2 266 39.1
Sp7g11520 Schrenkiella parvula HOM05D002342 ORTHO05D002407 8.4e-36 154.8 219 42.5
Carub.0007s2871 Capsella rubella HOM05D002342 ORTHO05D002407 1.1e-35 154.5 219 42.5
MD04G1012800 Malus domestica HOM05D002342 ORTHO05D002407 3.2e-35 152.9 240 39.6
THA.LOC104804807 Tarenaya hassleriana HOM05D002342 ORTHO05D002407 3.2e-35 152.9 205 43.9
Carub.0001s0765 Capsella rubella HOM05D002342 ORTHO05D002407 5.5e-35 152.1 223 42.6
Thhalv10006953m.g Eutrema salsugineum HOM05D002342 ORTHO05D002407 5.5e-35 152.1 231 39.4
Gohir.A03G095600 Gossypium hirsutum HOM05D002342 ORTHO05D002407 5.5e-35 152.1 244 37.3
Aqoxy2G03980 Aquilegia oxysepala HOM05D002342 ORTHO05D002407 7.1e-35 151.8 246 39.4
HPP92_020882 Vanilla planifolia HOM05D002342 ORTHO05D002407 7.1e-35 151.8 191 44.0
AL1G18700 Arabidopsis lyrata HOM05D002342 ORTHO05D002407 1.2e-34 151.0 203 42.4
BcaB04g17657 Brassica carinata HOM05D002342 ORTHO05D002407 1.6e-34 150.6 216 41.2
AT4G13750 Arabidopsis thaliana HOM05D002342 ORTHO05D002407 2.1e-34 150.2 214 42.1
CANSAT78G2520 Cannabis sativa HOM05D002342 ORTHO05D002407 3.5e-34 149.4 233 38.2
AL7G42760 Arabidopsis lyrata HOM05D002342 ORTHO05D002407 6.0e-34 148.7 223 40.8
C08p07740 Brassica napus HOM05D002342 ORTHO05D002407 6.0e-34 148.7 183 45.9
BraA06t23740Z Brassica rapa HOM05D002342 ORTHO05D002407 7.9e-34 148.3 209 41.1
CARHR008150 Cardamine hirsuta HOM05D002342 ORTHO05D002407 7.9e-34 148.3 211 42.2
Lalb_Chr12g0205531 Lupinus albus HOM05D002342 ORTHO05D002407 1.3e-33 147.5 129 54.3
A06p05320 Brassica napus HOM05D002342 ORTHO05D002407 3.0e-33 146.4 166 45.8
BcaB07g34076 Brassica carinata HOM05D000444 ORTHO05D000489 3.9e-33 146.0 209 42.6
C05p06400 Brassica napus HOM05D002342 ORTHO05D002407 3.9e-33 146.0 182 44.5
BolC5t29395H Brassica oleracea HOM05D002342 ORTHO05D002407 8.7e-33 144.8 165 46.1
CARHR219530 Cardamine hirsuta HOM05D002342 ORTHO05D002407 8.7e-33 144.8 217 41.5
BcaB07g34075 Brassica carinata HOM05D002342 ORTHO05D002407 2.5e-32 143.3 235 38.7
FvH4_4g13620 Fragaria vesca HOM05D002342 ORTHO05D002407 3.3e-32 142.9 212 40.6
Os03g0803800 Oryza sativa ssp. japonica HOM05D002342 ORTHO05D002407 3.3e-32 142.9 144 47.2
AT1G08300 Arabidopsis thaliana HOM05D002342 ORTHO05D002407 5.6e-32 142.1 224 39.7
Ah.14g086370 Amaranthus hybridus HOM05D002342 ORTHO05D002407 7.4e-32 141.7 184 42.4
Migut.N01844 Erythranthe guttata HOM05D002342 ORTHO05D002407 1.3e-31 141.0 190 46.3
Thhalv10024181m.g Eutrema salsugineum HOM05D002342 ORTHO05D002407 1.3e-31 141.0 220 40.0
Zm00001eb061370 Zea mays HOM05D002342 ORTHO05D002407 2.8e-31 139.8 250 36.0
EL10Ac3g07477 Beta vulgaris HOM05D002342 ORTHO05D002407 5.3e-30 135.6 251 31.1
SEGI_11248 Sequoiadendron giganteum HOM05D002342 ORTHO05D002407 5.3e-30 135.6 151 42.4
Sp1g06930 Schrenkiella parvula HOM05D002342 ORTHO05D002407 2.6e-29 133.3 200 41.5
ATR0829G161 Amborella trichopoda HOM05D002342 ORTHO05D002407 5.8e-29 132.1 149 43.6
COL.COLO4_20180 Corchorus olitorius HOM05D002342 ORTHO05D002407 2.5e-27 126.7 235 33.6
AUR62020836 Chenopodium quinoa HOM05D002342 ORTHO05D002407 5.5e-27 125.6 221 34.4
Lj6C522G10 Lonicera japonica HOM05D002342 ORTHO05D002407 2.1e-26 123.6 105 58.1
AUR62018583 Chenopodium quinoa HOM05D002342 ORTHO05D002407 2.3e-25 120.2 220 33.2
PSO017G1666 Papaver somniferum HOM05D002342 ORTHO05D002407 9.7e-24 114.8 156 41.0
Pp3c21_20720 Physcomitrium patens HOM05D002342 ORTHO05D002407 1.3e-23 114.4 201 36.8
PSO063G7363 Papaver somniferum HOM05D002342 ORTHO05D002407 2.2e-23 113.6 259 34.0
Mapoly0105s0052 Marchantia polymorpha HOM05D002342 ORTHO05D002407 6.9e-22 108.6 149 40.3
Eucgr.H02752 Eucalyptus grandis HOM05D002342 ORTHO05D002407 2.2e-20 103.6 129 45.7
Eucgr.H02758 Eucalyptus grandis HOM05D002342 ORTHO05D002407 2.2e-20 103.6 129 45.7
HPP92_003883 Vanilla planifolia HOM05D002342 ORTHO05D002407 5.9e-13 79.0 147 33.3
AagrBONN_evm.TU.Sc2ySwM_228.1730 Anthoceros agrestis HOM05D002342 ORTHO05D002407 8.5e-12 75.1 145 29.7
FAN22G1019 Fragaria x ananassa HOM05D002342 ORTHO05D002407 1.4e-11 74.3 181 30.9
CAN.G1333.6 Capsicum annuum HOM05D002342 ORTHO05D002407 7.2e-11 72.0 139 33.8
Prupe.1G358100 Prunus persica HOM05D002342 ORTHO05D002407 1.3e-07 61.2 167 33.5


User provided reference genes

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