Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054429.1 Olea europaea HOM05D007902 ORTHO05D009839 6.8e-87 323.9 161 100.0
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 6.7e-34 147.9 159 51.6
Dinv21823 Davidia involucrata HOM05D007902 ORTHO05D009839 2.2e-32 142.9 158 48.7
Cc02_g05590 Coffea canephora HOM05D007902 ORTHO05D009839 5.5e-28 128.3 148 49.3
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 1.6e-27 126.7 138 48.6
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 1.8e-26 123.2 137 51.8
Nitab4.5_0002713g0030 Nicotiana tabacum HOM05D007902 ORTHO05D009839 9.7e-25 117.5 114 55.3
CAN.G591.5 Capsicum annuum HOM05D007902 ORTHO05D009839 2.2e-24 116.3 157 45.2
Peaxi162Scf00464g00015 Petunia axillaris HOM05D007902 ORTHO05D009839 5.3e-23 111.7 136 49.3
Sopen06g015820 Solanum pennellii HOM05D007902 ORTHO05D009839 1.5e-22 110.2 120 50.8
Rhsim09G0183800 Rhododendron simsii HOM05D007902 ORTHO05D009839 3.4e-22 109.0 138 47.1
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 4.5e-22 108.6 110 50.0
Nitab4.5_0000263g0270 Nicotiana tabacum HOM05D007902 ORTHO05D009839 4.5e-22 108.6 114 51.8
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 1.3e-21 107.1 140 44.3
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 2.9e-21 105.9 140 42.9
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 2.9e-21 105.9 159 40.9
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 3.8e-21 105.5 157 42.0
unitig_52.g16781 Utricularia gibba HOM05D007902 ORTHO05D009839 6.5e-21 104.8 135 44.4
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 1.9e-20 103.2 138 44.2
SalBow5G2004 Salvia bowleyana HOM05D007902 ORTHO05D009839 3.2e-20 102.4 137 47.4
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 4.2e-20 102.1 171 40.9
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 4.7e-19 98.6 158 38.6
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 6.1e-19 98.2 153 39.9
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 2.3e-18 96.3 141 45.4
vmacro09979 Vaccinium macrocarpon HOM05D007902 ORTHO05D009839 6.7e-18 94.7 141 43.3
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 2.6e-17 92.8 112 46.4
Haze_17334 Corylus avellana HOM05D007902 ORTHO05D009839 5.7e-17 91.7 136 41.2
CiPaw.01G304600 Carya illinoinensis HOM05D007902 ORTHO05D009839 7.4e-17 91.3 120 40.8
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 1.3e-16 90.5 136 42.6
Nn2g10362 Nelumbo nucifera HOM05D007902 ORTHO05D009839 1.7e-16 90.1 119 45.4
MD01G1163300 Malus domestica HOM05D007902 ORTHO05D009839 4.8e-16 88.6 138 39.9
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 6.3e-16 88.2 127 39.4
Lsat_1_v5_gn_9_59200 Lactuca sativa HOM05D007902 ORTHO05D009839 8.2e-16 87.8 146 35.6
MD07G1231300 Malus domestica HOM05D007902 ORTHO05D009839 1.4e-15 87.0 138 38.4
FAN06G1561 Fragaria x ananassa HOM05D007902 ORTHO05D009839 1.8e-15 86.7 115 42.6
Lj1C1068T20 Lonicera japonica HOM05D007902 ORTHO05D009839 1.8e-15 86.7 86 51.2
FAN03G2841 Fragaria x ananassa HOM05D001122 ORTHO05D001877 4.1e-15 85.5 114 40.4
FvH4_7g25601 Fragaria vesca HOM05D007902 ORTHO05D009839 5.3e-15 85.1 115 41.7
CDE07G0481 Ceratophyllum demersum HOM05D007902 ORTHO05D009839 6.9e-15 84.7 121 41.3
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 1.5e-14 83.6 126 42.1
Ciclev10032767m.g Citrus clementina HOM05D007902 ORTHO05D009839 2.0e-14 83.2 164 37.8
RcHm_v2.0_Chr1g0371741 Rosa chinensis HOM05D007902 ORTHO05D009839 2.0e-14 83.2 158 33.5
Prupe.2G261300 Prunus persica HOM05D007902 ORTHO05D009839 2.6e-14 82.8 135 37.8
Lj1A965T42 Lonicera japonica HOM05D007902 ORTHO05D009839 3.4e-14 82.4 85 49.4
FAN01G1070 Fragaria x ananassa HOM05D001122 ORTHO05D001877 4.5e-14 82.0 115 39.1
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 8.5e-13 77.8 110 40.9
Aqoxy4G02352 Aquilegia oxysepala HOM05D007902 ORTHO05D009839 1.1e-12 77.4 125 44.0
ECA232G2170 Erigeron canadensis HOM05D001122 ORTHO05D001877 5.5e-12 75.1 101 38.6
arahy.Tifrunner.gnm1.ann1.C7E7HV Arachis hypogaea HOM05D007902 ORTHO05D009839 6.1e-11 71.6 122 34.4
Hund13474 Selenicereus undatus HOM05D007902 ORTHO05D009839 6.1e-11 71.6 169 30.2
arahy.Tifrunner.gnm1.ann1.0H4UJT Arachis hypogaea HOM05D007902 ORTHO05D009839 1.0e-10 70.9 122 34.4
PSO017G6410 Papaver somniferum HOM05D007902 ORTHO05D009839 1.0e-10 70.9 80 50.0
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 3.9e-10 68.9 122 36.9
AL6G15200 Arabidopsis lyrata HOM05D007902 ORTHO05D009839 6.7e-10 68.2 147 35.4
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 6.7e-10 68.2 156 34.6
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 6.7e-10 68.2 149 36.2
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 6.7e-10 68.2 144 32.6
PGR142G4074 Punica granatum HOM05D007902 ORTHO05D009839 8.8e-10 67.8 136 32.4
Ca_06023_v3 Cicer arietinum L. HOM05D007902 ORTHO05D009839 1.1e-09 67.4 111 36.9
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 1.5e-09 67.0 145 35.9
MBI03_g40382_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 1.5e-09 67.0 63 47.6
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 2.6e-09 66.2 144 34.7
PGSC0003DMG400029078 Solanum tuberosum HOM05D007902 ORTHO05D009839 3.3e-09 65.9 70 48.6
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 3.3e-09 65.9 140 31.4
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 4.4e-09 65.5 147 34.7
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 5.7e-09 65.1 127 36.2
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 1.3e-08 63.9 148 33.8
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 1.3e-08 63.9 126 34.9
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 2.2e-08 63.2 138 34.1
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 3.7e-08 62.4 145 34.5
Lalb_Chr17g0347071 Lupinus albus HOM05D007902 ORTHO05D009839 4.8e-08 62.0 91 40.7
CANSAT56G3130 Cannabis sativa HOM05D007902 ORTHO05D009839 1.1e-07 60.8 143 33.6
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 1.1e-07 60.8 50 58.0
PSO407G0011 Papaver somniferum HOM05D007902 ORTHO05D009839 1.8e-07 60.1 62 53.2
COL.COLO4_08937 Corchorus olitorius HOM05D007902 ORTHO05D009839 9.1e-07 57.8 49 53.1
LjContig00357g0001230 Lotus japonicus HOM05D007902 ORTHO05D009839 2.0e-06 56.6 113 31.9
Psat1g014880 Pisum sativum HOM05D007902 ORTHO05D009839 2.6e-06 56.2 105 32.4
Medtr0191s0020 Medicago truncatula HOM05D007902 ORTHO05D009839 3.5e-06 55.8 108 33.3


User provided reference genes

Program Settings