Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 9.6e-165 583.6 325 100.0
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 5.5e-112 408.3 325 72.0
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 2.7e-111 406.0 325 72.0
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 1.1e-107 394.0 324 71.3
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 1.1e-107 394.0 316 72.5
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 3.8e-105 385.6 318 71.1
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 3.3e-104 382.5 326 68.4
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 1.6e-103 380.2 324 70.1
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 1.8e-102 376.7 323 66.6
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 5.2e-102 375.2 320 68.4
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 1.4e-99 367.1 323 60.4
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 3.2e-99 365.9 316 68.7
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 3.2e-99 365.9 334 64.1
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 5.4e-99 365.2 318 67.6
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 1.2e-98 364.0 322 67.7
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 5.9e-98 361.7 323 64.7
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 1.3e-97 360.5 333 63.1
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 2.3e-97 359.8 320 66.9
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 8.6e-97 357.8 323 66.6
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 1.5e-96 357.1 325 64.0
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 1.5e-96 357.1 316 66.1
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 1.5e-96 357.1 325 65.8
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 1.9e-96 356.7 320 64.1
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 3.3e-96 355.9 323 66.3
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 7.3e-96 354.8 320 67.2
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 1.2e-95 354.0 323 65.6
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 1.6e-95 353.6 399 54.4
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 2.8e-95 352.8 342 62.9
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 3.6e-95 352.4 318 68.2
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 1.0e-94 350.9 324 65.1
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 1.0e-94 350.9 326 65.0
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 1.4e-94 350.5 321 58.9
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 1.8e-94 350.1 322 65.2
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.1e-94 349.4 324 63.0
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 3.1e-94 349.4 316 66.1
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 5.2e-94 348.6 319 63.9
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 6.8e-94 348.2 324 63.3
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 6.8e-94 348.2 320 64.7
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 8.9e-94 347.8 332 60.5
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 8.9e-94 347.8 332 60.8
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 8.9e-94 347.8 320 64.7
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 1.2e-93 347.4 325 64.0
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 1.2e-93 347.4 322 65.2
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 1.5e-93 347.1 325 65.2
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 2.0e-93 346.7 318 65.1
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 2.0e-93 346.7 323 62.2
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 2.0e-93 346.7 315 66.7
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 2.6e-93 346.3 323 61.0
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 3.4e-93 345.9 314 64.6
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 3.4e-93 345.9 325 64.0
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 3.4e-93 345.9 325 64.0
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 3.4e-93 345.9 337 60.8
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 9.8e-93 344.4 327 61.2
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 1.3e-92 344.0 323 63.8
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 1.7e-92 343.6 325 64.9
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 6.4e-92 341.7 320 64.1
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 8.3e-92 341.3 328 63.4
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 3.2e-91 339.3 322 56.8
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 7.0e-91 338.2 346 59.0
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 2.0e-90 336.7 331 62.5
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 2.0e-90 336.7 324 58.3
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 2.7e-90 336.3 324 56.5
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 3.5e-90 335.9 332 61.7
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 1.0e-89 334.3 314 57.6
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 2.3e-89 333.2 314 56.7
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 2.3e-89 333.2 314 56.7
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 3.0e-89 332.8 314 55.7
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 3.9e-89 332.4 323 55.1
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 6.6e-89 331.6 340 60.9
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 8.6e-89 331.3 322 55.0
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 8.6e-89 331.3 313 59.4
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 1.1e-88 330.9 323 63.2
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 1.1e-88 330.9 314 57.0
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 2.5e-88 329.7 319 63.6
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 9.5e-88 327.8 323 57.6
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 9.5e-88 327.8 323 57.6
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 8.1e-87 324.7 323 57.3
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 6.8e-86 321.6 322 59.0
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 8.9e-86 321.2 321 57.6
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 4.4e-85 318.9 317 55.5
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 5.4e-83 312.0 323 52.9
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 7.1e-83 311.6 280 64.3
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 1.0e-81 307.8 353 56.1
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 1.6e-79 300.4 190 78.4
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 1.6e-79 300.4 271 65.7
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 4.7e-79 298.9 323 57.9
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 2.6e-77 293.1 325 54.8
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 1.3e-76 290.8 272 65.1
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 7.8e-74 281.6 318 56.3
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 3.0e-73 279.6 323 52.3
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 5.1e-73 278.9 185 73.0
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 5.1e-73 278.9 185 73.0
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 6.6e-73 278.5 187 72.2
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 1.5e-72 277.3 188 72.3
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 5.6e-72 275.4 322 48.1
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.4e-70 270.8 273 52.4
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 1.4e-70 270.8 316 55.4
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 4.0e-70 269.2 314 53.5
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 2.9e-68 263.1 324 52.8
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 1.1e-67 261.2 334 53.6
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 7.1e-67 258.5 245 68.2
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 1.3e-60 237.7 219 65.8
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 6.4e-60 235.3 186 58.6
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 6.0e-58 228.8 325 48.3
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 1.5e-53 214.2 155 68.4
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.2e-50 204.5 215 51.2
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 4.3e-48 196.1 137 70.1
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 2.8e-47 193.4 141 68.1
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 4.8e-47 192.6 327 35.2
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 6.9e-46 188.7 309 41.7
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 1.3e-41 174.5 411 36.3
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 3.9e-33 146.4 167 62.3
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 1.0e-25 121.7 126 47.6
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 2.3e-25 120.6 339 29.8
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.1e-24 118.2 69 84.1
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 1.3e-23 114.8 141 48.2
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 1.9e-19 100.9 78 60.3
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 1.9e-19 100.9 200 34.0
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 1.2e-18 98.2 57 75.4
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 2.1e-18 97.4 81 60.5
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 8.2e-15 85.5 52 75.0
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 8.2e-15 85.5 161 35.4
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 2.4e-14 84.0 146 37.0
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 2.0e-13 80.9 76 57.9
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 1.7e-12 77.8 55 69.1
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 8.5e-12 75.5 51 68.6
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 1.1e-11 75.1 48 72.9
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 9.4e-11 72.0 48 77.1
Ah.07g199910 Amaranthus hybridus HOM05D006103 ORTHO05D007468 3.7e-07 60.1 51 58.8


User provided reference genes

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