Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 1.1e-67 260.0 145 100.0
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 3.6e-47 191.8 147 74.1
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 6.0e-18 94.7 142 50.0
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 2.3e-17 92.8 141 50.4
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 3.0e-17 92.4 152 43.4
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.5e-16 90.1 97 60.8
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 9.7e-16 87.4 157 43.9
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.3e-15 87.0 150 41.3
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 3.7e-15 85.5 78 64.1
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.8e-14 83.2 92 55.4
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 3.1e-14 82.4 97 55.7
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 4.1e-14 82.0 140 40.7
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 1.5e-13 80.1 95 53.7
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 3.4e-13 79.0 67 67.2
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.2e-12 76.3 92 55.4
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 3.8e-12 75.5 102 50.0
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 6.5e-12 74.7 83 55.4
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.5e-12 74.3 89 50.6
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 8.5e-12 74.3 92 52.2
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 1.4e-11 73.6 147 41.5
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.9e-11 73.2 98 49.0
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.9e-11 73.2 79 50.6
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.5e-11 72.8 99 49.5
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.5e-11 72.8 84 53.6
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 2.5e-11 72.8 80 55.0
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 3.2e-11 72.4 83 51.8
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.4e-11 70.9 83 54.2
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.2e-10 70.5 89 52.8
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.6e-10 70.1 90 51.1
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 1.6e-10 70.1 73 57.5
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.7e-10 69.3 95 48.4
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.7e-10 69.3 95 49.5
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.7e-10 69.3 95 49.5
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.7e-10 69.3 95 48.4
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 2.7e-10 69.3 91 50.5
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 3.6e-10 68.9 81 56.8
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 3.6e-10 68.9 81 56.8
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 3.6e-10 68.9 81 56.8
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 3.6e-10 68.9 95 48.4
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 3.6e-10 68.9 80 53.8
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 3.6e-10 68.9 95 44.2
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.4e-09 67.0 78 50.0
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.4e-09 67.0 77 53.2
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 1.8e-09 66.6 107 49.5
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.8e-09 66.6 81 51.9
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 2.3e-09 66.2 80 50.0
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 3.0e-09 65.9 97 51.5
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 3.9e-09 65.5 107 49.5
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 5.1e-09 65.1 81 53.1
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 6.7e-09 64.7 73 53.4
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 6.7e-09 64.7 83 48.2
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 8.8e-09 64.3 101 45.5
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.1e-08 63.9 96 40.6
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 1.5e-08 63.5 80 50.0
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.3e-08 62.4 95 45.3
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 3.3e-08 62.4 83 45.8
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 5.7e-08 61.6 129 37.2
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 9.7e-08 60.8 69 50.7
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.8e-07 59.3 88 43.2
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 2.8e-07 59.3 83 42.2
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 2.8e-07 59.3 85 42.4
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 3.7e-07 58.9 89 43.8
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 4.8e-07 58.5 89 46.1
Solyc11g066000.1 Solanum lycopersicum HOM05D030065 ORTHO05D005174 4.8e-07 58.5 87 44.8
PGSC0003DMG400000470 Solanum tuberosum HOM05D030065 ORTHO05D005174 6.3e-07 58.2 63 52.4
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 6.3e-07 58.2 96 44.8
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 8.2e-07 57.8 67 50.7
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.1e-06 57.4 102 38.2
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.1e-06 57.4 89 43.8
Sopen11g025730 Solanum pennellii HOM05D030065 ORTHO05D005174 1.1e-06 57.4 63 52.4
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.4e-06 57.0 102 41.2
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.8e-06 56.6 94 42.6
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 5.3e-06 55.1 93 40.9
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 5.3e-06 55.1 78 44.9
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.1e-06 54.3 77 40.3
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.1e-06 54.3 85 36.5
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 9.1e-06 54.3 85 36.5
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 9.1e-06 54.3 82 40.2


User provided reference genes

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