Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054069.1 Olea europaea HOM05D000033 ORTHO05D026352 6.5e-86 320.9 183 100.0
Oeu015458.1 Olea europaea HOM05D000033 ORTHO05D007915 3.6e-52 208.8 153 79.1
THA.LOC104808773 Tarenaya hassleriana HOM05D000033 ORTHO05D007915 1.7e-41 173.3 154 59.1
Oeu052115.1 Olea europaea HOM05D000033 ORTHO05D007915 6.4e-41 171.4 153 66.7
FAN15G2420 Fragaria x ananassa HOM05D000033 ORTHO05D007915 1.4e-40 170.2 150 59.3
RcHm_v2.0_Chr6g0285321 Rosa chinensis HOM05D000033 ORTHO05D007915 4.2e-40 168.7 150 58.7
Nitab4.5_0001056g0010 Nicotiana tabacum HOM05D000033 ORTHO05D007915 5.4e-40 168.3 153 64.7
FvH4_2g19550 Fragaria vesca HOM05D000033 ORTHO05D007915 1.2e-39 167.2 150 58.7
FAN24G3279 Fragaria x ananassa HOM05D000033 ORTHO05D007915 1.2e-39 167.2 150 58.7
FAN27G0417 Fragaria x ananassa HOM05D000033 ORTHO05D007915 1.2e-39 167.2 150 58.7
MELO3C020998.2 Cucumis melo HOM05D000033 ORTHO05D007915 2.7e-39 166.0 150 59.3
Nitab4.5_0001657g0020 Nicotiana tabacum HOM05D000033 ORTHO05D007915 2.7e-39 166.0 153 66.0
MSTRG.17540 Avicennia marina HOM05D000033 ORTHO05D007915 7.8e-39 164.5 153 57.5
Lalb_Chr03g0041951 Lupinus albus HOM05D000033 ORTHO05D007915 1.0e-38 164.1 153 56.9
Lalb_Chr19g0125471 Lupinus albus HOM05D000033 ORTHO05D007915 1.0e-38 164.1 152 55.3
MSTRG.18376 Avicennia marina HOM05D000033 ORTHO05D007915 1.3e-38 163.7 152 58.6
Dinv19227 Davidia involucrata HOM05D000033 ORTHO05D007915 3.0e-38 162.5 150 58.0
Sabra02G0191300 Salix brachista HOM05D000033 ORTHO05D007915 3.0e-38 162.5 152 57.2
Solyc09g061930.4 Solanum lycopersicum HOM05D000033 ORTHO05D007915 3.0e-38 162.5 156 62.8
Sopen09g025010 Solanum pennellii HOM05D000033 ORTHO05D007915 3.0e-38 162.5 156 62.8
CAN.G620.2 Capsicum annuum HOM05D000033 ORTHO05D007915 5.1e-38 161.8 141 68.1
SalBow6G5242 Salvia bowleyana HOM05D000033 ORTHO05D007915 8.7e-38 161.0 151 57.6
Sp3g22430 Schrenkiella parvula HOM05D000033 ORTHO05D007915 8.7e-38 161.0 153 64.1
Eucgr.H00812 Eucalyptus grandis HOM05D000033 ORTHO05D007915 1.1e-37 160.6 153 61.4
Manes.13G043700 Manihot esculenta HOM05D000033 ORTHO05D007915 1.1e-37 160.6 152 64.5
Potri.002G251700 Populus trichocarpa HOM05D000033 ORTHO05D007915 3.3e-37 159.1 152 56.6
CiPaw.03G152200 Carya illinoinensis HOM05D000033 ORTHO05D007915 4.3e-37 158.7 153 63.4
Gohir.A11G135700 Gossypium hirsutum HOM05D000033 ORTHO05D007915 5.6e-37 158.3 150 55.3
Gohir.D11G142000 Gossypium hirsutum HOM05D000033 ORTHO05D007915 5.6e-37 158.3 150 56.7
Lj1A82T75 Lonicera japonica HOM05D000033 ORTHO05D007915 7.3e-37 157.9 154 55.2
Gorai.007G152400 Gossypium raimondii HOM05D000033 ORTHO05D007915 1.3e-36 157.1 150 56.0
AL3G40280 Arabidopsis lyrata HOM05D000033 ORTHO05D007915 1.6e-36 156.8 153 63.4
Carub.0003s2507 Capsella rubella HOM05D000033 ORTHO05D007915 2.8e-36 156.0 153 62.7
Ciclev10019548m.g Citrus clementina HOM05D000033 ORTHO05D007915 2.8e-36 156.0 153 58.8
Actinidia37577 Actinidia chinensis HOM05D000033 ORTHO05D007915 6.2e-36 154.8 162 53.7
AT3G24660 Arabidopsis thaliana HOM05D000033 ORTHO05D007915 6.2e-36 154.8 153 62.1
CSS0035548 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D007915 8.1e-36 154.5 153 62.7
CSS0045408 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D007915 8.1e-36 154.5 153 62.7
Lj1g0012508 Lotus japonicus HOM05D000033 ORTHO05D007915 8.1e-36 154.5 153 56.2
ClCG09G009200 Citrullus lanatus HOM05D000033 ORTHO05D007915 1.4e-35 153.7 153 62.7
CAN.G133.7 Capsicum annuum HOM05D000033 ORTHO05D007915 1.8e-35 153.3 205 46.3
Cfa002539 Carpinus fangiana HOM05D000033 ORTHO05D007915 1.8e-35 153.3 150 55.3
TAR365G0646 Trochodendron aralioides HOM05D000029 ORTHO05D007915 1.8e-35 153.3 152 54.6
Atru.chr5.1874 Acer truncatum HOM05D000033 ORTHO05D007915 2.4e-35 152.9 182 54.9
Psat3g142800 Pisum sativum HOM05D000033 ORTHO05D007915 2.4e-35 152.9 150 54.0
Aa31LG9G4580 Aethionema arabicum HOM05D000033 ORTHO05D007915 3.1e-35 152.5 153 52.9
Haze_24767 Corylus avellana HOM05D000033 ORTHO05D007915 1.5e-34 150.2 150 53.3
Prupe.8G206900 Prunus persica HOM05D000033 ORTHO05D007915 1.5e-34 150.2 150 56.0
ECA248G3720 Erigeron canadensis HOM05D000033 ORTHO05D007915 2.0e-34 149.8 156 58.3
VMungo1383G2507 Vigna mungo HOM05D000033 ORTHO05D007915 3.4e-34 149.1 152 53.9
arahy.Tifrunner.gnm1.ann1.76XYX5 Arachis hypogaea HOM05D000033 ORTHO05D007915 4.5e-34 148.7 153 52.9
arahy.Tifrunner.gnm1.ann1.E7IC8N Arachis hypogaea HOM05D000033 ORTHO05D007915 7.6e-34 147.9 153 52.9
Cpa.g.sc8.184 Carica papaya HOM05D000033 ORTHO05D007915 9.9e-34 147.5 153 60.8
TPR.G23276 Trifolium pratense HOM05D000033 ORTHO05D007915 2.2e-33 146.4 149 53.0
Glyma.08G357200 Glycine max HOM05D000033 ORTHO05D007915 2.9e-33 146.0 151 54.3
CsaV3_7G025730 Cucumis sativus L. HOM05D000033 ORTHO05D007915 3.8e-33 145.6 150 61.3
MD05G1179600 Malus domestica HOM05D000033 ORTHO05D007915 3.8e-33 145.6 150 52.7
Hma1.2p1_2697F.1_g327050 Hydrangea macrophylla HOM05D000033 ORTHO05D007915 4.9e-33 145.2 153 58.2
Phvul.008G122400 Phaseolus vulgaris HOM05D000033 ORTHO05D007915 6.4e-33 144.8 151 53.0
Duzib138G0921 Durio zibethinus HOM05D000033 ORTHO05D007915 8.4e-33 144.4 150 54.7
Thhalv10002428m.g Eutrema salsugineum HOM05D000033 ORTHO05D007915 8.4e-33 144.4 150 60.0
Peaxi162Scf00052g01012 Petunia axillaris HOM05D000033 ORTHO05D007915 8.4e-33 144.4 150 60.0
PGSC0003DMG400015806 Solanum tuberosum HOM05D000033 ORTHO05D007915 8.4e-33 144.4 156 57.7
Ca_22683_v3 Cicer arietinum L. HOM05D000033 ORTHO05D007915 1.9e-32 143.3 151 53.6
DCAR_000538 Daucus carota HOM05D000033 ORTHO05D007915 2.4e-32 142.9 154 52.6
Medtr7g059225 Medicago truncatula HOM05D000033 ORTHO05D007915 2.4e-32 142.9 150 62.0
CANSAT11G1230 Cannabis sativa HOM05D000033 ORTHO05D007915 3.2e-32 142.5 151 57.0
MD10G1169200 Malus domestica HOM05D000033 ORTHO05D007915 4.2e-32 142.1 150 52.0
QL09p044460 Quercus lobata HOM05D000033 ORTHO05D007915 4.2e-32 142.1 150 52.7
PGR083G2898 Punica granatum HOM05D000033 ORTHO05D007915 5.4e-32 141.7 158 48.7
Glyma.18G175700 Glycine max HOM05D000033 ORTHO05D007915 7.1e-32 141.4 150 54.0
PSO478G5147 Papaver somniferum HOM05D000033 ORTHO05D007915 7.1e-32 141.4 154 50.6
Thecc.01G229700 Theobroma cacao HOM05D000033 ORTHO05D007915 7.1e-32 141.4 150 53.3
EL10Ac7g17801 Beta vulgaris HOM05D000033 ORTHO05D007915 2.1e-31 139.8 153 56.9
COL.COLO4_36859 Corchorus olitorius HOM05D000033 ORTHO05D007915 2.1e-31 139.8 150 52.0
Sc05g0002350 Simmondsia chinensis HOM05D000033 ORTHO05D007915 2.7e-31 139.4 182 51.6
BolC3t17708H Brassica oleracea HOM05D000033 ORTHO05D007915 3.5e-31 139.0 154 56.5
C03p54240 Brassica napus HOM05D000033 ORTHO05D007915 4.6e-31 138.7 184 50.5
Nn1g03131 Nelumbo nucifera HOM05D000033 ORTHO05D007915 4.6e-31 138.7 153 49.7
PSO017G4325 Papaver somniferum HOM05D000033 ORTHO05D007915 6.0e-31 138.3 154 49.4
Thhalv10024625m.g Eutrema salsugineum HOM05D000033 ORTHO05D007915 1.0e-30 137.5 153 50.3
BcaC01g03262 Brassica carinata HOM05D000033 ORTHO05D007915 1.3e-30 137.1 154 56.5
Rhsim13G0042700 Rhododendron simsii HOM05D000033 ORTHO05D007915 3.0e-30 136.0 153 51.0
SGA_v2.0_scaffold3G01587 Striga asiatica HOM05D000033 ORTHO05D007915 4.3e-29 132.1 157 47.8
AUR62008885 Chenopodium quinoa HOM05D000033 ORTHO05D007915 7.4e-29 131.3 157 51.6
Migut.N02254 Erythranthe guttata HOM05D000033 ORTHO05D007915 1.6e-28 130.2 153 47.7
CiPaw.04G107500 Carya illinoinensis HOM05D000033 ORTHO05D007915 2.8e-28 129.4 144 56.9
TWI59G1082 Tripterygium wilfordii HOM05D000033 ORTHO05D007915 3.7e-28 129.0 153 47.7
BcaB03g14570 Brassica carinata HOM05D000033 ORTHO05D007915 6.2e-28 128.3 142 59.2
A03p43870 Brassica napus HOM05D000033 ORTHO05D007915 5.3e-27 125.2 185 48.1
BraA03t13519Z Brassica rapa HOM05D000033 ORTHO05D007915 5.3e-27 125.2 185 48.1
Lsat_1_v5_gn_5_179560 Lactuca sativa HOM05D000033 ORTHO05D007915 1.2e-26 124.0 153 56.2
CARHR101030 Cardamine hirsuta HOM05D000033 ORTHO05D007915 2.6e-26 122.9 153 52.9
Nn3g19888 Nelumbo nucifera HOM05D000033 ORTHO05D007915 2.6e-26 122.9 153 53.6
Sed0026775 Sechium edule HOM05D000033 ORTHO05D007915 5.8e-26 121.7 150 47.3
CDE09G1269 Ceratophyllum demersum HOM05D000033 ORTHO05D007915 7.6e-26 121.3 158 43.7
CDE02G4635 Ceratophyllum demersum HOM05D000033 ORTHO05D007915 9.9e-26 120.9 158 42.4
Aqoxy5G00060 Aquilegia oxysepala HOM05D000033 ORTHO05D007915 3.8e-25 119.0 152 44.1
HanXRQChr04g0109121 Helianthus annuus HOM05D000033 ORTHO05D007915 4.9e-25 118.6 155 46.5
Actinidia30097 Actinidia chinensis HOM05D000033 ORTHO05D007915 6.4e-25 118.2 143 46.9
vmacro02739 Vaccinium macrocarpon HOM05D000033 ORTHO05D007915 1.4e-24 117.1 153 44.4
Duzib133G1315 Durio zibethinus HOM05D000033 ORTHO05D007915 2.1e-23 113.2 185 48.1
MBI07_g19555_MAGBIO Magnolia biondii HOM05D000033 ORTHO05D007915 2.1e-23 113.2 153 43.8
ATR0088G039 Amborella trichopoda HOM05D000033 ORTHO05D007915 3.0e-22 109.4 142 54.2
Hund05527 Selenicereus undatus HOM05D000033 ORTHO05D007915 3.9e-22 109.0 126 50.8
HPP92_022074 Vanilla planifolia HOM05D000033 ORTHO05D007915 4.3e-21 105.5 152 50.7
Sp7g10690 Schrenkiella parvula HOM05D000033 ORTHO05D007915 5.6e-21 105.1 149 41.6
Zm00001eb038680 Zea mays HOM05D000033 ORTHO05D007915 7.4e-21 104.8 157 38.9
HanXRQChr13g0409111 Helianthus annuus HOM05D000033 ORTHO05D007915 2.8e-20 102.8 155 47.7
AUR62031823 Chenopodium quinoa HOM05D000033 ORTHO05D007915 8.2e-20 101.3 143 47.6
Manes.12G042800 Manihot esculenta HOM05D000033 ORTHO05D007915 9.0e-19 97.8 145 48.3
TAR362G0216 Trochodendron aralioides HOM05D000033 ORTHO05D007915 1.2e-18 97.4 177 36.2
Actinidia03559 Actinidia chinensis HOM05D000130 ORTHO05D026352 4.5e-18 95.5 68 72.1
GSVIVG01028547001 Vitis vinifera HOM05D000033 ORTHO05D007915 2.2e-17 93.2 125 41.6
Actinidia14756 Actinidia chinensis HOM05D000033 ORTHO05D026352 1.0e-14 84.3 65 66.2
Actinidia09147 Actinidia chinensis HOM05D067973 ORTHO05D026352 9.0e-11 71.2 55 67.3
SEGI_33022 Sequoiadendron giganteum HOM05D000033 ORTHO05D007915 5.9e-10 68.6 152 40.1
Nitab4.5_0006523g0020 Nicotiana tabacum HOM05D000106 ORTHO05D002214 1.2e-07 60.8 108 37.0
Lalb_Chr04g0251421 Lupinus albus HOM05D000033 ORTHO05D001583 2.1e-07 60.1 154 40.9
Hma1.2p1_0111F.1_g053970 Hydrangea macrophylla HOM05D006154 ORTHO05D007965 3.9e-06 55.8 39 82.1
Nitab4.5_0007030g0010 Nicotiana tabacum HOM05D000106 ORTHO05D002214 3.9e-06 55.8 116 36.2


User provided reference genes

Program Settings