Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 8.7e-75 283.5 137 100.0
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 5.5e-29 131.3 143 55.2
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 2.7e-28 129.0 140 50.7
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 6.1e-28 127.9 141 52.5
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 2.3e-27 125.9 140 53.6
MSTRG.2398 Avicennia marina HOM05D007558 ORTHO05D009245 2.2e-22 109.4 141 48.2
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 5.2e-19 98.2 134 44.8
unitig_8.g3152 Utricularia gibba HOM05D007558 ORTHO05D009245 6.8e-19 97.8 136 47.1
unitig_22.g6434 Utricularia gibba HOM05D007558 ORTHO05D009245 8.8e-19 97.4 137 48.2
MSTRG.591 Avicennia marina HOM05D007558 ORTHO05D009245 1.2e-18 97.1 111 49.5
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 2.6e-18 95.9 138 39.9
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 2.2e-17 92.8 122 41.8
SalBow8G4409 Salvia bowleyana HOM05D007558 ORTHO05D009245 2.2e-17 92.8 145 40.7
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 8.3e-17 90.9 131 42.0
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 4.5e-15 85.1 132 43.9
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 1.0e-14 84.0 129 38.8
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 1.7e-14 83.2 126 39.7
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 2.2e-14 82.8 121 47.1
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 2.2e-14 82.8 152 37.5
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 3.2e-13 79.0 126 40.5
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 3.2e-13 79.0 110 42.7
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 1.6e-12 76.6 127 40.2
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 2.1e-12 76.3 126 38.9
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 3.6e-12 75.5 119 40.3
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 6.1e-12 74.7 121 42.1
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 8.0e-12 74.3 116 43.1
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 1.0e-11 73.9 101 44.6
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 1.4e-11 73.6 124 39.5
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.8e-11 73.2 121 42.1
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.8e-11 73.2 117 41.0
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 1.8e-11 73.2 110 39.1
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 3.0e-11 72.4 127 38.6
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 4.0e-11 72.0 122 41.8
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 5.2e-11 71.6 137 35.0
AL1G37290 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 5.2e-11 71.6 127 38.6
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 5.2e-11 71.6 142 36.6
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 6.8e-11 71.2 117 40.2
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 8.8e-11 70.9 134 40.3
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 8.8e-11 70.9 117 41.9
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 1.2e-10 70.5 107 40.2
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 1.5e-10 70.1 122 41.0
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 1.5e-10 70.1 124 35.5
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 1.5e-10 70.1 114 42.1
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 2.0e-10 69.7 117 43.6
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 2.0e-10 69.7 124 37.9
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.6e-10 69.3 127 36.2
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.6e-10 69.3 127 36.2
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 3.4e-10 68.9 120 40.8
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 4.4e-10 68.6 114 36.8
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 9.8e-10 67.4 118 38.1
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 9.8e-10 67.4 118 39.8
Lalb_Chr16g0382221 Lupinus albus HOM05D007558 ORTHO05D009245 1.3e-09 67.0 119 41.2
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 1.7e-09 66.6 122 35.2
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 1.7e-09 66.6 135 33.3
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 1.7e-09 66.6 71 46.5
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 2.2e-09 66.2 145 33.8
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 2.8e-09 65.9 128 37.5
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 2.8e-09 65.9 109 41.3
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 3.7e-09 65.5 110 40.0
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 3.7e-09 65.5 118 38.1
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 6.3e-09 64.7 119 37.8
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 6.3e-09 64.7 131 33.6
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 6.3e-09 64.7 147 34.7
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 8.3e-09 64.3 127 35.4
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 1.1e-08 63.9 123 35.0
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 1.1e-08 63.9 118 37.3
SGA_v2.0_scaffold165G38235 Striga asiatica HOM05D007558 ORTHO05D009245 1.1e-08 63.9 102 46.1
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 1.4e-08 63.5 118 33.9
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 1.8e-08 63.2 107 38.3
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 1.8e-08 63.2 123 35.8
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 2.4e-08 62.8 73 45.2
unitig_8.g3942 Utricularia gibba HOM05D007558 ORTHO05D009245 2.4e-08 62.8 95 38.9
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 3.1e-08 62.4 133 35.3
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 5.4e-08 61.6 125 34.4
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 7.0e-08 61.2 105 40.0
Nitab4.5_0005678g0020 Nicotiana tabacum HOM05D020724 ORTHO05D025910 7.0e-08 61.2 153 32.0
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 9.1e-08 60.8 106 35.8
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 9.1e-08 60.8 127 35.4
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 1.6e-07 60.1 118 36.4
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 1.6e-07 60.1 118 36.4
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 1.6e-07 60.1 129 36.4
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.6e-07 60.1 128 32.8
PGSC0003DMG400027920 Solanum tuberosum HOM05D007558 ORTHO05D009245 1.6e-07 60.1 129 35.7
Nitab4.5_0000203g0180 Nicotiana tabacum HOM05D020724 ORTHO05D025910 2.0e-07 59.7 154 31.2
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 2.7e-07 59.3 125 32.8
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.7e-07 59.3 110 35.5
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 2.7e-07 59.3 118 33.9
Eucgr.B03316 Eucalyptus grandis HOM05D007558 ORTHO05D009245 4.5e-07 58.5 135 34.1
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 4.5e-07 58.5 125 33.6
BolC2t08819H Brassica oleracea HOM05D008527 ORTHO05D010701 5.9e-07 58.2 118 36.4
A09p41140 Brassica napus HOM05D008527 ORTHO05D010701 1.0e-06 57.4 119 35.3
BraA09t39607Z Brassica rapa HOM05D008527 ORTHO05D010701 1.0e-06 57.4 119 35.3
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 1.0e-06 57.4 111 34.2
ATR0730G210 Amborella trichopoda HOM05D022024 ORTHO05D009245 1.3e-06 57.0 64 40.6
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 1.3e-06 57.0 118 35.6
AL2G29840 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 1.7e-06 56.6 126 31.7
Solyc04g026250.1 Solanum lycopersicum HOM05D007558 ORTHO05D009245 1.7e-06 56.6 125 36.0
VMungo0251G2708 Vigna mungo HOM05D007558 ORTHO05D009245 2.3e-06 56.2 109 37.6
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 5.0e-06 55.1 91 37.4
Sopen04g014760 Solanum pennellii HOM05D007558 ORTHO05D009245 5.0e-06 55.1 125 35.2
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 6.6e-06 54.7 145 31.0
BcaC03g15190 Brassica carinata HOM05D008527 ORTHO05D010701 6.6e-06 54.7 101 37.6
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 6.6e-06 54.7 96 34.4
BolC5t30985H Brassica oleracea HOM05D008527 ORTHO05D010701 8.6e-06 54.3 123 32.5
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 8.6e-06 54.3 127 34.6


User provided reference genes

Program Settings