Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 8.2e-34 146.4 68 100.0
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 1.1e-14 82.8 64 67.2
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 3.2e-14 81.3 65 61.5
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 9.4e-14 79.7 65 58.5
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 2.7e-13 78.2 65 58.5
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 3.6e-13 77.8 65 58.5
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 8.0e-13 76.6 65 58.5
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 8.0e-13 76.6 67 58.2
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 1.0e-12 76.3 65 58.5
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 1.4e-12 75.9 65 58.5
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.8e-12 75.5 65 55.4
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.8e-12 75.5 65 55.4
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 1.8e-12 75.5 65 55.4
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 1.8e-12 75.5 65 55.4
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 2.3e-12 75.1 65 55.4
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 2.3e-12 75.1 64 56.2
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 3.0e-12 74.7 65 58.5
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 4.0e-12 74.3 64 54.7
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 4.0e-12 74.3 67 56.7
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 4.0e-12 74.3 67 55.2
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 4.0e-12 74.3 67 56.7
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 4.0e-12 74.3 65 56.9
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 4.0e-12 74.3 64 56.2
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 5.2e-12 73.9 65 55.4
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 6.8e-12 73.6 63 55.6
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 6.8e-12 73.6 63 55.6
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 6.8e-12 73.6 65 53.8
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 6.8e-12 73.6 64 56.2
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 6.8e-12 73.6 64 56.2
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 8.8e-12 73.2 67 56.7
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 8.8e-12 73.2 67 56.7
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 8.8e-12 73.2 63 55.6
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 8.8e-12 73.2 64 56.2
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 8.8e-12 73.2 65 53.8
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 8.8e-12 73.2 64 54.7
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 1.2e-11 72.8 64 56.2
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 1.2e-11 72.8 64 54.7
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 1.2e-11 72.8 65 53.8
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 1.2e-11 72.8 59 62.7
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 1.5e-11 72.4 60 56.7
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 1.5e-11 72.4 64 56.2
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 2.0e-11 72.0 64 54.7
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 2.6e-11 71.6 67 53.7
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 2.6e-11 71.6 64 54.7
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 3.4e-11 71.2 64 53.1
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 3.4e-11 71.2 68 52.9
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 4.4e-11 70.9 64 54.7
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 4.4e-11 70.9 64 54.7
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 4.4e-11 70.9 65 55.4
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 4.4e-11 70.9 65 55.4
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 4.4e-11 70.9 64 54.7
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 5.7e-11 70.5 65 52.3
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 5.7e-11 70.5 64 53.1
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 9.8e-11 69.7 65 53.8
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 9.8e-11 69.7 65 53.8
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 9.8e-11 69.7 65 53.8
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 9.8e-11 69.7 65 53.8
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 1.3e-10 69.3 64 53.1
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 1.3e-10 69.3 64 53.1
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 1.3e-10 69.3 64 53.1
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 1.3e-10 69.3 64 53.1
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 1.7e-10 68.9 63 55.6
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 1.7e-10 68.9 63 55.6
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 1.7e-10 68.9 64 51.6
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 1.7e-10 68.9 65 53.8
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 2.2e-10 68.6 63 55.6
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 2.8e-10 68.2 64 51.6
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 2.8e-10 68.2 65 53.8
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 2.8e-10 68.2 59 55.9
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 2.8e-10 68.2 61 54.1
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 3.7e-10 67.8 64 51.6
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.7e-10 67.8 65 52.3
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 3.7e-10 67.8 61 54.1
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 3.7e-10 67.8 61 54.1
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 4.8e-10 67.4 64 51.6
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 6.3e-10 67.0 59 57.6
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 8.3e-10 66.6 65 52.3
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 3.1e-09 64.7 54 59.3
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 9.1e-09 63.2 62 48.4
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 1.2e-08 62.8 60 48.3
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 1.2e-08 62.8 55 56.4
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 1.6e-08 62.4 64 48.4
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 2.7e-08 61.6 58 50.0
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 3.5e-08 61.2 54 55.6
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 5.9e-08 60.5 59 52.5
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 2.3e-07 58.5 55 50.9
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 5.0e-07 57.4 51 56.9
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 6.6e-07 57.0 51 56.9
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 8.6e-07 56.6 51 52.9
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 3.3e-06 54.7 47 59.6
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 3.3e-06 54.7 47 59.6


User provided reference genes

Program Settings