Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053996.1 Olea europaea HOM05D005099 ORTHO05D006087 1.4e-80 303.1 181 100.0
Oeu006417.1 Olea europaea HOM05D005099 ORTHO05D006087 7.0e-64 247.7 181 70.7
COL.COLO4_13826 Corchorus olitorius HOM05D005099 ORTHO05D006087 6.3e-49 198.0 193 61.1
Dinv44353 Davidia involucrata HOM05D005099 ORTHO05D006087 1.1e-48 197.2 191 61.3
Hma1.2p1_0804F.1_g221070 Hydrangea macrophylla HOM05D005099 ORTHO05D006087 2.4e-48 196.1 180 62.2
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 1.2e-47 193.7 186 60.8
Actinidia14282 Actinidia chinensis HOM05D005099 ORTHO05D006087 2.0e-47 193.0 177 60.5
Ciclev10006010m.g Citrus clementina HOM05D005099 ORTHO05D006087 2.0e-47 193.0 184 59.2
Thecc.04G288600 Theobroma cacao HOM05D005099 ORTHO05D006087 4.5e-47 191.8 192 58.9
CSS0011820 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 1.0e-46 190.7 176 59.7
Duzib151G0929 Durio zibethinus HOM05D005099 ORTHO05D006087 2.9e-46 189.1 194 56.7
Haze_01169 Corylus avellana HOM05D005099 ORTHO05D006087 6.6e-46 188.0 184 57.6
Rhsim02G0007200 Rhododendron simsii HOM05D005099 ORTHO05D006087 8.6e-46 187.6 176 59.1
FAN07G0877 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.9e-45 186.4 187 70.1
PGSC0003DMG400011309 Solanum tuberosum HOM05D005099 ORTHO05D006087 3.3e-45 185.7 179 67.6
ClCG06G004980 Citrullus lanatus HOM05D005099 ORTHO05D006087 4.2e-45 185.3 181 63.5
RcHm_v2.0_Chr4g0423321 Rosa chinensis HOM05D005099 ORTHO05D006087 5.5e-45 184.9 190 67.4
Cc03_g01550 Coffea canephora HOM05D005099 ORTHO05D006087 9.5e-45 184.1 185 64.9
CiPaw.01G145600 Carya illinoinensis HOM05D005099 ORTHO05D006087 1.6e-44 183.3 186 56.5
MELO3C021313.2 Cucumis melo HOM05D005099 ORTHO05D006087 1.6e-44 183.3 183 62.3
FvH4_4g18620 Fragaria vesca HOM05D005099 ORTHO05D006087 1.6e-44 183.3 186 65.6
FAN12G1484 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.6e-44 183.3 186 65.6
FAN12G1671 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.6e-44 183.3 186 65.6
MD16G1164800 Malus domestica HOM05D005099 ORTHO05D006087 2.1e-44 183.0 189 64.0
Nitab4.5_0000695g0110 Nicotiana tabacum HOM05D005099 ORTHO05D006087 2.8e-44 182.6 191 64.4
CAN.G14.36 Capsicum annuum HOM05D005099 ORTHO05D006087 3.6e-44 182.2 193 57.0
Sopen01g028090 Solanum pennellii HOM05D005099 ORTHO05D006087 3.6e-44 182.2 186 65.1
FAN17G2615 Fragaria x ananassa HOM05D005099 ORTHO05D006087 4.7e-44 181.8 181 69.1
Solyc01g066440.3 Solanum lycopersicum HOM05D005099 ORTHO05D006087 6.1e-44 181.4 186 66.7
Atru.chr4.2896 Acer truncatum HOM05D005099 ORTHO05D006087 8.0e-44 181.0 193 61.1
Cfa015424 Carpinus fangiana HOM05D005099 ORTHO05D006087 1.4e-43 180.3 186 57.0
CsaV3_6G023860 Cucumis sativus L. HOM05D005099 ORTHO05D006087 2.3e-43 179.5 186 58.6
Nitab4.5_0003767g0020 Nicotiana tabacum HOM05D005099 ORTHO05D006087 2.3e-43 179.5 191 63.9
Prupe.1G124100 Prunus persica HOM05D005099 ORTHO05D006087 5.2e-43 178.3 185 68.1
Nn3g21536 Nelumbo nucifera HOM05D005099 ORTHO05D006087 8.9e-43 177.6 184 59.8
THA.LOC104827334 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 8.9e-43 177.6 189 56.1
TAR365G0602 Trochodendron aralioides HOM05D005099 ORTHO05D006087 8.9e-43 177.6 191 60.7
Manes.15G010800 Manihot esculenta HOM05D005099 ORTHO05D006087 1.5e-42 176.8 177 56.5
CANSAT78G2455 Cannabis sativa HOM05D005099 ORTHO05D006087 4.4e-42 175.3 197 53.3
vmacro15214 Vaccinium macrocarpon HOM05D005099 ORTHO05D006087 5.7e-42 174.9 160 61.9
Glyma.09G042500 Glycine max HOM05D005099 ORTHO05D006087 9.8e-42 174.1 187 54.5
QL06p010333 Quercus lobata HOM05D005099 ORTHO05D006087 9.8e-42 174.1 198 57.6
VMungo1309G2116 Vigna mungo HOM05D005099 ORTHO05D006087 1.7e-41 173.3 185 54.1
Nn4g25764 Nelumbo nucifera HOM05D005099 ORTHO05D006087 2.8e-41 172.6 178 60.1
Peaxi162Scf00065g00138 Petunia axillaris HOM05D005099 ORTHO05D006087 4.9e-41 171.8 195 52.8
Medtr2g435810 Medicago truncatula HOM05D005099 ORTHO05D006087 6.3e-41 171.4 188 54.3
Medtr2g436150 Medicago truncatula HOM05D005099 ORTHO05D006087 6.3e-41 171.4 188 54.3
TWI73G1062 Tripterygium wilfordii HOM05D005099 ORTHO05D006087 6.3e-41 171.4 197 56.3
Potri.008G219500 Populus trichocarpa HOM05D005099 ORTHO05D006087 1.4e-40 170.2 188 54.3
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 2.4e-40 169.5 191 54.5
Dinv29728 Davidia involucrata HOM05D005099 ORTHO05D006087 3.1e-40 169.1 177 54.8
Phvul.009G250300 Phaseolus vulgaris HOM05D005099 ORTHO05D006087 4.1e-40 168.7 184 53.3
Glyma.15G150400 Glycine max HOM05D005099 ORTHO05D006087 7.0e-40 167.9 187 52.9
MD13G1165200 Malus domestica HOM05D005099 ORTHO05D006087 9.2e-40 167.5 193 64.2
Sed0019517 Sechium edule HOM05D005099 ORTHO05D006087 1.2e-39 167.2 179 53.1
CiPaw.02G080200 Carya illinoinensis HOM05D005099 ORTHO05D006087 2.0e-39 166.4 190 58.4
Psat1g155760 Pisum sativum HOM05D005099 ORTHO05D006087 3.5e-39 165.6 196 59.2
Aqoxy2G02900 Aquilegia oxysepala HOM05D005099 ORTHO05D006087 5.9e-39 164.9 183 62.8
Lj6g0002623 Lotus japonicus HOM05D005099 ORTHO05D006087 2.9e-38 162.5 185 60.0
Oeu033813.1 Olea europaea HOM05D005099 ORTHO05D006087 2.9e-38 162.5 186 53.8
Manes.03G198300 Manihot esculenta HOM05D005099 ORTHO05D006087 6.6e-38 161.4 180 52.2
TAR362G0212 Trochodendron aralioides HOM05D005099 ORTHO05D006087 1.5e-37 160.2 185 53.0
EL10Ac3g06640 Beta vulgaris HOM05D005099 ORTHO05D006087 3.3e-37 159.1 181 56.4
AUR62018071 Chenopodium quinoa HOM05D005099 ORTHO05D006087 5.6e-37 158.3 178 54.5
SalBow2G2334 Salvia bowleyana HOM05D005099 ORTHO05D006087 5.6e-37 158.3 176 54.0
Lalb_Chr20g0117371 Lupinus albus HOM05D005099 ORTHO05D006087 7.3e-37 157.9 185 62.2
PGR004G0666 Punica granatum HOM05D005099 ORTHO05D006087 1.2e-36 157.1 193 53.9
Ah.13g074810 Amaranthus hybridus HOM05D005099 ORTHO05D006087 1.6e-36 156.8 176 53.4
MSTRG.3894 Avicennia marina HOM05D005099 ORTHO05D006087 2.1e-36 156.4 181 52.5
CSS0049831 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 2.1e-36 156.4 187 51.3
AUR62015274 Chenopodium quinoa HOM05D005099 ORTHO05D006087 3.6e-36 155.6 180 53.3
Potri.010G010600 Populus trichocarpa HOM05D005099 ORTHO05D006087 4.7e-36 155.2 191 51.8
CARHR081450 Cardamine hirsuta HOM05D005099 ORTHO05D006087 8.0e-36 154.5 182 47.3
Gohir.A09G237600 Gossypium hirsutum HOM05D005099 ORTHO05D006087 1.0e-35 154.1 208 55.3
Sp3g05800 Schrenkiella parvula HOM05D005099 ORTHO05D006087 2.3e-35 152.9 187 52.9
Hund24882 Selenicereus undatus HOM05D005099 ORTHO05D006087 3.1e-35 152.5 187 52.9
HanXRQChr17g0536041 Helianthus annuus HOM05D005099 ORTHO05D006087 8.9e-35 151.0 187 48.1
BcaC09g47923 Brassica carinata HOM05D005099 ORTHO05D006087 1.2e-34 150.6 189 53.4
BolC1t05583H Brassica oleracea HOM05D005099 ORTHO05D006087 1.2e-34 150.6 189 53.4
Sc13g0003250 Simmondsia chinensis HOM05D005099 ORTHO05D006087 4.4e-34 148.7 183 57.4
Gorai.006G261200 Gossypium raimondii HOM05D005099 ORTHO05D006087 5.8e-34 148.3 209 60.8
AL3G17960 Arabidopsis lyrata HOM05D005099 ORTHO05D006087 1.3e-33 147.1 189 47.6
AT3G06840 Arabidopsis thaliana HOM05D005099 ORTHO05D006087 3.7e-33 145.6 189 47.6
Lsat_1_v5_gn_3_21720 Lactuca sativa HOM05D005099 ORTHO05D006087 4.9e-33 145.2 190 62.6
SGA_v2.0_scaffold67G22601 Striga asiatica HOM05D005099 ORTHO05D006087 4.9e-33 145.2 177 52.5
arahy.Tifrunner.gnm1.ann1.2UKM1V Arachis hypogaea HOM05D005099 ORTHO05D006087 6.4e-33 144.8 180 48.9
Sabra10G0006200 Salix brachista HOM05D005099 ORTHO05D006087 2.4e-32 142.9 190 47.9
arahy.Tifrunner.gnm1.ann1.2F59RJ Arachis hypogaea HOM05D005099 ORTHO05D006087 3.2e-32 142.5 180 48.3
Gohir.D09G238500 Gossypium hirsutum HOM05D005099 ORTHO05D006087 3.2e-32 142.5 188 54.3
THA.LOC104818909 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 3.2e-32 142.5 210 51.4
Eucgr.H03959 Eucalyptus grandis HOM05D005099 ORTHO05D006087 9.2e-32 141.0 205 51.7
BNapus_Darmor_BZH_scaffold_117p00120 Brassica napus HOM05D005099 ORTHO05D006087 2.0e-31 139.8 190 51.6
BraA01t04411Z Brassica rapa HOM05D005099 ORTHO05D006087 2.0e-31 139.8 190 51.6
Thhalv10021591m.g Eutrema salsugineum HOM05D005099 ORTHO05D006087 6.0e-31 138.3 190 50.5
PSO407G0003 Papaver somniferum HOM05D005099 ORTHO05D006087 6.0e-31 138.3 198 49.0
Sp2g19520 Schrenkiella parvula HOM05D005099 ORTHO05D006087 3.9e-30 135.6 194 46.4
Aa31LG5G17420 Aethionema arabicum HOM05D005099 ORTHO05D006087 5.0e-30 135.2 185 45.4
Gohir.D02G055600 Gossypium hirsutum HOM05D005099 ORTHO05D006087 8.6e-30 134.4 183 47.0
Gorai.005G061600 Gossypium raimondii HOM05D005099 ORTHO05D006087 8.6e-30 134.4 183 47.0
Thhalv10004959m.g Eutrema salsugineum HOM05D005099 ORTHO05D006087 1.9e-29 133.3 207 47.3
Migut.G00130 Erythranthe guttata HOM05D005099 ORTHO05D006087 3.3e-29 132.5 175 51.4
Gohir.A02G050700 Gossypium hirsutum HOM05D005099 ORTHO05D006087 3.3e-29 132.5 183 46.4
Carub.0003s0637 Capsella rubella HOM05D005099 ORTHO05D006087 1.2e-28 130.6 186 45.2
MBI18_g04556_MAGBIO Magnolia biondii HOM05D005099 ORTHO05D006087 2.8e-28 129.4 182 44.5
PSO170G0513 Papaver somniferum HOM05D005099 ORTHO05D006087 8.0e-28 127.9 201 50.7
arahy.Tifrunner.gnm1.ann1.H54SCY Arachis hypogaea HOM05D005099 ORTHO05D006087 1.1e-27 127.5 183 45.9
arahy.Tifrunner.gnm1.ann1.L8YWMY Arachis hypogaea HOM05D005099 ORTHO05D006087 5.2e-27 125.2 183 45.4
Sed0015120 Sechium edule HOM05D005099 ORTHO05D006087 1.2e-26 124.0 178 43.3
BraA06t26768Z Brassica rapa HOM05D005099 ORTHO05D006087 4.4e-26 122.1 200 45.0
DCAR_002480 Daucus carota HOM05D005099 ORTHO05D006087 5.8e-26 121.7 186 46.2
BcaB07g34138 Brassica carinata HOM05D005099 ORTHO05D006087 2.4e-24 116.3 178 46.1
BcaNung02585 Brassica carinata HOM05D005099 ORTHO05D006087 2.4e-24 116.3 220 41.8
BolC7t44497H Brassica oleracea HOM05D005099 ORTHO05D006087 2.4e-24 116.3 220 41.8
CARHR182490 Cardamine hirsuta HOM05D005099 ORTHO05D006087 3.2e-24 115.9 195 41.0
A02p37910 Brassica napus HOM05D005099 ORTHO05D006087 4.1e-24 115.5 194 45.4
BraA02t08775Z Brassica rapa HOM05D005099 ORTHO05D006087 1.2e-23 114.0 196 44.9
BcaC06g30711 Brassica carinata HOM05D005099 ORTHO05D006087 2.7e-23 112.8 225 40.9
AT5G49170 Arabidopsis thaliana HOM05D005099 ORTHO05D006087 3.5e-23 112.5 200 40.5
ECA246G4673 Erigeron canadensis HOM05D005099 ORTHO05D006087 3.5e-23 112.5 194 43.3
Carub.0008s0899 Capsella rubella HOM05D005099 ORTHO05D006087 4.6e-23 112.1 203 48.3
SHI00249 Sapria himalayana HOM05D005099 ORTHO05D006087 4.6e-23 112.1 186 40.9
BcaC03g17704 Brassica carinata HOM05D005099 ORTHO05D006087 1.7e-22 110.2 194 43.8
C02p57110 Brassica napus HOM05D005099 ORTHO05D006087 1.7e-22 110.2 194 43.8
BolC2t11783H Brassica oleracea HOM05D005099 ORTHO05D006087 1.7e-22 110.2 194 43.8
A06p38540 Brassica napus HOM05D005099 ORTHO05D006087 2.3e-22 109.8 223 40.4
C07p39730 Brassica napus HOM05D005099 ORTHO05D006087 3.9e-22 109.0 210 40.0
AL8G22700 Arabidopsis lyrata HOM05D005099 ORTHO05D006087 6.6e-22 108.2 199 39.7
HanXRQChr06g0173741 Helianthus annuus HOM05D005099 ORTHO05D006087 1.5e-21 107.1 179 41.9
Nitab4.5_0011001g0010 Nicotiana tabacum HOM05D005099 ORTHO05D006087 1.2e-20 104.0 182 38.5
GSVIVG01035110001 Vitis vinifera HOM05D005099 ORTHO05D006087 3.6e-20 102.4 75 73.3
MD13G1165100 Malus domestica HOM05D005099 ORTHO05D006087 6.2e-20 101.7 154 59.1
DCAR_023299 Daucus carota HOM05D005099 ORTHO05D006087 1.4e-19 100.5 180 41.7
Cpa.g.sc50.167 Carica papaya HOM05D005099 ORTHO05D006087 1.2e-18 97.4 122 50.0
Lj6P680T81 Lonicera japonica HOM05D005099 ORTHO05D006087 2.2e-17 93.2 60 71.7
ATR0693G064 Amborella trichopoda HOM05D005099 ORTHO05D006087 3.7e-17 92.4 176 38.6
Sc19g0005440 Simmondsia chinensis HOM05D005099 ORTHO05D006087 2.4e-16 89.7 177 38.4
Sopen05g032840 Solanum pennellii HOM05D005099 ORTHO05D006087 3.2e-16 89.4 181 37.6
Lalb_Chr15g0086051 Lupinus albus HOM05D005099 ORTHO05D006087 4.1e-16 89.0 94 54.3
HPP92_011860 Vanilla planifolia HOM05D005099 ORTHO05D006087 7.1e-16 88.2 169 37.3
Nn7g36563 Nelumbo nucifera HOM05D005099 ORTHO05D006087 2.7e-15 86.3 59 71.2
BcaC06g30713 Brassica carinata HOM05D005099 ORTHO05D006087 3.0e-14 82.8 63 68.3
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.0e-14 82.8 151 51.7
Nitab4.5_0001097g0130 Nicotiana tabacum HOM05D005099 ORTHO05D006087 7.3e-13 78.2 158 34.8
Oeu035687.1 Olea europaea HOM05D005099 ORTHO05D006087 1.6e-12 77.0 186 33.9
Actinidia00002 Actinidia chinensis HOM05D005099 ORTHO05D006087 3.4e-10 69.3 40 75.0
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 3.0e-06 56.2 176 27.8
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 6.6e-06 55.1 176 29.0
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 6.6e-06 55.1 176 27.8


User provided reference genes

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