Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 0.0e+00 1463.7 736 100.0
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 0.0e+00 1091.6 778 70.8
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 0.0e+00 1083.6 778 70.3
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 0.0e+00 1083.2 777 69.8
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 0.0e+00 1082.8 778 70.3
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 2.5e-301 1038.5 773 67.0
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 1.6e-300 1035.8 776 66.9
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 1.6e-300 1035.8 776 66.9
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 5.3e-296 1020.8 777 66.9
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 1.3e-294 1016.1 774 66.7
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 2.9e-294 1015.0 774 66.8
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 3.8e-294 1014.6 777 66.4
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 1.6e-292 1009.2 775 65.8
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 1.6e-292 1009.2 777 65.4
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 8.0e-292 1006.9 773 66.4
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 2.0e-290 1002.3 777 65.1
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 5.7e-290 1000.7 775 65.0
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 9.8e-290 1000.0 774 66.7
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 1.7e-289 999.2 778 65.3
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 2.2e-289 998.8 778 65.0
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 6.3e-289 997.3 775 65.7
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 2.4e-288 995.3 775 64.9
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 9.1e-288 993.4 776 65.6
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 1.2e-287 993.0 795 64.2
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 2.7e-287 991.9 785 64.3
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 1.0e-286 989.9 774 65.2
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 1.0e-286 989.9 868 60.3
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 2.7e-284 981.9 780 63.7
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.8e-283 979.2 774 65.1
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 5.2e-283 977.6 768 65.2
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 1.5e-282 976.1 777 63.3
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 4.4e-282 974.5 777 63.1
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 9.8e-282 973.4 770 64.5
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 9.8e-282 973.4 778 63.5
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 1.3e-281 973.0 775 65.3
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 1.7e-281 972.6 778 63.1
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 2.8e-281 971.8 775 63.0
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 6.3e-281 970.7 773 63.6
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 6.3e-281 970.7 834 62.4
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.1e-280 969.9 782 63.2
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 3.5e-279 964.9 773 64.7
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 7.7e-279 963.8 780 62.4
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 1.0e-278 963.4 773 65.6
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 2.3e-278 962.2 789 61.7
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 3.8e-278 961.4 778 62.6
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 1.9e-277 959.1 782 63.8
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 1.6e-276 956.1 778 62.5
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 2.8e-276 955.3 775 62.3
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 4.4e-274 948.0 777 61.5
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 1.7e-273 946.0 769 62.0
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 8.3e-273 943.7 803 60.6
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 2.4e-272 942.2 778 62.6
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 2.7e-271 938.7 747 64.0
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 5.6e-269 931.0 748 63.6
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 2.1e-268 929.1 774 62.5
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 4.7e-268 927.9 780 60.9
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 1.0e-267 926.8 775 62.5
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 6.8e-267 924.1 880 56.4
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 3.4e-266 921.8 771 60.7
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 5.4e-264 914.4 778 60.4
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 9.2e-264 913.7 777 60.6
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 1.3e-262 909.8 778 59.4
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 1.7e-262 909.4 783 59.6
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 1.7e-262 909.4 774 59.8
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 1.7e-262 909.4 778 59.6
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 3.0e-262 908.7 777 60.6
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 1.5e-261 906.4 778 59.1
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 1.9e-261 906.0 778 59.5
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 2.5e-261 905.6 771 59.5
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 9.5e-261 903.7 778 59.5
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 1.6e-260 902.9 777 59.8
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 2.8e-260 902.1 787 58.8
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 8.9e-259 897.1 780 59.0
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 8.9e-259 897.1 771 58.8
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 3.7e-257 891.7 880 54.4
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 3.2e-256 888.6 776 58.1
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 4.1e-256 888.3 804 57.5
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 4.6e-255 884.8 771 58.2
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 1.4e-248 863.2 771 59.3
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 6.6e-246 854.4 776 56.6
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 3.3e-245 852.0 740 60.4
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 7.6e-242 840.9 722 60.8
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 9.6e-237 823.9 782 54.9
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.1e-232 810.4 745 56.0
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 2.7e-223 779.2 786 52.7
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 3.7e-220 768.8 775 53.8
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 4.6e-199 698.7 766 48.0
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 3.6e-183 646.0 527 63.6
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 6.3e-180 635.2 497 64.0
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 3.1e-179 632.9 537 61.3
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 4.5e-162 575.9 479 62.0
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 1.0e-161 574.7 769 44.2
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 5.0e-153 545.8 597 50.9
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 9.5e-152 541.6 426 63.6
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 1.1e-142 511.5 794 38.8
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 1.7e-140 504.2 514 54.9
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 2.2e-140 503.8 788 39.2
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 6.6e-121 439.1 404 58.2
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 8.7e-121 438.7 498 51.4
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 7.9e-98 362.5 754 33.0
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 7.9e-98 362.5 413 50.1
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 1.7e-92 344.7 824 28.8
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 1.1e-91 342.0 429 46.2
Hund23621 Selenicereus undatus HOM05D004656 ORTHO05D005404 4.6e-90 336.7 374 48.9
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 2.7e-82 310.8 190 72.1
arahy.Tifrunner.gnm1.ann1.QWV34J Arachis hypogaea HOM05D004656 ORTHO05D005404 2.6e-77 294.3 265 57.7
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 1.6e-74 285.0 229 62.4
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 9.7e-72 275.8 367 43.9
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.2e-68 264.6 223 61.0
SEGI_33901 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 1.7e-60 238.4 391 36.6
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 8.8e-57 226.1 191 62.8
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 4.0e-49 200.7 729 27.0
RcHm_v2.0_Chr5g0006431 Rosa chinensis HOM05D004656 ORTHO05D005404 7.0e-38 163.3 318 36.2
SGA_v2.0_scaffold159G37668 Striga asiatica HOM05D004656 ORTHO05D005404 2.5e-35 154.8 304 39.5
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 1.2e-34 152.5 225 38.2
Os02g0785900 Oryza sativa ssp. japonica HOM05D004656 ORTHO05D005404 2.1e-34 151.8 104 64.4
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.0e-28 131.3 80 71.2
TAR369G0180 Trochodendron aralioides HOM05D004656 ORTHO05D005404 5.0e-28 130.6 89 67.4
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.6e-26 125.6 77 71.4
CSS0005991 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.1e-26 125.2 105 56.2
SEGI_08767 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 2.1e-26 125.2 137 49.6
SHI02121 Sapria himalayana HOM05D004656 ORTHO05D005404 2.8e-26 124.8 256 33.6
Eucgr.C00045 Eucalyptus grandis HOM05D004656 ORTHO05D005404 6.2e-26 123.6 79 75.9
Zm00001eb384090 Zea mays HOM05D004656 ORTHO05D005404 1.1e-25 122.9 109 52.3
Zm00001eb125490 Zea mays HOM05D004656 ORTHO05D005404 2.3e-25 121.7 109 50.5
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.1e-25 121.3 80 67.5
Hma1.2p1_0144F.1_g064710 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 3.4e-24 117.9 61 85.2
PRCOL_00000091 Prasinoderma coloniale HOM05D004656 ORTHO05D005404 7.5e-24 116.7 481 23.9
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.2e-23 115.2 83 62.7
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.2e-23 115.2 90 60.0
Haze_06207 Corylus avellana HOM05D004656 ORTHO05D005404 8.3e-23 113.2 65 78.5
QL02p031126 Quercus lobata HOM05D004656 ORTHO05D005404 1.1e-22 112.8 172 45.3
Zm00001eb374130 Zea mays HOM05D004656 ORTHO05D005404 7.1e-22 110.2 78 62.8
Hma1.2p1_1241F.1_g269830 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 8.1e-18 96.7 61 73.8
EL10Ac3g05965 Beta vulgaris HOM05D004656 ORTHO05D005404 1.1e-17 96.3 62 80.6
EL10Ac6g14063 Beta vulgaris HOM05D004656 ORTHO05D005404 2.4e-17 95.1 59 81.4
MCO05G135 Micromonas commoda HOM05D004656 ORTHO05D005404 2.4e-17 95.1 588 21.4
Cre12.g556650 Chlamydomonas reinhardtii HOM05D004656 ORTHO05D005404 4.0e-17 94.4 512 21.5
EL10Ac9g22460 Beta vulgaris HOM05D004656 ORTHO05D005404 6.8e-17 93.6 57 82.5
MELO3C032683.2 Cucumis melo HOM05D004656 ORTHO05D005404 1.2e-16 92.8 54 77.8
MELO3C008912.2 Cucumis melo HOM05D004656 ORTHO05D005404 2.9e-15 88.2 55 72.7
SHI02114 Sapria himalayana HOM05D004656 ORTHO05D005404 3.8e-15 87.8 78 51.3
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.1e-14 86.3 80 52.5
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 1.9e-14 85.5 70 58.6
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 9.2e-14 83.2 55 69.1
Hund23620 Selenicereus undatus HOM05D004656 ORTHO05D005404 1.2e-13 82.8 63 61.9
Eucgr.C00011 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.5e-13 81.3 55 65.5
Eucgr.E03560 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.3e-12 79.3 75 53.3
Eucgr.L00388 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.3e-11 74.7 60 60.0
Zm00001eb266270 Zea mays HOM05D004656 ORTHO05D005404 4.3e-11 74.3 80 42.5
Eucgr.E03557 Eucalyptus grandis HOM05D004656 ORTHO05D005404 5.6e-11 73.9 61 55.7
SHI02119 Sapria himalayana HOM05D004656 ORTHO05D005404 1.3e-07 62.8 47 63.8
Actinidia29288 Actinidia chinensis HOM05D004656 ORTHO05D005404 2.9e-07 61.6 31 83.9
CSS0036547 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.2e-06 58.2 80 38.8


User provided reference genes

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