Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053922.1 Olea europaea HOM05D000464 ORTHO05D000408 4.8e-60 234.2 109 100.0
Oeu028813.2 Olea europaea HOM05D000464 ORTHO05D000408 9.2e-19 97.1 94 54.3
Oeu043491.2 Olea europaea HOM05D000464 ORTHO05D000408 3.5e-18 95.1 94 54.3
Oeu062237.1 Olea europaea HOM05D000464 ORTHO05D000408 2.3e-17 92.4 94 53.2
unitig_748.g7185 Utricularia gibba HOM05D000464 ORTHO05D000408 2.1e-15 85.9 94 50.0
Aqoxy7G03479 Aquilegia oxysepala HOM05D000464 ORTHO05D000408 1.0e-14 83.6 94 47.9
Migut.K00350 Erythranthe guttata HOM05D000464 ORTHO05D000408 1.0e-14 83.6 95 50.5
CANSAT11G1979 Cannabis sativa HOM05D000464 ORTHO05D000408 4.0e-14 81.6 94 48.9
arahy.Tifrunner.gnm1.ann1.01RQ4M Arachis hypogaea HOM05D000464 ORTHO05D000408 5.2e-14 81.3 95 49.5
MSTRG.26301 Avicennia marina HOM05D000464 ORTHO05D000408 5.2e-14 81.3 94 48.9
CSS0007258 Camellia sinensis var. sinensis HOM05D000464 ORTHO05D000408 6.8e-14 80.9 92 50.0
SGA_v2.0_scaffold206G41851 Striga asiatica HOM05D000464 ORTHO05D000408 6.8e-14 80.9 94 50.0
Lj7A453G71 Lonicera japonica HOM05D000464 ORTHO05D000408 8.9e-14 80.5 86 48.8
Phvul.003G158300 Phaseolus vulgaris HOM05D000464 ORTHO05D000408 1.5e-13 79.7 94 47.9
Rhsim01G0042900 Rhododendron simsii HOM05D000464 ORTHO05D000408 1.5e-13 79.7 88 50.0
COL.COLO4_18764 Corchorus olitorius HOM05D000464 ORTHO05D000408 2.0e-13 79.3 94 47.9
Rhsim01G0046500 Rhododendron simsii HOM05D000464 ORTHO05D000408 2.0e-13 79.3 89 49.4
TWI32G0008 Tripterygium wilfordii HOM05D000464 ORTHO05D000408 2.0e-13 79.3 94 47.9
Solyc07g005130.3 Solanum lycopersicum HOM05D000464 ORTHO05D000408 2.6e-13 79.0 92 47.8
Sopen07g001270 Solanum pennellii HOM05D000464 ORTHO05D000408 2.6e-13 79.0 92 47.8
PGSC0003DMG400003197 Solanum tuberosum HOM05D000464 ORTHO05D000408 2.6e-13 79.0 92 47.8
Dinv42893 Davidia involucrata HOM05D000464 ORTHO05D000408 4.4e-13 78.2 94 48.9
Dinv43208 Davidia involucrata HOM05D000464 ORTHO05D000408 4.4e-13 78.2 94 48.9
Manes.14G141900 Manihot esculenta HOM05D000464 ORTHO05D000408 4.4e-13 78.2 94 46.8
Cpa.g.sc46.116 Carica papaya HOM05D000464 ORTHO05D000408 5.8e-13 77.8 94 47.9
Duzib168G1592 Durio zibethinus HOM05D000464 ORTHO05D000408 5.8e-13 77.8 94 46.8
Glyma.13G155600 Glycine max HOM05D000464 ORTHO05D000408 5.8e-13 77.8 94 45.7
Peaxi162Scf00347g00524 Petunia axillaris HOM05D000464 ORTHO05D000408 5.8e-13 77.8 93 47.3
Thecc.09G034900 Theobroma cacao HOM05D000464 ORTHO05D000408 5.8e-13 77.8 94 46.8
TAR626G1749 Trochodendron aralioides HOM05D000464 ORTHO05D000408 5.8e-13 77.8 94 45.7
VMungo1215G0388 Vigna mungo HOM05D000464 ORTHO05D000408 5.8e-13 77.8 94 46.8
Cc06_g15380 Coffea canephora HOM05D000464 ORTHO05D000408 7.5e-13 77.4 94 47.9
Duzib187G1283 Durio zibethinus HOM05D000464 ORTHO05D000408 7.5e-13 77.4 94 45.7
Manes.06G038600 Manihot esculenta HOM05D000464 ORTHO05D000408 7.5e-13 77.4 94 46.8
DCAR_019367 Daucus carota HOM05D000464 ORTHO05D000408 9.8e-13 77.0 94 46.8
GSVIVG01001076001 Vitis vinifera HOM05D000464 ORTHO05D000408 9.8e-13 77.0 94 47.9
GSVIVG01003720001 Vitis vinifera HOM05D000464 ORTHO05D000408 9.8e-13 77.0 94 47.9
CAN.G520.13 Capsicum annuum HOM05D000464 ORTHO05D000408 1.3e-12 76.6 92 46.7
Hma1.2p1_0028F.1_g017290 Hydrangea macrophylla HOM05D000464 ORTHO05D000408 1.3e-12 76.6 94 45.7
Lj4g0017079 Lotus japonicus HOM05D000464 ORTHO05D000408 1.3e-12 76.6 94 46.8
Cfa020854 Carpinus fangiana HOM05D000464 ORTHO05D000279 1.7e-12 76.3 94 45.7
Haze_19245 Corylus avellana HOM05D000464 ORTHO05D000408 1.7e-12 76.3 94 45.7
HanXRQChr10g0314561 Helianthus annuus HOM05D000464 ORTHO05D000408 1.7e-12 76.3 96 43.8
vmacro13045 Vaccinium macrocarpon HOM05D000464 ORTHO05D000408 1.7e-12 76.3 87 48.3
Carub.0007s0949 Capsella rubella HOM05D000464 ORTHO05D000408 2.9e-12 75.5 94 46.8
Eucgr.C00381 Eucalyptus grandis HOM05D000464 ORTHO05D000408 2.9e-12 75.5 94 46.8
Lalb_Chr13g0301091 Lupinus albus HOM05D000464 ORTHO05D000408 2.9e-12 75.5 94 46.8
MBI15_g30905_MAGBIO Magnolia biondii HOM05D000464 ORTHO05D000408 2.9e-12 75.5 94 43.6
Nn2g12293 Nelumbo nucifera HOM05D000464 ORTHO05D000408 2.9e-12 75.5 86 46.5
Actinidia04274 Actinidia chinensis HOM05D000464 ORTHO05D000408 3.7e-12 75.1 94 44.7
Nitab4.5_0001094g0050 Nicotiana tabacum HOM05D000464 ORTHO05D000408 3.7e-12 75.1 93 46.2
Nitab4.5_0003856g0040 Nicotiana tabacum HOM05D000464 ORTHO05D000408 3.7e-12 75.1 93 46.2
Atru.chr7.173 Acer truncatum HOM05D000464 ORTHO05D000408 4.9e-12 74.7 94 47.9
Thhalv10025875m.g Eutrema salsugineum HOM05D000464 ORTHO05D000408 4.9e-12 74.7 94 45.7
MD15G1155900 Malus domestica HOM05D000464 ORTHO05D000408 4.9e-12 74.7 94 45.7
AL7G21040 Arabidopsis lyrata HOM05D000464 ORTHO05D000408 6.4e-12 74.3 94 44.7
AT4G31020 Arabidopsis thaliana HOM05D000464 ORTHO05D000408 6.4e-12 74.3 94 44.7
TWI34G1972 Tripterygium wilfordii HOM05D000464 ORTHO05D000408 6.4e-12 74.3 94 46.8
CiPaw.15G173200 Carya illinoinensis HOM05D000464 ORTHO05D000408 8.3e-12 73.9 94 44.7
Lalb_Chr08g0233911 Lupinus albus HOM05D000464 ORTHO05D000408 8.3e-12 73.9 94 45.7
Potri.018G111400 Populus trichocarpa HOM05D000464 ORTHO05D000408 8.3e-12 73.9 94 45.7
Prupe.7G259200 Prunus persica HOM05D000464 ORTHO05D000408 8.3e-12 73.9 94 45.7
PGR142G0107 Punica granatum HOM05D000464 ORTHO05D000408 8.3e-12 73.9 98 44.9
Sabra06G0143800 Salix brachista HOM05D000464 ORTHO05D000408 8.3e-12 73.9 94 45.7
Sabra06G0145200 Salix brachista HOM05D000464 ORTHO05D000408 8.3e-12 73.9 94 45.7
Sabra18G0094000 Salix brachista HOM05D000464 ORTHO05D000408 8.3e-12 73.9 94 45.7
CARHR238940 Cardamine hirsuta HOM05D000464 ORTHO05D000408 1.1e-11 73.6 94 44.7
CiPaw.16G115600 Carya illinoinensis HOM05D000464 ORTHO05D000408 1.1e-11 73.6 94 44.7
VMungo1309G3025 Vigna mungo HOM05D000464 ORTHO05D000408 1.1e-11 73.6 87 46.0
BcaNung02729 Brassica carinata HOM05D000464 ORTHO05D000408 1.4e-11 73.2 94 44.7
BolC7t46293H Brassica oleracea HOM05D000464 ORTHO05D000408 1.4e-11 73.2 94 44.7
BraA01t00666Z Brassica rapa HOM05D000464 ORTHO05D000408 1.4e-11 73.2 94 44.7
BraA03t15090Z Brassica rapa HOM05D000464 ORTHO05D000408 1.4e-11 73.2 94 44.7
Gohir.A05G050700 Gossypium hirsutum HOM05D000464 ORTHO05D000408 1.4e-11 73.2 94 43.6
Gohir.A07G025500 Gossypium hirsutum HOM05D000464 ORTHO05D000408 1.4e-11 73.2 86 43.0
Lsat_1_v5_gn_5_90860 Lactuca sativa HOM05D000464 ORTHO05D000408 1.4e-11 73.2 99 43.4
BcaC07g40942 Brassica carinata HOM05D000464 ORTHO05D000408 1.9e-11 72.8 94 44.7
Ciclev10009068m.g Citrus clementina HOM05D000464 ORTHO05D000408 1.9e-11 72.8 94 45.7
Gohir.D05G052300 Gossypium hirsutum HOM05D000464 ORTHO05D000408 1.9e-11 72.8 94 43.6
Gohir.D07G029200 Gossypium hirsutum HOM05D000464 ORTHO05D000408 1.9e-11 72.8 86 43.0
Gorai.001G030500 Gossypium raimondii HOM05D000464 ORTHO05D000408 1.9e-11 72.8 86 43.0
MD02G1010900 Malus domestica HOM05D000464 ORTHO05D000408 1.9e-11 72.8 94 45.7
Sc14g0000020 Simmondsia chinensis HOM05D000464 ORTHO05D000408 1.9e-11 72.8 86 46.5
TWI63G0058 Tripterygium wilfordii HOM05D000464 ORTHO05D000408 1.9e-11 72.8 94 44.7
BcaNung03420 Brassica carinata HOM05D000464 ORTHO05D000408 2.4e-11 72.4 94 44.7
Thhalv10000464m.g Eutrema salsugineum HOM05D000464 ORTHO05D000408 2.4e-11 72.4 94 43.6
Potri.006G188100 Populus trichocarpa HOM05D000464 ORTHO05D000408 2.4e-11 72.4 94 44.7
RcHm_v2.0_Chr2g0086141 Rosa chinensis HOM05D000464 ORTHO05D000408 2.4e-11 72.4 94 45.7
Gorai.009G054100 Gossypium raimondii HOM05D000464 ORTHO05D000408 3.2e-11 72.0 94 43.6
ATR0184G003 Amborella trichopoda HOM05D000464 ORTHO05D000408 4.1e-11 71.6 94 43.6
CsaV3_1G028670 Cucumis sativus L. HOM05D000464 ORTHO05D000408 4.1e-11 71.6 94 42.6
Gohir.A06G096500 Gossypium hirsutum HOM05D000464 ORTHO05D000408 4.1e-11 71.6 86 44.2
BcaNung01548 Brassica carinata HOM05D000464 ORTHO05D000408 5.4e-11 71.2 94 42.6
BolC1t00777H Brassica oleracea HOM05D000464 ORTHO05D000408 5.4e-11 71.2 94 43.6
Gohir.D06G096800 Gossypium hirsutum HOM05D000464 ORTHO05D000408 5.4e-11 71.2 86 44.2
QL02p092457 Quercus lobata HOM05D000464 ORTHO05D000408 5.4e-11 71.2 94 44.7
BcaC09g51890 Brassica carinata HOM05D000464 ORTHO05D000408 7.0e-11 70.9 94 42.6
A09p56360 Brassica napus HOM05D000464 ORTHO05D000408 7.0e-11 70.9 94 43.6
C08p39340 Brassica napus HOM05D000464 ORTHO05D000408 7.0e-11 70.9 94 43.6
BolC8t51506H Brassica oleracea HOM05D000464 ORTHO05D000408 7.0e-11 70.9 94 43.6
BraA09t41031Z Brassica rapa HOM05D000464 ORTHO05D000408 7.0e-11 70.9 94 43.6
CSS0027166 Camellia sinensis var. sinensis HOM05D000464 ORTHO05D000408 7.0e-11 70.9 95 46.3
CSS0046335 Camellia sinensis var. sinensis HOM05D000464 ORTHO05D000408 7.0e-11 70.9 95 46.3
MELO3C010246.2 Cucumis melo HOM05D000464 ORTHO05D000408 7.0e-11 70.9 94 41.5
PSO801G0464 Papaver somniferum HOM05D000464 ORTHO05D000408 7.0e-11 70.9 94 44.7
Sp7g28910 Schrenkiella parvula HOM05D000464 ORTHO05D000408 7.0e-11 70.9 94 41.5
ClCG06G012180 Citrullus lanatus HOM05D000464 ORTHO05D000408 9.2e-11 70.5 94 41.5
Phvul.009G194400 Phaseolus vulgaris HOM05D000464 ORTHO05D000408 9.2e-11 70.5 85 45.9
AL4G14670 Arabidopsis lyrata HOM05D000464 ORTHO05D000408 1.2e-10 70.1 94 42.6
BcaB03g12673 Brassica carinata HOM05D000464 ORTHO05D000408 1.2e-10 70.1 86 44.2
DCAR_014820 Daucus carota HOM05D000464 ORTHO05D000408 1.2e-10 70.1 94 43.6
ECA234G4022 Erigeron canadensis HOM05D000464 ORTHO05D000408 1.2e-10 70.1 103 40.8
FAN28G2134 Fragaria x ananassa HOM05D000464 ORTHO05D000408 1.2e-10 70.1 94 45.7
Hma1.2p1_0222F.1_g093220 Hydrangea macrophylla HOM05D000464 ORTHO05D000408 1.2e-10 70.1 94 43.6
Aa31LG7G12430 Aethionema arabicum HOM05D000464 ORTHO05D000408 1.6e-10 69.7 92 42.4
AT2G24320 Arabidopsis thaliana HOM05D000464 ORTHO05D000408 1.6e-10 69.7 94 42.6
BcaC01g01118 Brassica carinata HOM05D000464 ORTHO05D000408 1.6e-10 69.7 86 43.0
BraA04t17472Z Brassica rapa HOM05D000464 ORTHO05D000408 1.6e-10 69.7 86 43.0
FvH4_1g01310 Fragaria vesca HOM05D000464 ORTHO05D000408 1.6e-10 69.7 94 45.7
FAN26G0727 Fragaria x ananassa HOM05D000464 ORTHO05D000408 1.6e-10 69.7 94 45.7
Gorai.010G111600 Gossypium raimondii HOM05D000464 ORTHO05D000408 1.6e-10 69.7 86 43.0
BraA08t33854Z Brassica rapa HOM05D000464 ORTHO05D000408 2.0e-10 69.3 86 44.2
FAN19G1833 Fragaria x ananassa HOM05D000464 ORTHO05D000408 2.0e-10 69.3 94 45.7
Sp4g03320 Schrenkiella parvula HOM05D000464 ORTHO05D000408 2.0e-10 69.3 94 41.5
CDE05G2167 Ceratophyllum demersum HOM05D000464 ORTHO05D000408 2.7e-10 68.9 94 41.5
HanXRQChr12g0357311 Helianthus annuus HOM05D000464 ORTHO05D000408 2.7e-10 68.9 91 41.8
FAN23G3118 Fragaria x ananassa HOM05D000464 ORTHO05D000408 3.5e-10 68.6 94 44.7
HanXRQChr05g0141411 Helianthus annuus HOM05D000464 ORTHO05D000408 3.5e-10 68.6 96 41.7
Hund21623 Selenicereus undatus HOM05D000464 ORTHO05D000408 3.5e-10 68.6 94 43.6
Ca_21104_v3 Cicer arietinum L. HOM05D000464 ORTHO05D000408 4.6e-10 68.2 94 44.7
A04p18610 Brassica napus HOM05D000464 ORTHO05D000408 6.0e-10 67.8 86 41.9
BolC4t26941H Brassica oleracea HOM05D000464 ORTHO05D000408 6.0e-10 67.8 86 41.9
TPR.G37130 Trifolium pratense HOM05D000464 ORTHO05D000408 6.0e-10 67.8 94 45.7
HPP92_010388 Vanilla planifolia HOM05D000464 ORTHO05D000408 6.0e-10 67.8 94 43.6
EL10Ac8g18845 Beta vulgaris HOM05D000464 ORTHO05D000408 7.8e-10 67.4 98 40.8
BolC3t21142H Brassica oleracea HOM05D000464 ORTHO05D000408 7.8e-10 67.4 86 41.9
CARHR117770 Cardamine hirsuta HOM05D000464 ORTHO05D000408 7.8e-10 67.4 94 42.6
PSO339G5201 Papaver somniferum HOM05D000464 ORTHO05D000408 1.0e-09 67.0 94 42.6
arahy.Tifrunner.gnm1.ann1.BG6V47 Arachis hypogaea HOM05D000464 ORTHO05D000408 1.3e-09 66.6 57 57.9
Nn8g39794 Nelumbo nucifera HOM05D000464 ORTHO05D000408 1.3e-09 66.6 86 41.9
PSO339G3365 Papaver somniferum HOM05D000464 ORTHO05D000408 1.3e-09 66.6 94 42.6
Sed0024895 Sechium edule HOM05D000464 ORTHO05D000408 1.7e-09 66.2 95 42.1
Carub.0004s0365 Capsella rubella HOM05D000464 ORTHO05D000408 2.3e-09 65.9 94 40.4
Sed0014507 Sechium edule HOM05D000464 ORTHO05D000408 5.0e-09 64.7 95 42.1
C04p53930 Brassica napus HOM05D000464 ORTHO05D000408 6.6e-09 64.3 87 42.5
HPP92_010394 Vanilla planifolia HOM05D000464 ORTHO05D000408 8.6e-09 63.9 71 46.5
THA.LOC104819914 Tarenaya hassleriana HOM05D000464 ORTHO05D000408 1.1e-08 63.5 94 40.4
AUR62011276 Chenopodium quinoa HOM05D000464 ORTHO05D000408 2.5e-08 62.4 57 50.9
ECA236G1171 Erigeron canadensis HOM05D000464 ORTHO05D000408 4.3e-08 61.6 99 38.4
Glyma.17G076051 Glycine max HOM05D000464 ORTHO05D000408 4.3e-08 61.6 68 45.6
arahy.Tifrunner.gnm1.ann1.C7XULR Arachis hypogaea HOM05D000464 ORTHO05D000408 7.3e-08 60.8 86 44.2
Glyma.15G206300 Glycine max HOM05D000464 ORTHO05D000408 7.3e-08 60.8 88 42.0
Psat4g007480 Pisum sativum HOM05D000464 ORTHO05D000408 9.5e-08 60.5 94 42.6
AUR62039742 Chenopodium quinoa HOM05D000464 ORTHO05D000408 1.6e-07 59.7 58 51.7
Lj9C712G10 Lonicera japonica HOM05D000464 ORTHO05D000408 1.6e-07 59.7 80 40.0
Aa31LG2G19290 Aethionema arabicum HOM05D000464 ORTHO05D000408 2.8e-07 58.9 94 36.2
Ah.14g078180 Amaranthus hybridus HOM05D000464 ORTHO05D000408 2.8e-07 58.9 86 38.4
arahy.Tifrunner.gnm1.ann1.SSDN3A Arachis hypogaea HOM05D000464 ORTHO05D000408 2.8e-07 58.9 86 43.0
Lsat_1_v5_gn_8_61100 Lactuca sativa HOM05D000464 ORTHO05D000408 2.8e-07 58.9 66 47.0
HPP92_010432 Vanilla planifolia HOM05D000464 ORTHO05D000408 4.7e-07 58.2 58 50.0
SHI03211 Sapria himalayana HOM05D000464 ORTHO05D000408 1.4e-06 56.6 94 37.2
Ca_31262_v3 Cicer arietinum L. HOM05D000464 ORTHO05D000408 8.9e-06 53.9 57 49.1


User provided reference genes

Program Settings