Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053892.1 Olea europaea HOM05D005166 ORTHO05D006120 1.1e-231 807.0 657 100.0
Migut.D00877 Erythranthe guttata HOM05D005166 ORTHO05D006120 3.8e-51 207.2 428 46.0
Dinv17047 Davidia involucrata HOM05D005166 ORTHO05D006120 4.1e-37 160.6 381 44.4
Dinv42991 Davidia involucrata HOM05D005166 ORTHO05D006120 4.1e-37 160.6 381 44.4
Dinv43106 Davidia involucrata HOM05D005166 ORTHO05D006120 4.1e-37 160.6 381 44.4
Dinv34287 Davidia involucrata HOM05D005166 ORTHO05D006120 5.9e-36 156.8 364 46.4
SGA_v2.0_scaffold111G31544 Striga asiatica HOM05D005166 ORTHO05D006120 1.4e-32 145.6 372 41.4
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla HOM05D005166 ORTHO05D006120 3.0e-32 144.4 377 42.7
CSS0046995 Camellia sinensis var. sinensis HOM05D005166 ORTHO05D006120 2.2e-30 138.3 392 42.9
MSTRG.21221 Avicennia marina HOM05D005166 ORTHO05D006120 1.8e-29 135.2 204 61.3
SalBow6G2010 Salvia bowleyana HOM05D005166 ORTHO05D006120 3.5e-28 131.0 380 41.8
TAR633G1610 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.8e-24 118.6 435 37.5
Potri.009G036900 Populus trichocarpa HOM05D005166 ORTHO05D006120 3.0e-24 117.9 388 42.0
Nn2g11213 Nelumbo nucifera HOM05D005166 ORTHO05D006120 5.7e-23 113.6 427 38.2
Ciclev10030390m.g Citrus clementina HOM05D005166 ORTHO05D006120 1.7e-22 112.1 391 38.4
Nitab4.5_0001999g0010 Nicotiana tabacum HOM05D005166 ORTHO05D006120 1.4e-21 109.0 405 39.0
Phvul.011G061700 Phaseolus vulgaris HOM05D005166 ORTHO05D006120 5.3e-21 107.1 360 40.3
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum HOM05D005166 ORTHO05D006120 1.2e-20 105.9 379 39.6
PGSC0003DMG400027986 Solanum tuberosum HOM05D005166 ORTHO05D006120 5.9e-20 103.6 283 43.5
QL01p029224 Quercus lobata HOM05D005166 ORTHO05D006120 7.7e-20 103.2 392 39.3
TAR636G0138 Trochodendron aralioides HOM05D005166 ORTHO05D006120 7.7e-20 103.2 413 38.0
TAR636G0020 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.7e-19 102.1 413 38.0
MD03G1086100 Malus domestica HOM05D005166 ORTHO05D006120 2.2e-19 101.7 378 41.0
Duzib168G0713 Durio zibethinus HOM05D005166 ORTHO05D006120 3.8e-19 100.9 374 41.4
Rhsim13G0077000 Rhododendron simsii HOM05D005166 ORTHO05D006120 3.8e-19 100.9 401 38.7
Nitab4.5_0005248g0020 Nicotiana tabacum HOM05D005166 ORTHO05D006120 8.5e-19 99.8 405 38.3
RcHm_v2.0_Chr5g0066361 Rosa chinensis HOM05D005166 ORTHO05D006120 1.5e-18 99.0 382 39.3
Peaxi162Scf00676g00220 Petunia axillaris HOM05D005166 ORTHO05D006120 7.2e-18 96.7 393 39.4
MD11G1094700 Malus domestica HOM05D005166 ORTHO05D006120 1.2e-17 95.9 422 37.2
CiPaw.13G089200 Carya illinoinensis HOM05D005166 ORTHO05D006120 2.1e-17 95.1 398 35.9
Prupe.6G070300 Prunus persica HOM05D005166 ORTHO05D006120 2.7e-17 94.7 389 38.6
Cpa.g.sc81.96 Carica papaya HOM05D005166 ORTHO05D006120 3.0e-16 91.3 424 37.5
AUR62001736 Chenopodium quinoa HOM05D005166 ORTHO05D006120 8.8e-16 89.7 377 36.9
vmacro03027 Vaccinium macrocarpon HOM05D005166 ORTHO05D006120 1.5e-15 89.0 450 34.9
MBI14_g11598_MAGBIO Magnolia biondii HOM05D005166 ORTHO05D006120 5.7e-15 87.0 422 34.6
Medtr4g064740 Medicago truncatula HOM05D005166 ORTHO05D006120 9.7e-15 86.3 411 38.0
FAN25G3327 Fragaria x ananassa HOM05D005166 ORTHO05D006120 1.7e-14 85.5 397 38.3
FAN16G3680 Fragaria x ananassa HOM05D005166 ORTHO05D006120 2.2e-14 85.1 389 38.6
Haze_24175 Corylus avellana HOM05D005166 ORTHO05D006120 3.7e-14 84.3 420 36.0
FvH4_3g36942 Fragaria vesca HOM05D005166 ORTHO05D006120 1.1e-13 82.8 389 38.3
FAN11G2353 Fragaria x ananassa HOM05D005166 ORTHO05D006120 2.4e-13 81.6 389 38.3
Solyc09g030390.3 Solanum lycopersicum HOM05D005166 ORTHO05D006120 2.4e-13 81.6 352 35.8
Potri.001G244600 Populus trichocarpa HOM05D005166 ORTHO05D006120 3.1e-13 81.3 389 37.3
FAN21G1054 Fragaria x ananassa HOM05D005166 ORTHO05D006120 5.3e-13 80.5 272 44.9
Aqoxy2G02310 Aquilegia oxysepala HOM05D005166 ORTHO05D006120 1.0e-11 76.3 415 33.5
Sopen09g013470 Solanum pennellii HOM05D005166 ORTHO05D006120 1.0e-11 76.3 486 32.3
COL.COLO4_18578 Corchorus olitorius HOM05D005166 ORTHO05D006120 6.5e-11 73.6 378 36.2
Haze_24170 Corylus avellana HOM05D005166 ORTHO05D006120 8.5e-11 73.2 420 34.5
CAN.G3.46 Capsicum annuum HOM05D005166 ORTHO05D006120 1.5e-10 72.4 296 31.8
Eucgr.B02307 Eucalyptus grandis HOM05D005166 ORTHO05D006120 3.6e-09 67.8 145 58.6
TPR.G23607 Trifolium pratense HOM05D005166 ORTHO05D006120 3.6e-09 67.8 397 36.0
Sc12g0001240 Simmondsia chinensis HOM05D005166 ORTHO05D006120 6.1e-09 67.0 241 42.3
PSO339G5769 Papaver somniferum HOM05D005166 ORTHO05D006120 2.3e-08 65.1 398 34.9
Sabra09G0026100 Salix brachista HOM05D005166 ORTHO05D006120 3.0e-08 64.7 299 31.1
THA.LOC104800686 Tarenaya hassleriana HOM05D005166 ORTHO05D006120 1.5e-07 62.4 263 41.8
VMungo1127G2033 Vigna mungo HOM05D005166 ORTHO05D006120 3.4e-07 61.2 395 34.2
Actinidia33768 Actinidia chinensis HOM05D005166 ORTHO05D006120 3.7e-06 57.8 375 33.6
Cc01_g13350 Coffea canephora HOM05D005166 ORTHO05D006120 3.7e-06 57.8 277 37.5
PGR102G2168 Punica granatum HOM05D005166 ORTHO05D006120 8.3e-06 56.6 360 35.3
HPP92_012609 Vanilla planifolia HOM05D005166 ORTHO05D006120 8.3e-06 56.6 174 50.0


User provided reference genes

Program Settings