Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 2.7e-143 511.9 249 100.0
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 7.8e-98 360.9 249 75.9
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 2.1e-95 352.8 256 73.4
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 2.8e-95 352.4 253 73.5
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 4.0e-94 348.6 259 74.5
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 4.0e-94 348.6 250 74.8
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 2.0e-93 346.3 252 71.0
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 2.0e-93 346.3 253 72.7
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 2.6e-93 345.9 252 70.6
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 9.8e-93 344.0 260 73.1
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 1.3e-92 343.6 250 71.6
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 2.9e-92 342.4 253 69.6
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 1.1e-91 340.5 254 69.3
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 2.4e-91 339.3 254 68.9
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 1.6e-90 336.7 251 70.5
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 1.0e-89 334.0 251 70.1
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 2.3e-89 332.8 264 66.3
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 3.0e-89 332.4 252 71.4
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 3.9e-89 332.0 259 69.1
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 3.9e-89 332.0 253 68.0
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 1.1e-88 330.5 257 70.0
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 1.1e-88 330.5 253 69.2
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 1.5e-88 330.1 253 68.8
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 2.5e-88 329.3 249 70.3
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 2.5e-88 329.3 252 69.4
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 5.6e-88 328.2 252 67.9
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 1.6e-87 326.6 250 70.0
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 2.8e-87 325.9 251 68.5
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.8e-87 325.9 252 70.6
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 8.1e-87 324.3 262 66.8
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 1.1e-86 323.9 257 71.2
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 2.3e-86 322.8 251 68.5
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.1e-86 322.4 251 69.3
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.1e-86 322.4 251 69.3
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 3.1e-86 322.4 250 66.8
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 5.2e-86 321.6 251 70.1
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.2e-86 321.6 251 70.1
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 6.8e-86 321.2 241 70.1
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 1.2e-85 320.5 250 68.8
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.2e-85 320.5 249 67.5
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 1.2e-85 320.5 249 67.5
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.5e-85 320.1 247 68.4
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.6e-85 319.3 252 69.0
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 2.6e-85 319.3 265 65.7
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 2.6e-85 319.3 249 69.5
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 5.8e-85 318.2 300 60.7
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.7e-84 316.6 250 66.4
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 3.7e-84 315.5 254 67.3
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 8.3e-84 314.3 260 65.8
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 8.3e-84 314.3 256 67.6
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 3.2e-83 312.4 252 66.3
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 4.1e-83 312.0 253 67.2
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 4.1e-83 312.0 255 65.9
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 7.1e-83 311.2 250 67.6
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 9.2e-83 310.8 251 67.7
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 2.1e-82 309.7 251 66.1
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 4.6e-82 308.5 252 66.3
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 3.0e-81 305.8 283 61.8
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 8.6e-81 304.3 241 67.6
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 8.6e-81 304.3 253 65.2
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 1.5e-80 303.5 251 64.9
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 1.9e-80 303.1 247 66.4
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 1.9e-80 303.1 250 64.4
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 5.6e-80 301.6 260 61.9
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 5.6e-80 301.6 260 61.9
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 5.6e-80 301.6 253 64.0
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 5.6e-80 301.6 246 63.8
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 9.5e-80 300.8 258 62.4
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 1.2e-79 300.4 257 62.3
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 1.6e-79 300.1 256 63.7
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 2.8e-79 299.3 211 73.0
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 6.2e-79 298.1 252 63.5
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 1.4e-78 297.0 246 64.2
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 2.4e-78 296.2 203 71.9
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 6.8e-78 294.7 256 61.3
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 1.5e-77 293.5 248 62.9
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 4.4e-77 292.0 226 69.5
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 9.9e-77 290.8 250 64.0
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 3.8e-76 288.9 173 82.7
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 4.9e-76 288.5 288 57.6
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 6.4e-76 288.1 248 62.9
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.4e-75 287.0 259 61.4
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 2.4e-75 286.2 169 79.9
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 2.4e-75 286.2 249 63.1
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.2e-75 285.8 259 62.2
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 7.1e-75 284.6 260 58.8
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.7e-73 280.0 254 60.2
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.7e-73 280.0 254 60.2
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 5.1e-73 278.5 210 67.1
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 6.6e-73 278.1 277 57.4
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 6.6e-73 278.1 249 61.0
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 6.6e-73 278.1 249 61.0
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 6.6e-73 278.1 249 61.0
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 1.9e-72 276.6 252 61.5
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 1.2e-71 273.9 252 61.1
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 2.1e-66 256.5 180 71.1
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 9.6e-64 247.7 139 87.1
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 1.3e-63 247.3 177 70.6
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 2.4e-62 243.0 192 68.2
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 3.4e-61 239.2 241 56.4
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 2.4e-59 233.0 227 53.3
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.8e-57 226.9 253 52.6
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 6.2e-55 218.4 144 76.4
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 1.4e-54 217.2 189 57.1
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 1.8e-54 216.9 193 58.0
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 1.5e-53 213.8 119 86.6
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 3.5e-50 202.6 140 70.0
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 5.1e-49 198.7 185 57.3
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 6.7e-49 198.4 145 66.9
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 2.7e-42 176.4 152 64.5
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 3.9e-41 172.6 205 53.2
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 1.2e-37 161.0 99 79.8
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 4.3e-32 142.5 105 66.7
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 1.1e-27 127.9 99 63.6
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 4.7e-26 122.5 163 43.6
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.4e-25 120.9 101 65.3
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 3.7e-23 112.8 55 92.7
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 7.7e-21 105.1 95 54.7
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.1e-19 101.3 49 91.8
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 5.2e-17 92.4 56 78.6
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 3.8e-12 76.3 38 81.6
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 9.4e-11 71.6 71 52.1
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 1.3e-07 61.2 31 83.9
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 2.4e-06 57.0 33 69.7
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 3.1e-06 56.6 35 68.6


User provided reference genes

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