Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 5.6e-40 167.2 84 100.0
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 2.8e-31 138.3 78 85.9
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 6.2e-31 137.1 78 85.9
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.8e-30 135.6 78 84.6
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 3.1e-30 134.8 78 84.6
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 3.1e-30 134.8 78 84.6
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 5.2e-30 134.0 78 84.6
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 5.2e-30 134.0 86 80.2
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 8.9e-30 133.3 76 85.5
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.2e-29 132.9 78 82.1
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 1.2e-29 132.9 78 82.1
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 4.4e-29 131.0 78 80.8
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.8e-29 130.6 78 79.5
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.8e-29 130.6 78 79.5
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 9.8e-29 129.8 78 80.8
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 1.3e-28 129.4 75 80.0
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 1.3e-28 129.4 78 79.5
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 1.7e-28 129.0 78 78.2
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 2.2e-28 128.6 78 78.2
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 3.7e-28 127.9 78 76.9
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 3.7e-28 127.9 78 79.5
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 8.3e-28 126.7 78 79.5
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 8.3e-28 126.7 78 78.2
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.1e-27 126.3 78 79.5
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 1.1e-27 126.3 78 75.6
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 1.4e-27 125.9 78 76.9
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 1.4e-27 125.9 78 79.5
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 1.4e-27 125.9 78 78.2
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 1.9e-27 125.6 78 76.9
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 2.4e-27 125.2 78 76.9
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 2.4e-27 125.2 79 75.9
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 2.4e-27 125.2 78 76.9
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 2.4e-27 125.2 78 74.4
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 3.2e-27 124.8 78 78.2
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 3.2e-27 124.8 78 78.2
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 3.2e-27 124.8 78 74.4
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 3.2e-27 124.8 78 75.6
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 4.1e-27 124.4 78 76.9
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 4.1e-27 124.4 78 75.6
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 4.1e-27 124.4 78 75.6
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 5.4e-27 124.0 78 75.6
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 7.0e-27 123.6 78 75.6
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 7.0e-27 123.6 78 74.4
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 9.2e-27 123.2 78 75.6
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 9.2e-27 123.2 78 75.6
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 1.2e-26 122.9 78 76.9
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 1.2e-26 122.9 78 73.1
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 1.6e-26 122.5 78 74.4
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 1.6e-26 122.5 78 74.4
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 2.0e-26 122.1 78 74.4
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 2.0e-26 122.1 77 75.3
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 2.0e-26 122.1 78 78.2
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 2.0e-26 122.1 78 74.4
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 2.0e-26 122.1 78 74.4
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 2.0e-26 122.1 75 77.3
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 2.0e-26 122.1 78 74.4
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 2.7e-26 121.7 78 74.4
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 2.7e-26 121.7 78 74.4
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 2.7e-26 121.7 78 75.6
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 3.5e-26 121.3 78 73.1
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 4.6e-26 120.9 78 71.8
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 4.6e-26 120.9 78 75.6
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 4.6e-26 120.9 78 75.6
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 6.0e-26 120.6 78 71.8
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 7.8e-26 120.2 78 71.8
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.3e-25 119.4 71 81.7
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 1.3e-25 119.4 78 73.1
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.3e-25 119.4 78 71.8
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 1.3e-25 119.4 78 73.1
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 1.7e-25 119.0 78 74.4
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 2.3e-25 118.6 78 74.4
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 2.3e-25 118.6 78 74.4
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 2.3e-25 118.6 78 71.8
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 2.3e-25 118.6 78 73.1
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 3.0e-25 118.2 76 72.4
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 5.0e-25 117.5 78 70.5
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 5.0e-25 117.5 78 69.2
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 6.6e-25 117.1 78 73.1
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 6.6e-25 117.1 78 71.8
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 6.6e-25 117.1 75 74.7
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 6.6e-25 117.1 78 71.8
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 6.6e-25 117.1 78 70.5
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 8.6e-25 116.7 78 71.8
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.1e-24 116.3 71 80.3
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.5e-24 115.9 78 70.5
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 1.5e-24 115.9 79 69.6
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 3.3e-24 114.8 78 70.5
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 3.3e-24 114.8 78 67.9
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 4.3e-24 114.4 75 74.7
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 4.3e-24 114.4 78 71.8
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 4.3e-24 114.4 78 71.8
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 4.3e-24 114.4 78 71.8
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 4.3e-24 114.4 78 71.8
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 5.6e-24 114.0 78 69.2
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 5.6e-24 114.0 76 71.1
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 5.6e-24 114.0 65 83.1
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 7.3e-24 113.6 75 73.3
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 9.5e-24 113.2 65 81.5
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 1.6e-23 112.5 75 72.0
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.6e-23 112.5 75 72.0
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 2.1e-23 112.1 75 72.0
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 2.8e-23 111.7 78 66.7
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 3.6e-23 111.3 78 69.2
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 3.6e-23 111.3 78 66.7
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 3.6e-23 111.3 78 66.7
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 4.7e-23 110.9 78 64.1
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 4.7e-23 110.9 78 67.9
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 6.2e-23 110.5 75 72.0
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 5.2e-22 107.5 73 69.9
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 7.5e-21 103.6 78 62.8
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 9.9e-21 103.2 75 61.3
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 9.9e-21 103.2 106 53.8
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 6.4e-20 100.5 74 64.9
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 6.4e-20 100.5 74 66.2
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 1.9e-19 99.0 78 57.7
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 4.1e-19 97.8 78 59.0
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 9.2e-19 96.7 78 59.0
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 1.6e-18 95.9 79 55.7
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 1.1e-16 89.7 107 48.6
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.5e-16 89.4 72 58.3
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 1.5e-16 89.4 71 57.7
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 2.5e-16 88.6 80 61.2
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 2.8e-15 85.1 50 82.0
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 3.6e-15 84.7 67 65.7
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 3.1e-14 81.6 63 57.1
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 3.1e-14 81.6 78 53.8
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 4.0e-14 81.3 80 57.5
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 3.8e-12 74.7 42 81.0
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 4.1e-11 71.2 44 68.2
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.6e-10 69.3 43 74.4
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 3.9e-09 64.7 42 61.9
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 5.1e-09 64.3 43 69.8
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 4.3e-08 61.2 39 74.4


User provided reference genes

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