Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 3.9e-105 384.8 192 100.0
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 6.2e-71 271.2 172 75.0
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 1.3e-68 263.5 179 73.7
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 2.2e-68 262.7 172 77.9
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 2.1e-66 256.1 181 70.7
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 4.6e-66 255.0 170 75.3
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 7.9e-66 254.2 170 71.8
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 1.3e-65 253.4 167 74.9
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 1.8e-65 253.1 167 73.7
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 1.8e-65 253.1 170 74.7
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 1.8e-65 253.1 170 71.2
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 2.3e-65 252.7 170 72.9
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 2.3e-65 252.7 167 74.3
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 2.3e-65 252.7 170 71.8
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 3.0e-65 252.3 179 69.3
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 3.9e-65 251.9 170 74.1
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 3.9e-65 251.9 170 73.5
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 6.7e-65 251.1 176 68.8
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 8.7e-65 250.8 179 68.7
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 8.7e-65 250.8 170 72.9
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 1.1e-64 250.4 170 71.8
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 1.1e-64 250.4 170 74.1
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 1.5e-64 250.0 176 68.2
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 1.5e-64 250.0 179 68.7
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 1.5e-64 250.0 176 69.3
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 1.9e-64 249.6 170 71.2
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 3.3e-64 248.8 167 73.1
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 7.4e-64 247.7 179 68.2
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 7.4e-64 247.7 170 72.4
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 9.7e-64 247.3 170 73.5
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 9.7e-64 247.3 170 70.6
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 9.7e-64 247.3 170 70.6
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 9.7e-64 247.3 170 70.6
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 9.7e-64 247.3 169 71.0
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 9.7e-64 247.3 167 71.9
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 1.3e-63 246.9 170 70.0
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 1.3e-63 246.9 179 67.6
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 1.3e-63 246.9 170 70.6
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 1.6e-63 246.5 169 69.8
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 2.8e-63 245.7 172 69.2
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 3.7e-63 245.4 167 70.7
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 6.3e-63 244.6 179 66.5
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 8.2e-63 244.2 170 68.2
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 1.1e-62 243.8 179 67.0
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 1.1e-62 243.8 179 67.0
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 1.4e-62 243.4 168 70.2
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 1.4e-62 243.4 170 68.8
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 4.1e-62 241.9 179 67.6
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 5.3e-62 241.5 177 67.2
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 6.9e-62 241.1 171 68.4
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 9.0e-62 240.7 179 64.8
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 1.5e-61 240.0 174 69.5
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 1.5e-61 240.0 174 67.2
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 3.4e-61 238.8 174 66.1
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.4e-61 238.8 171 69.6
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 3.4e-61 238.8 178 66.9
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 3.4e-61 238.8 170 71.8
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 4.5e-61 238.4 175 66.3
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 4.5e-61 238.4 170 67.6
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 4.5e-61 238.4 202 61.9
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 5.9e-61 238.0 175 67.4
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 1.0e-60 237.3 174 65.5
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 1.0e-60 237.3 173 68.2
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 1.3e-60 236.9 155 75.5
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 1.3e-60 236.9 177 66.7
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 1.3e-60 236.9 179 66.5
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.7e-60 236.5 179 64.8
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 2.2e-60 236.1 174 68.4
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 2.9e-60 235.7 174 67.2
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 5.0e-60 235.0 186 65.1
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 1.9e-59 233.0 180 64.4
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 5.5e-59 231.5 193 60.6
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 9.4e-59 230.7 174 65.5
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 3.6e-58 228.8 170 64.1
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 6.1e-58 228.0 170 66.5
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 1.0e-57 227.3 173 67.1
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 5.1e-57 224.9 169 65.7
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 8.8e-57 224.2 173 64.2
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 1.1e-56 223.8 170 67.1
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 3.3e-56 222.2 172 64.5
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 1.8e-54 216.5 170 67.1
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 2.0e-53 213.0 168 59.5
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 1.7e-52 209.9 138 71.7
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 1.8e-49 199.9 172 55.2
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 1.7e-47 193.4 141 64.5
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 1.7e-47 193.4 169 60.4
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 1.9e-43 179.9 170 55.3
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 4.7e-42 175.3 136 63.2
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 1.1e-40 170.6 108 76.9
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 2.7e-34 149.4 109 69.7
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 8.0e-34 147.9 105 71.4
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 8.0e-34 147.9 105 71.4
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 2.0e-29 133.3 170 45.9
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 1.2e-24 117.5 95 63.2
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 2.6e-24 116.3 82 75.6
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 2.6e-24 116.3 82 75.6
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 5.2e-17 92.0 59 74.6
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 5.7e-16 88.6 175 36.0
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 4.9e-15 85.5 73 47.9
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 9.2e-14 81.3 157 37.6
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 2.9e-12 76.3 141 39.0
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 1.3e-07 60.8 37 75.7


User provided reference genes

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