Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053627.1 Olea europaea HOM05D002412 ORTHO05D002516 3.4e-68 261.5 132 100.0
Oeu020549.2 Olea europaea HOM05D002412 ORTHO05D002516 1.3e-35 153.3 120 70.8
Peaxi162Scf00081g00269 Petunia axillaris HOM05D002412 ORTHO05D002516 4.8e-22 108.2 139 51.1
Nitab4.5_0000497g0080 Nicotiana tabacum HOM05D002412 ORTHO05D002516 5.3e-21 104.8 123 52.0
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 5.3e-21 104.8 118 54.2
Oeu037507.3 Olea europaea HOM05D006761 ORTHO05D002516 9.1e-21 104.0 123 53.7
Nitab4.5_0003725g0030 Nicotiana tabacum HOM05D002412 ORTHO05D002516 1.5e-20 103.2 124 51.6
MSTRG.22217 Avicennia marina HOM05D002412 ORTHO05D002516 5.0e-19 98.2 126 49.2
Cc10_g05040 Coffea canephora HOM05D002412 ORTHO05D002516 5.0e-19 98.2 135 47.4
MSTRG.24380 Avicennia marina HOM05D002412 ORTHO05D002516 9.4e-18 94.0 130 51.5
Oeu048571.1 Olea europaea HOM05D002412 ORTHO05D002516 1.6e-17 93.2 119 49.6
Dinv44944 Davidia involucrata HOM05D002412 ORTHO05D002516 2.1e-17 92.8 118 47.5
Cc00_g17020 Coffea canephora HOM05D002412 ORTHO05D002516 6.1e-17 91.3 129 46.5
PGSC0003DMG400010615 Solanum tuberosum HOM05D002412 ORTHO05D002516 1.4e-16 90.1 135 44.4
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 4.4e-15 85.1 136 46.3
Duzib093G1945 Durio zibethinus HOM05D002412 ORTHO05D002516 4.4e-15 85.1 133 46.6
Migut.C00481 Erythranthe guttata HOM05D062627 ORTHO05D002516 1.3e-14 83.6 126 45.2
PGSC0003DMG401011556 Solanum tuberosum HOM05D002412 ORTHO05D002516 1.3e-14 83.6 128 43.0
DCAR_012823 Daucus carota HOM05D002412 ORTHO05D002516 3.7e-14 82.0 125 47.2
Actinidia10209 Actinidia chinensis HOM05D002412 ORTHO05D002516 4.8e-14 81.6 130 43.8
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 4.8e-14 81.6 120 48.3
Solyc04g077690.3 Solanum lycopersicum HOM05D002412 ORTHO05D002516 6.3e-14 81.3 140 46.4
Solyc12g088300.2 Solanum lycopersicum HOM05D002412 ORTHO05D002516 6.3e-14 81.3 128 41.4
Sopen04g031330 Solanum pennellii HOM05D002412 ORTHO05D002516 8.2e-14 80.9 144 45.1
TPR.G8322 Trifolium pratense HOM05D002412 ORTHO05D002516 7.0e-13 77.8 125 36.8
Actinidia04390 Actinidia chinensis HOM05D002412 ORTHO05D002516 9.1e-13 77.4 127 42.5
Sopen12g030300 Solanum pennellii HOM05D002412 ORTHO05D002516 1.2e-12 77.0 128 40.6
Nitab4.5_0003953g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 1.6e-12 76.6 130 42.3
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 2.0e-12 76.3 137 43.1
unitig_578.g16152 Utricularia gibba HOM05D002412 ORTHO05D002516 2.0e-12 76.3 118 47.5
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 2.6e-12 75.9 140 40.7
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 2.6e-12 75.9 138 39.9
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 2.6e-12 75.9 131 43.5
Gohir.D02G088500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.5e-12 75.1 137 41.6
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 4.5e-12 75.1 130 41.5
MSTRG.1024 Avicennia marina HOM05D002412 ORTHO05D002516 5.9e-12 74.7 126 44.4
COL.COLO4_28483 Corchorus olitorius HOM05D002412 ORTHO05D002516 5.9e-12 74.7 129 43.4
Gorai.005G099200 Gossypium raimondii HOM05D002412 ORTHO05D002516 7.7e-12 74.3 137 41.6
unitig_8.g4872 Utricularia gibba HOM05D002412 ORTHO05D002516 1.3e-11 73.6 122 45.9
Glyma.14G089039 Glycine max HOM05D002412 ORTHO05D002516 3.8e-11 72.0 122 42.6
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 5.0e-11 71.6 129 39.5
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 6.5e-11 71.2 127 41.7
Gorai.010G026300 Gossypium raimondii HOM05D002412 ORTHO05D002516 6.5e-11 71.2 125 44.0
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 6.5e-11 71.2 130 40.0
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 8.5e-11 70.9 121 41.3
Rhsim06G0063100 Rhododendron simsii HOM05D002412 ORTHO05D002516 8.5e-11 70.9 118 43.2
Ciclev10029343m.g Citrus clementina HOM05D002412 ORTHO05D002516 1.1e-10 70.5 135 39.3
DCAR_009875 Daucus carota HOM05D002412 ORTHO05D002516 1.1e-10 70.5 132 42.4
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 1.1e-10 70.5 126 41.3
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 1.1e-10 70.5 138 40.6
Gohir.A05G210800 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.5e-10 70.1 138 37.7
Phvul.002G051300 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 1.5e-10 70.1 122 41.8
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 1.9e-10 69.7 113 48.7
Phvul.001G028800 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 1.9e-10 69.7 123 42.3
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 1.9e-10 69.7 130 43.1
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 2.5e-10 69.3 136 44.9
Peaxi162Scf00160g00517 Petunia axillaris HOM05D002412 ORTHO05D002516 2.5e-10 69.3 116 42.2
DCAR_020053 Daucus carota HOM05D002412 ORTHO05D002516 3.2e-10 68.9 131 41.2
VMungo0647G1017 Vigna mungo HOM05D002412 ORTHO05D002516 3.2e-10 68.9 123 41.5
CSS0003834 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 4.2e-10 68.6 130 38.5
Glyma.01G242100 Glycine max HOM05D002412 ORTHO05D002516 4.2e-10 68.6 121 38.8
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 4.2e-10 68.6 125 41.6
Glyma.17G234000 Glycine max HOM05D002412 ORTHO05D002516 4.2e-10 68.6 123 41.5
Gohir.A12G019300 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.2e-10 68.6 151 35.1
Lj5g0023078 Lotus japonicus HOM05D002412 ORTHO05D002516 4.2e-10 68.6 128 40.6
VMungo1215G2231 Vigna mungo HOM05D002412 ORTHO05D002516 5.5e-10 68.2 124 41.9
unitig_46.g17922 Utricularia gibba HOM05D001230 ORTHO05D001067 7.2e-10 67.8 124 42.7
Duzib052G0953 Durio zibethinus HOM05D002412 ORTHO05D002516 9.4e-10 67.4 142 41.5
Gohir.D06G021700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.2e-09 67.0 125 42.4
ECA246G2811 Erigeron canadensis HOM05D002412 ORTHO05D002516 1.6e-09 66.6 132 38.6
Gohir.A06G024600 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.6e-09 66.6 124 42.7
Gohir.D12G019500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.6e-09 66.6 151 35.1
Gorai.008G019800 Gossypium raimondii HOM05D002412 ORTHO05D002516 1.6e-09 66.6 151 35.1
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 1.6e-09 66.6 119 47.1
Ca_24361_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 2.1e-09 66.2 125 40.8
DCAR_019349 Daucus carota HOM05D001207 ORTHO05D009015 2.1e-09 66.2 125 42.4
Glyma.10G256100 Glycine max HOM05D002412 ORTHO05D002516 2.1e-09 66.2 140 39.3
Medtr1g106080 Medicago truncatula HOM05D002412 ORTHO05D002516 2.1e-09 66.2 130 36.9
vmacro19537 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 2.1e-09 66.2 126 40.5
DCAR_029176 Daucus carota HOM05D002412 ORTHO05D002516 2.7e-09 65.9 116 38.8
ECA236G2487 Erigeron canadensis HOM05D002412 ORTHO05D002516 2.7e-09 65.9 121 39.7
Psat4g227320 Pisum sativum HOM05D002412 ORTHO05D002516 2.7e-09 65.9 126 37.3
TPR.G13172 Trifolium pratense HOM05D002412 ORTHO05D002516 2.7e-09 65.9 125 40.8
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 3.6e-09 65.5 134 38.1
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 3.6e-09 65.5 125 39.2
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 3.6e-09 65.5 123 39.8
PSO017G0848 Papaver somniferum HOM05D002412 ORTHO05D002516 3.6e-09 65.5 132 40.9
Phvul.007G046700 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 4.7e-09 65.1 130 38.5
vmacro01953 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 4.7e-09 65.1 131 36.6
Ciclev10002703m.g Citrus clementina HOM05D002412 ORTHO05D002516 6.1e-09 64.7 148 37.2
Dinv15818 Davidia involucrata HOM05D002412 ORTHO05D002516 6.1e-09 64.7 124 41.1
TPR.G21149 Trifolium pratense HOM05D002412 ORTHO05D002516 6.1e-09 64.7 127 40.9
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 6.1e-09 64.7 132 41.7
TAR628G0919 Trochodendron aralioides HOM05D002412 ORTHO05D002516 8.0e-09 64.3 126 38.9
CSS0009619 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 1.0e-08 63.9 125 39.2
Sopen01g049190 Solanum pennellii HOM05D002412 ORTHO05D002516 1.0e-08 63.9 122 41.0
Actinidia00360 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.4e-08 63.5 133 39.8
Ah.01g007050 Amaranthus hybridus HOM05D002412 ORTHO05D002516 1.4e-08 63.5 149 36.2
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 1.4e-08 63.5 122 40.2
Rhsim05G0091500 Rhododendron simsii HOM05D002412 ORTHO05D002516 1.4e-08 63.5 127 40.2
Psat0ss7070g0040 Pisum sativum HOM05D002412 ORTHO05D002516 1.8e-08 63.2 124 40.3
QL93p0154_0003 Quercus lobata HOM05D002412 ORTHO05D002516 1.8e-08 63.2 136 40.4
Hma1.2p1_1059F.1_g253110 Hydrangea macrophylla HOM05D002412 ORTHO05D002516 2.3e-08 62.8 123 39.0
Medtr5g005230 Medicago truncatula HOM05D002412 ORTHO05D002516 2.3e-08 62.8 67 47.8
Psat6g017720 Pisum sativum HOM05D002412 ORTHO05D002516 2.3e-08 62.8 127 40.2
SalBow2G3451 Salvia bowleyana HOM05D002412 ORTHO05D002516 2.3e-08 62.8 118 39.8
Sed0022600 Sechium edule HOM05D002412 ORTHO05D002516 4.0e-08 62.0 131 38.2
Nitab4.5_0001458g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 5.2e-08 61.6 126 42.9
unitig_744.g24125 Utricularia gibba HOM05D002412 ORTHO05D002516 5.2e-08 61.6 136 40.4
Lalb_Chr02g0144931 Lupinus albus HOM05D002412 ORTHO05D002516 6.7e-08 61.2 128 40.6
FAN15G1065 Fragaria x ananassa HOM05D002412 ORTHO05D002516 8.8e-08 60.8 131 39.7
Medtr1g017890 Medicago truncatula HOM05D002412 ORTHO05D002516 8.8e-08 60.8 128 38.3
PSO170G3219 Papaver somniferum HOM05D002412 ORTHO05D002516 8.8e-08 60.8 132 40.2
HanXRQChr03g0065031 Helianthus annuus HOM05D002412 ORTHO05D002516 1.2e-07 60.5 116 36.2
Lj1g0009349 Lotus japonicus HOM05D002412 ORTHO05D002516 1.2e-07 60.5 127 36.2
QL11p029982 Quercus lobata HOM05D002412 ORTHO05D002516 1.2e-07 60.5 143 37.1
MSTRG.20224 Avicennia marina HOM05D002412 ORTHO05D002516 1.5e-07 60.1 146 35.6
FAN20G2155 Fragaria x ananassa HOM05D002412 ORTHO05D002516 1.5e-07 60.1 135 37.8
Psat6g214680 Pisum sativum HOM05D002412 ORTHO05D002516 1.5e-07 60.1 131 38.2
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 1.5e-07 60.1 113 43.4
MELO3C016826.2 Cucumis melo HOM05D002412 ORTHO05D002516 2.0e-07 59.7 123 36.6
unitig_21.g20629 Utricularia gibba HOM05D002412 ORTHO05D002516 2.0e-07 59.7 129 42.6
Prupe.8G147000 Prunus persica HOM05D002412 ORTHO05D002516 2.6e-07 59.3 150 34.7
CAN.G606.66 Capsicum annuum HOM05D002412 ORTHO05D002516 3.3e-07 58.9 127 41.7
CiPaw.08G050800 Carya illinoinensis HOM05D002412 ORTHO05D002516 3.3e-07 58.9 132 34.8
MD15G1067500 Malus domestica HOM05D002412 ORTHO05D002516 3.3e-07 58.9 131 38.2
QL12p038263 Quercus lobata HOM05D002412 ORTHO05D002516 3.3e-07 58.9 133 39.1
DCAR_001741 Daucus carota HOM05D002412 ORTHO05D002516 4.4e-07 58.5 126 35.7
Eucgr.I01046 Eucalyptus grandis HOM05D002412 ORTHO05D002516 4.4e-07 58.5 139 36.0
Nn5g30629 Nelumbo nucifera HOM05D002412 ORTHO05D002516 4.4e-07 58.5 142 38.0
RhsimUnG0041400 Rhododendron simsii HOM05D002412 ORTHO05D002516 4.4e-07 58.5 127 37.0
RhsimUnG0123400 Rhododendron simsii HOM05D002412 ORTHO05D002516 4.4e-07 58.5 127 37.0
THA.LOC104807210 Tarenaya hassleriana HOM05D002412 ORTHO05D002516 4.4e-07 58.5 133 38.3
CAN.G975.16 Capsicum annuum HOM05D002412 ORTHO05D002516 5.7e-07 58.2 124 37.1
SalBow6G4199 Salvia bowleyana HOM05D002412 ORTHO05D002516 5.7e-07 58.2 127 37.8
Haze_10271 Corylus avellana HOM05D002412 ORTHO05D002516 7.5e-07 57.8 134 35.1
CsaV3_4G035130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 9.7e-07 57.4 132 36.4
Sc02g0007970 Simmondsia chinensis HOM05D002412 ORTHO05D002516 9.7e-07 57.4 120 39.2
Atru.chr13.848 Acer truncatum HOM05D002412 ORTHO05D002516 1.3e-06 57.0 141 39.0
Actinidia34355 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.3e-06 57.0 128 36.7
Sabra16G0182100 Salix brachista HOM05D002412 ORTHO05D002516 1.3e-06 57.0 143 36.4
Sc15g0005620 Simmondsia chinensis HOM05D002412 ORTHO05D002516 1.3e-06 57.0 123 35.0
Thecc.02G118800 Theobroma cacao HOM05D002412 ORTHO05D002516 1.7e-06 56.6 139 34.5
TPR.G33675 Trifolium pratense HOM05D002412 ORTHO05D002516 1.7e-06 56.6 129 38.0
VMungo0720G0862 Vigna mungo HOM05D002412 ORTHO05D002516 1.7e-06 56.6 133 35.3
BcaNung04670 Brassica carinata HOM05D002412 ORTHO05D002516 2.2e-06 56.2 129 37.2
MELO3C018019.2 Cucumis melo HOM05D002412 ORTHO05D002516 2.2e-06 56.2 137 35.8
Glyma.20G135500 Glycine max HOM05D002412 ORTHO05D002516 2.2e-06 56.2 148 38.5
Sabra09G0066300 Salix brachista HOM05D002412 ORTHO05D002516 2.2e-06 56.2 144 32.6
EL10Ac1g02365 Beta vulgaris HOM05D002412 ORTHO05D002516 2.8e-06 55.8 143 33.6
ClCG05G020680 Citrullus lanatus HOM05D002412 ORTHO05D002516 2.8e-06 55.8 131 35.9
Lalb_Chr06g0165021 Lupinus albus HOM05D002412 ORTHO05D002516 2.8e-06 55.8 134 35.8
CsaV3_4G000130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 3.7e-06 55.5 137 35.8
Lalb_Chr11g0062941 Lupinus albus HOM05D002412 ORTHO05D002516 3.7e-06 55.5 118 38.1
TWI12G0333 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 4.8e-06 55.1 128 35.2
Ca_11030_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 6.3e-06 54.7 142 35.9
Nitab4.5_0007781g0010 Nicotiana tabacum HOM05D002412 ORTHO05D002516 6.3e-06 54.7 129 36.4
Peaxi162Scf00003g00288 Petunia axillaris HOM05D002412 ORTHO05D002516 6.3e-06 54.7 130 32.3
CANSAT25G2021 Cannabis sativa HOM05D002412 ORTHO05D002516 8.2e-06 54.3 149 32.2
CsaV3_2G026020 Cucumis sativus L. HOM05D002412 ORTHO05D002516 8.2e-06 54.3 123 35.8
Potri.001G292100 Populus trichocarpa HOM05D002412 ORTHO05D002516 8.2e-06 54.3 154 30.5
Solyc01g106910.4 Solanum lycopersicum HOM05D002412 ORTHO05D002516 8.2e-06 54.3 125 39.2


User provided reference genes

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