Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053524.1 Olea europaea HOM05D000028 ORTHO05D287128 1.7e-48 195.7 96 100.0
FAN04G2799 Fragaria x ananassa HOM05D001768 ORTHO05D001907 2.6e-09 65.5 52 57.7
FAN08G0057 Fragaria x ananassa HOM05D000028 ORTHO05D001176 2.6e-09 65.5 52 57.7
FAN18G2856 Fragaria x ananassa HOM05D000028 ORTHO05D001176 2.6e-09 65.5 52 57.7
GSVIVG01019715001 Vitis vinifera HOM05D000028 ORTHO05D001176 2.6e-09 65.5 53 52.8
Ciclev10023533m.g Citrus clementina HOM05D000028 ORTHO05D001176 3.4e-09 65.1 52 59.6
FvH4_5g10220 Fragaria vesca HOM05D000028 ORTHO05D001176 3.4e-09 65.1 52 57.7
GSVIVG01019714001 Vitis vinifera HOM05D000028 ORTHO05D001176 3.4e-09 65.1 53 52.8
FAN13G1364 Fragaria x ananassa HOM05D000028 ORTHO05D001176 4.4e-09 64.7 52 57.7
RcHm_v2.0_Chr7g0188001 Rosa chinensis HOM05D000028 ORTHO05D001176 5.8e-09 64.3 52 57.7
Sabra11G0133800 Salix brachista HOM05D000028 ORTHO05D001176 7.6e-09 63.9 53 52.8
CiPaw.11G107500 Carya illinoinensis HOM05D000028 ORTHO05D001176 9.9e-09 63.5 51 56.9
Atru.chr9.1822 Acer truncatum HOM05D000028 ORTHO05D001176 1.7e-08 62.8 52 51.9
Dinv05462 Davidia involucrata HOM05D000028 ORTHO05D001176 1.7e-08 62.8 48 60.4
Dinv12392 Davidia involucrata HOM05D000028 ORTHO05D001176 1.7e-08 62.8 48 60.4
Sabra11G0133500 Salix brachista HOM05D000028 ORTHO05D001176 1.7e-08 62.8 53 52.8
TAR463G0003 Trochodendron aralioides HOM05D000028 ORTHO05D001176 1.7e-08 62.8 48 62.5
Lj2C148T21 Lonicera japonica HOM05D000028 ORTHO05D001176 2.2e-08 62.4 51 52.9
Potri.011G148400 Populus trichocarpa HOM05D000028 ORTHO05D001176 4.9e-08 61.2 53 52.8
RcHm_v2.0_Chr7g0188011 Rosa chinensis HOM05D000028 ORTHO05D001176 4.9e-08 61.2 52 57.7
MD14G1142400 Malus domestica HOM05D000028 ORTHO05D001176 6.4e-08 60.8 54 50.0
Manes.01G000600 Manihot esculenta HOM05D000028 ORTHO05D001176 8.4e-08 60.5 52 50.0
QL02p026770 Quercus lobata HOM05D000028 ORTHO05D001176 1.1e-07 60.1 51 52.9
QL02p026865 Quercus lobata HOM05D000028 ORTHO05D001176 1.1e-07 60.1 51 52.9
MD06G1127200 Malus domestica HOM05D000028 ORTHO05D001176 3.2e-07 58.5 61 49.2
Ciclev10020812m.g Citrus clementina HOM05D000028 ORTHO05D001176 4.2e-07 58.2 50 48.0
Duzib084G1415 Durio zibethinus HOM05D000028 ORTHO05D001176 4.2e-07 58.2 52 50.0
Haze_09228 Corylus avellana HOM05D000028 ORTHO05D001176 9.3e-07 57.0 51 49.0
GSVIVG01019713001 Vitis vinifera HOM05D000028 ORTHO05D001176 9.3e-07 57.0 53 47.2
COL.COLO4_10858 Corchorus olitorius HOM05D000028 ORTHO05D001176 1.2e-06 56.6 49 51.0
Prupe.5G136500 Prunus persica HOM05D000028 ORTHO05D001176 2.1e-06 55.8 48 52.1
Duzib205G1359 Durio zibethinus HOM05D000028 ORTHO05D001176 2.7e-06 55.5 53 49.1
Eucgr.D02532 Eucalyptus grandis HOM05D000028 ORTHO05D001176 2.7e-06 55.5 51 49.0
TWI81G0115 Tripterygium wilfordii HOM05D000028 ORTHO05D001176 2.7e-06 55.5 51 47.1
Cfa011877 Carpinus fangiana HOM05D000028 ORTHO05D001176 3.5e-06 55.1 46 54.3
Eucgr.D02535 Eucalyptus grandis HOM05D000028 ORTHO05D001176 3.5e-06 55.1 51 47.1
PGR031G1337 Punica granatum HOM05D000028 ORTHO05D001176 3.5e-06 55.1 52 48.1
Sed0025806 Sechium edule HOM05D000028 ORTHO05D001176 3.5e-06 55.1 60 41.7
FAN13G3164 Fragaria x ananassa HOM05D000028 ORTHO05D001176 4.6e-06 54.7 52 53.8
Prupe.4G100300 Prunus persica HOM05D000028 ORTHO05D001176 4.6e-06 54.7 48 52.1
FvH4_5g10210 Fragaria vesca HOM05D000028 ORTHO05D001176 6.0e-06 54.3 52 53.8
Thecc.03G214400 Theobroma cacao HOM05D000028 ORTHO05D001176 6.0e-06 54.3 51 47.1


User provided reference genes

Program Settings