Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053414.1 Olea europaea HOM05D004903 ORTHO05D005849 1.0e-134 483.4 239 100.0
Oeu019513.1 Olea europaea HOM05D004903 ORTHO05D005849 1.7e-94 349.7 190 90.0
MSTRG.10905 Avicennia marina HOM05D004903 ORTHO05D005849 4.0e-83 312.0 237 65.8
Migut.I01143 Erythranthe guttata HOM05D004903 ORTHO05D005849 4.0e-83 312.0 233 66.5
SalBow6G3230 Salvia bowleyana HOM05D004903 ORTHO05D005849 3.7e-81 305.4 233 65.2
Nitab4.5_0006190g0020 Nicotiana tabacum HOM05D004903 ORTHO05D005849 7.0e-80 301.2 233 64.4
Peaxi162Scf00207g01534 Petunia axillaris HOM05D004903 ORTHO05D005849 9.2e-80 300.8 233 63.9
Dinv20374 Davidia involucrata HOM05D004903 ORTHO05D005849 1.3e-78 297.0 234 62.8
CAN.G1633.2 Capsicum annuum HOM05D004903 ORTHO05D005849 6.6e-78 294.7 234 64.5
Rhsim08G0245600 Rhododendron simsii HOM05D004903 ORTHO05D005849 1.9e-77 293.1 236 61.0
CSS0022789 Camellia sinensis var. sinensis HOM05D004903 ORTHO05D005849 1.2e-76 290.4 234 62.0
PGSC0003DMG400004869 Solanum tuberosum HOM05D004903 ORTHO05D005849 3.6e-76 288.9 233 60.9
HanXRQChr12g0360041 Helianthus annuus HOM05D004903 ORTHO05D005849 8.0e-76 287.7 220 63.2
Lsat_1_v5_gn_5_137641 Lactuca sativa HOM05D004903 ORTHO05D005849 5.2e-75 285.0 221 65.2
Actinidia25997 Actinidia chinensis HOM05D004903 ORTHO05D005849 8.9e-75 284.3 233 60.1
TAR624G0709 Trochodendron aralioides HOM05D004903 ORTHO05D005849 4.4e-74 282.0 236 60.2
Sopen06g022580 Solanum pennellii HOM05D004903 ORTHO05D005849 9.8e-74 280.8 233 58.8
Solyc06g063130.3 Solanum lycopersicum HOM05D004903 ORTHO05D005849 1.3e-73 280.4 233 58.4
Actinidia24416 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.7e-73 280.0 241 58.1
Nitab4.5_0010570g0050 Nicotiana tabacum HOM05D004903 ORTHO05D005849 6.4e-73 278.1 220 62.3
CsaV3_7G033900 Cucumis sativus L. HOM05D004903 ORTHO05D005849 3.2e-72 275.8 218 62.4
FvH4_6g36070 Fragaria vesca HOM05D004903 ORTHO05D005849 3.2e-72 275.8 240 58.3
Duzib160G0805 Durio zibethinus HOM05D004903 ORTHO05D005849 4.1e-72 275.4 234 59.4
FAN14G0435 Fragaria x ananassa HOM05D004903 ORTHO05D005849 4.1e-72 275.4 238 59.7
COL.COLO4_30880 Corchorus olitorius HOM05D004903 ORTHO05D005849 7.0e-72 274.6 233 60.5
Thecc.06G131400 Theobroma cacao HOM05D004903 ORTHO05D005849 7.0e-72 274.6 234 60.3
FAN02G0327 Fragaria x ananassa HOM05D004903 ORTHO05D005849 9.2e-72 274.2 238 59.2
SGA_v2.0_scaffold71G23946 Striga asiatica HOM05D004903 ORTHO05D005849 1.6e-71 273.5 237 61.6
QL05p000751 Quercus lobata HOM05D004903 ORTHO05D005849 2.0e-71 273.1 237 60.3
FAN14G1686 Fragaria x ananassa HOM05D004903 ORTHO05D005849 4.6e-71 271.9 242 58.3
Manes.11G011500 Manihot esculenta HOM05D004903 ORTHO05D005849 4.6e-71 271.9 205 65.9
QL05p000658 Quercus lobata HOM05D004903 ORTHO05D005849 4.6e-71 271.9 237 59.5
FAN09G2808 Fragaria x ananassa HOM05D004903 ORTHO05D005849 7.8e-71 271.2 242 58.3
Potri.001G161800 Populus trichocarpa HOM05D004903 ORTHO05D005849 7.8e-71 271.2 234 59.4
DCAR_022636 Daucus carota HOM05D004903 ORTHO05D005849 1.0e-70 270.8 240 57.5
ClCG09G001430 Citrullus lanatus HOM05D004903 ORTHO05D005849 1.3e-70 270.4 218 62.8
unitig_32.g11002 Utricularia gibba HOM05D004903 ORTHO05D005849 1.3e-70 270.4 227 59.5
CiPaw.01G210600 Carya illinoinensis HOM05D004903 ORTHO05D005849 1.7e-70 270.0 238 58.8
RcHm_v2.0_Chr2g0148141 Rosa chinensis HOM05D004903 ORTHO05D005849 2.3e-70 269.6 242 57.4
GSVIVG01016657001 Vitis vinifera HOM05D004903 ORTHO05D005849 3.0e-70 269.2 233 57.9
Gohir.D06G202400 Gossypium hirsutum HOM05D004903 ORTHO05D005849 5.0e-70 268.5 209 64.1
Gorai.010G236300 Gossypium raimondii HOM05D004903 ORTHO05D005849 5.0e-70 268.5 209 64.1
Cc04_g00600 Coffea canephora HOM05D004903 ORTHO05D005849 6.6e-70 268.1 241 58.9
Sc12g0011010 Simmondsia chinensis HOM05D004903 ORTHO05D005849 6.6e-70 268.1 232 58.2
Prupe.3G030200 Prunus persica HOM05D004903 ORTHO05D005849 1.9e-69 266.5 234 58.5
Ciclev10026250m.g Citrus clementina HOM05D004903 ORTHO05D005849 4.3e-69 265.4 233 59.7
Gorai.010G172600 Gossypium raimondii HOM05D004903 ORTHO05D005849 4.3e-69 265.4 234 58.5
THA.LOC104810400 Tarenaya hassleriana HOM05D004903 ORTHO05D005849 5.6e-69 265.0 222 59.5
Atru.chr1.4170 Acer truncatum HOM05D004903 ORTHO05D005849 9.5e-69 264.2 234 58.1
AUR62001391 Chenopodium quinoa HOM05D004903 ORTHO05D005849 1.6e-68 263.5 228 59.6
MD09G1171800 Malus domestica HOM05D004903 ORTHO05D005849 2.1e-68 263.1 237 56.5
Hund18627 Selenicereus undatus HOM05D004903 ORTHO05D005849 3.6e-68 262.3 234 57.3
Gohir.A06G142500 Gossypium hirsutum HOM05D004903 ORTHO05D005849 4.7e-68 261.9 234 57.7
Ca_23466_v3 Cicer arietinum L. HOM05D004903 ORTHO05D005849 1.8e-67 260.0 240 55.4
CANSAT56G0172 Cannabis sativa HOM05D004903 ORTHO05D005849 5.2e-67 258.5 236 56.8
Glyma.07G046600 Glycine max HOM05D004903 ORTHO05D005849 6.8e-67 258.1 234 57.7
Gohir.A06G194700 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.5e-66 256.9 201 64.2
EL10Ac7g18248 Beta vulgaris HOM05D004903 ORTHO05D005849 3.4e-66 255.8 201 63.2
AT1G53760 Arabidopsis thaliana HOM05D004903 ORTHO05D005849 4.4e-66 255.4 201 62.2
Glyma.16G015600 Glycine max HOM05D004903 ORTHO05D005849 4.4e-66 255.4 236 54.2
Aqoxy7G00919 Aquilegia oxysepala HOM05D004903 ORTHO05D005849 5.8e-66 255.0 246 57.3
MELO3C024303.2 Cucumis melo HOM05D004903 ORTHO05D005849 5.8e-66 255.0 191 64.9
MD17G1155200 Malus domestica HOM05D004903 ORTHO05D005849 5.8e-66 255.0 237 55.3
PSO135G0609 Papaver somniferum HOM05D004903 ORTHO05D005849 5.8e-66 255.0 234 55.6
Nn8g38503 Nelumbo nucifera HOM05D004903 ORTHO05D005849 7.5e-66 254.6 233 57.5
AL1G62450 Arabidopsis lyrata HOM05D004903 ORTHO05D005849 9.8e-66 254.2 200 62.0
BcaC08g44129 Brassica carinata HOM05D004903 ORTHO05D005849 1.3e-65 253.8 209 60.3
BolC6t36703H Brassica oleracea HOM05D004903 ORTHO05D005849 1.3e-65 253.8 209 60.3
PSO724G0850 Papaver somniferum HOM05D004903 ORTHO05D005849 1.3e-65 253.8 234 55.6
A05p17920 Brassica napus HOM05D004903 ORTHO05D005849 1.7e-65 253.4 204 61.3
C06p15280 Brassica napus HOM05D004903 ORTHO05D005849 1.7e-65 253.4 209 60.3
Lj3g0025901 Lotus japonicus HOM05D004903 ORTHO05D005849 1.7e-65 253.4 234 56.0
Carub.0001s4303 Capsella rubella HOM05D004903 ORTHO05D005849 2.2e-65 253.1 199 61.8
CARHR044070 Cardamine hirsuta HOM05D004903 ORTHO05D005849 2.2e-65 253.1 226 57.1
vmacro18714 Vaccinium macrocarpon HOM05D004903 ORTHO05D005849 2.9e-65 252.7 234 55.6
Cpa.g.sc25.203 Carica papaya HOM05D004903 ORTHO05D005849 3.7e-65 252.3 190 66.8
BraA05t20686Z Brassica rapa HOM05D004903 ORTHO05D005849 4.9e-65 251.9 204 60.8
Thhalv10011709m.g Eutrema salsugineum HOM05D004903 ORTHO05D005849 4.9e-65 251.9 202 60.9
Lj5A28T47 Lonicera japonica HOM05D004903 ORTHO05D005849 4.9e-65 251.9 186 65.6
Sp1g40280 Schrenkiella parvula HOM05D004903 ORTHO05D005849 6.4e-65 251.5 199 61.3
Aa31LG10G1530 Aethionema arabicum HOM05D000070 ORTHO05D003301 8.3e-65 251.1 220 57.3
Gorai.011G054300 Gossypium raimondii HOM05D004903 ORTHO05D005849 8.3e-65 251.1 227 57.3
arahy.Tifrunner.gnm1.ann1.97GHXX Arachis hypogaea HOM05D004903 ORTHO05D005849 1.4e-64 250.4 230 54.3
BcaB02g10893 Brassica carinata HOM05D004903 ORTHO05D005849 1.4e-64 250.4 230 55.2
C06p09540 Brassica napus HOM05D004903 ORTHO05D005849 1.9e-64 250.0 233 54.9
BolC6t36028H Brassica oleracea HOM05D004903 ORTHO05D005849 1.9e-64 250.0 233 54.9
Eucgr.J02586 Eucalyptus grandis HOM05D004903 ORTHO05D005849 2.4e-64 249.6 235 53.2
TWI59G0350 Tripterygium wilfordii HOM05D004903 ORTHO05D005849 2.4e-64 249.6 207 59.4
BcaC08g43554 Brassica carinata HOM05D004903 ORTHO05D005849 3.2e-64 249.2 233 54.5
Medtr8g023500 Medicago truncatula HOM05D004903 ORTHO05D005849 5.4e-64 248.4 245 54.3
TPR.G15248 Trifolium pratense HOM05D004903 ORTHO05D005849 5.4e-64 248.4 236 55.5
A06p00790 Brassica napus HOM05D004903 ORTHO05D005849 7.0e-64 248.1 231 55.0
BcaB07g33303 Brassica carinata HOM05D004903 ORTHO05D005849 9.2e-64 247.7 233 53.2
BraA06t23313Z Brassica rapa HOM05D004903 ORTHO05D005849 9.2e-64 247.7 231 55.0
Lalb_Chr17g0343171 Lupinus albus HOM05D004903 ORTHO05D005849 1.2e-63 247.3 234 53.4
Phvul.010G122300 Phaseolus vulgaris HOM05D004903 ORTHO05D005849 2.0e-63 246.5 220 59.5
VMungo0331G0875 Vigna mungo HOM05D004903 ORTHO05D005849 2.0e-63 246.5 221 56.6
Sed0027894 Sechium edule HOM05D004903 ORTHO05D005849 2.7e-63 246.1 222 57.2
Hma1.2p1_1999F.1_g310500 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 3.5e-63 245.7 189 61.9
arahy.Tifrunner.gnm1.ann1.AA2XIP Arachis hypogaea HOM05D004903 ORTHO05D005849 1.1e-61 240.7 226 53.1
Psat4g164720 Pisum sativum HOM05D004903 ORTHO05D005849 2.5e-61 239.6 228 55.7
Sabra03G0044200 Salix brachista HOM05D004903 ORTHO05D005849 1.2e-60 237.3 236 54.2
arahy.Tifrunner.gnm1.ann1.3XU7EE Arachis hypogaea HOM05D004903 ORTHO05D005849 2.8e-60 236.1 231 51.1
arahy.Tifrunner.gnm1.ann1.M9BVNS Arachis hypogaea HOM05D004903 ORTHO05D005849 2.8e-60 236.1 232 51.3
HPP92_000828 Vanilla planifolia HOM05D004903 ORTHO05D005849 1.1e-59 234.2 199 59.8
arahy.Tifrunner.gnm1.ann1.HDKQ14 Arachis hypogaea HOM05D004903 ORTHO05D005849 5.2e-59 231.9 237 51.1
MBI17_g12875_MAGBIO Magnolia biondii HOM05D004903 ORTHO05D005849 5.2e-59 231.9 198 57.6
ATR0006G080 Amborella trichopoda HOM05D004903 ORTHO05D005849 6.8e-59 231.5 235 52.8
CDE06G0378 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 9.9e-58 227.6 234 51.3
Zm00001eb207930 Zea mays HOM05D004903 ORTHO05D005849 6.4e-57 224.9 235 49.4
Os02g0152600 Oryza sativa ssp. japonica HOM05D004903 ORTHO05D005849 8.3e-57 224.6 240 49.6
arahy.Tifrunner.gnm1.ann1.ZQ2A8X Arachis hypogaea HOM05D004903 ORTHO05D005849 1.9e-56 223.4 251 47.4
CDE04G1042 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.6e-55 220.3 233 51.1
ECA234G0009 Erigeron canadensis HOM05D004903 ORTHO05D005849 2.1e-55 219.9 176 60.8
arahy.Tifrunner.gnm1.ann1.5Z4EMJ Arachis hypogaea HOM05D004903 ORTHO05D005849 6.0e-55 218.4 213 50.7
AUR62025608 Chenopodium quinoa HOM05D004903 ORTHO05D005849 5.1e-54 215.3 201 56.2
Sabra01G0130700 Salix brachista HOM05D004903 ORTHO05D005849 2.5e-53 213.0 228 52.6
Dinv37814 Davidia involucrata HOM05D004903 ORTHO05D005849 4.3e-53 212.2 164 62.8
Gohir.A10G050050 Gossypium hirsutum HOM05D004903 ORTHO05D005849 4.3e-53 212.2 251 49.0
Cfa003452 Carpinus fangiana HOM05D004903 ORTHO05D005849 1.1e-51 207.6 163 62.6
Sed0021101 Sechium edule HOM05D004903 ORTHO05D005849 3.8e-49 199.1 157 61.8
Hma1.2p1_0090F.1_g045680 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 6.0e-47 191.8 164 55.5
Gohir.D10G050650 Gossypium hirsutum HOM05D004903 ORTHO05D005849 2.1e-44 183.3 163 57.1
Actinidia31143 Actinidia chinensis HOM05D004903 ORTHO05D005849 3.4e-42 176.0 184 51.6
Mapoly0021s0048 Marchantia polymorpha HOM05D004903 ORTHO05D005849 3.5e-39 166.0 227 41.0
AagrBONN_evm.TU.Sc2ySwM_228.2429 Anthoceros agrestis HOM05D004903 ORTHO05D005849 4.3e-37 159.1 175 43.4
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.9e-32 143.7 220 40.9
Gohir.D06G148232 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.8e-30 137.1 115 60.0
CBR_g34164 Chara braunii HOM05D004903 ORTHO05D005849 1.1e-29 134.4 244 34.8
BcaB07g32153 Brassica carinata HOM05D004903 ORTHO05D005849 2.4e-27 126.7 123 56.1
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 3.1e-27 126.3 115 59.1
Pp3c13_9790 Physcomitrium patens HOM05D004903 ORTHO05D005849 2.6e-26 123.2 160 39.4
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 9.9e-26 121.3 94 58.5
arahy.Tifrunner.gnm1.ann1.AT31DH Arachis hypogaea HOM05D004903 ORTHO05D005849 1.3e-25 120.9 94 56.4
Haze_16148 Corylus avellana HOM05D003205 ORTHO05D003746 1.3e-20 104.4 148 41.2
Haze_16144 Corylus avellana HOM05D003205 ORTHO05D003746 3.7e-20 102.8 148 40.5
CDE06G0441 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 2.6e-18 96.7 87 56.3
Gohir.D02G109866 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.0e-17 94.7 87 55.2
SEGI_28585 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 1.9e-16 90.5 123 39.8
SEGI_38260 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 1.9e-16 90.5 123 39.8
Hma1.2p1_0090F.1_g045690 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 7.9e-15 85.1 71 59.2
PRCOL_00005128 Prasinoderma coloniale HOM05D004903 ORTHO05D005849 2.2e-12 77.0 211 31.3
Cre08.g358557 Chlamydomonas reinhardtii HOM05D004903 ORTHO05D005849 3.7e-12 76.3 197 24.9
TPR.G26438 Trifolium pratense HOM05D004903 ORTHO05D005849 1.5e-10 70.9 76 51.3
Actinidia21845 Actinidia chinensis HOM05D004903 ORTHO05D005849 2.5e-08 63.5 47 59.6
arahy.Tifrunner.gnm1.ann1.1E2DFU Arachis hypogaea HOM05D001485 ORTHO05D005849 1.0e-06 58.2 66 50.0
MCO07G235 Micromonas commoda HOM05D004903 ORTHO05D005849 1.4e-06 57.8 108 30.6
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 3.9e-06 56.2 56 51.8


User provided reference genes

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