Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053232.1 Olea europaea HOM05D003819 ORTHO05D005291 1.4e-259 899.0 442 100.0
Oeu058996.1 Olea europaea HOM05D003819 ORTHO05D005291 2.9e-119 433.0 421 58.9
Nitab4.5_0000249g0240 Nicotiana tabacum HOM05D003819 ORTHO05D005291 9.5e-107 391.3 423 51.1
Migut.M00265 Erythranthe guttata HOM05D003819 ORTHO05D005291 1.8e-105 387.1 413 52.5
Solyc12g010900.1 Solanum lycopersicum HOM05D003819 ORTHO05D005291 4.4e-104 382.5 426 50.0
Sopen12g006260 Solanum pennellii HOM05D003819 ORTHO05D005291 4.4e-104 382.5 426 50.0
PGSC0003DMG400035320 Solanum tuberosum HOM05D003819 ORTHO05D005291 2.2e-103 380.2 415 50.8
Nitab4.5_0006875g0030 Nicotiana tabacum HOM05D003819 ORTHO05D005291 2.9e-103 379.8 421 49.9
Nitab4.5_0013227g0010 Nicotiana tabacum HOM05D003819 ORTHO05D005291 1.6e-101 374.0 429 49.7
PGSC0003DMG400007856 Solanum tuberosum HOM05D003819 ORTHO05D005291 1.6e-101 374.0 422 49.8
Sopen07g027110 Solanum pennellii HOM05D003819 ORTHO05D005291 2.1e-101 373.6 414 50.5
SGA_v2.0_scaffold9G04831 Striga asiatica HOM05D003819 ORTHO05D005291 7.8e-101 371.7 416 49.3
MSTRG.15087 Avicennia marina HOM05D003819 ORTHO05D005291 5.1e-100 369.0 407 50.6
CAN.G1148.8 Capsicum annuum HOM05D003819 ORTHO05D005291 2.5e-99 366.7 420 48.8
SalBow7G4473 Salvia bowleyana HOM05D003819 ORTHO05D005291 1.8e-97 360.5 416 48.8
CSS0043691 Camellia sinensis var. sinensis HOM05D003819 ORTHO05D005291 1.4e-94 350.9 407 48.4
Cc00_g28410 Coffea canephora HOM05D003819 ORTHO05D005291 2.4e-94 350.1 417 49.2
Lsat_1_v5_gn_8_141221 Lactuca sativa HOM05D003819 ORTHO05D005291 2.1e-93 347.1 417 45.1
Cc05_g08390 Coffea canephora HOM05D003819 ORTHO05D005291 1.7e-92 344.0 417 48.4
Actinidia11157 Actinidia chinensis HOM05D003819 ORTHO05D005291 8.7e-92 341.7 410 48.0
unitig_85.g27373 Utricularia gibba HOM05D003819 ORTHO05D005291 2.8e-90 336.7 406 46.8
ECA233G0398 Erigeron canadensis HOM05D003819 ORTHO05D005291 9.0e-89 331.6 420 43.6
HanXRQChr17g0558991 Helianthus annuus HOM05D003819 ORTHO05D005291 9.9e-88 328.2 411 44.5
TAR629G3160 Trochodendron aralioides HOM05D003819 ORTHO05D005291 1.7e-87 327.4 417 44.8
ClCG07G002740 Citrullus lanatus HOM05D003819 ORTHO05D005291 8.4e-87 325.1 419 44.4
DCAR_021294 Daucus carota HOM05D003819 ORTHO05D005291 1.1e-86 324.7 415 44.8
MELO3C018720.2 Cucumis melo HOM05D003819 ORTHO05D005291 1.9e-86 323.9 412 45.1
Lj1P684T13 Lonicera japonica HOM05D003819 ORTHO05D005291 9.3e-86 321.6 414 46.1
GSVIVG01020711001 Vitis vinifera HOM05D003819 ORTHO05D005291 2.1e-85 320.5 414 44.7
CsaV3_7G005710 Cucumis sativus L. HOM05D003819 ORTHO05D005291 2.7e-85 320.1 412 44.4
Atru.chr6.2788 Acer truncatum HOM05D003819 ORTHO05D005291 1.0e-84 318.2 416 45.7
Peaxi162Scf00384g00211 Petunia axillaris HOM05D003819 ORTHO05D005291 2.3e-84 317.0 419 45.8
COL.COLO4_33586 Corchorus olitorius HOM05D003819 ORTHO05D005291 6.6e-84 315.5 414 43.2
Rhsim06G0130800 Rhododendron simsii HOM05D003819 ORTHO05D005291 2.5e-83 313.5 417 43.4
Manes.17G056400 Manihot esculenta HOM05D003819 ORTHO05D005291 4.3e-83 312.8 416 44.2
PSO675G1769 Papaver somniferum HOM05D003819 ORTHO05D005291 4.3e-83 312.8 407 44.5
QL08p041841 Quercus lobata HOM05D003819 ORTHO05D005291 4.3e-83 312.8 415 43.9
Sed0027609 Sechium edule HOM05D003819 ORTHO05D005291 4.3e-83 312.8 412 43.0
CAN.G1081.14 Capsicum annuum HOM05D003819 ORTHO05D005291 4.8e-82 309.3 415 44.6
CiPaw.03G195200 Carya illinoinensis HOM05D003819 ORTHO05D005291 4.8e-82 309.3 416 44.2
Aqoxy1G02044 Aquilegia oxysepala HOM05D003819 ORTHO05D005291 8.1e-82 308.5 420 43.6
FAN02G3241 Fragaria x ananassa HOM05D003819 ORTHO05D005291 8.1e-82 308.5 414 43.0
FAN05G0664 Fragaria x ananassa HOM05D003819 ORTHO05D005291 2.4e-81 307.0 412 42.7
FvH4_6g27480 Fragaria vesca HOM05D003819 ORTHO05D005291 3.1e-81 306.6 414 43.2
Solyc07g055120.4 Solanum lycopersicum HOM05D003819 ORTHO05D005291 3.1e-81 306.6 409 45.0
RcHm_v2.0_Chr2g0128401 Rosa chinensis HOM05D003819 ORTHO05D005291 5.3e-81 305.8 410 43.9
RcHm_v2.0_Chr2g0129761 Rosa chinensis HOM05D003819 ORTHO05D005291 5.3e-81 305.8 410 43.9
Gorai.008G099500 Gossypium raimondii HOM05D003819 ORTHO05D005291 9.0e-81 305.1 415 42.7
FAN14G1852 Fragaria x ananassa HOM05D003819 ORTHO05D005291 1.2e-80 304.7 414 43.0
FAN09G4766 Fragaria x ananassa HOM05D003819 ORTHO05D005291 1.5e-80 304.3 414 42.8
Gohir.D12G091900 Gossypium hirsutum HOM05D003819 ORTHO05D005291 1.5e-80 304.3 415 42.7
Gohir.A12G077800 Gossypium hirsutum HOM05D003819 ORTHO05D005291 5.8e-80 302.4 415 42.2
MBI06_g08600_MAGBIO Magnolia biondii HOM05D003819 ORTHO05D005291 7.6e-80 302.0 407 43.5
Cpa.g.sc52.168 Carica papaya HOM05D003819 ORTHO05D005291 9.9e-80 301.6 415 43.4
Ciclev10014472m.g Citrus clementina HOM05D003819 ORTHO05D005291 9.9e-80 301.6 414 44.0
Cfa023595 Carpinus fangiana HOM05D003819 ORTHO05D005291 2.9e-79 300.1 414 43.0
COL.COLO4_31287 Corchorus olitorius HOM05D003819 ORTHO05D005291 3.8e-79 299.7 417 41.0
Potri.011G066700 Populus trichocarpa HOM05D003819 ORTHO05D005291 4.9e-79 299.3 408 41.9
Duzib264G1063 Durio zibethinus HOM05D003819 ORTHO05D005291 6.4e-79 298.9 414 42.8
Thecc.06G169900 Theobroma cacao HOM05D003819 ORTHO05D005291 8.4e-79 298.5 416 41.3
Thecc.01G151000 Theobroma cacao HOM05D003819 ORTHO05D005291 1.9e-78 297.4 409 42.1
Dinv16776 Davidia involucrata HOM05D003819 ORTHO05D005291 5.4e-78 295.8 433 41.3
Gorai.010G159500 Gossypium raimondii HOM05D003819 ORTHO05D005291 5.4e-78 295.8 407 41.5
Dinv07714 Davidia involucrata HOM05D003819 ORTHO05D005291 7.1e-78 295.4 418 44.5
MD17G1266700 Malus domestica HOM05D003819 ORTHO05D005291 7.1e-78 295.4 414 41.3
Gohir.A06G131200 Gossypium hirsutum HOM05D003819 ORTHO05D005291 9.3e-78 295.0 436 39.9
Manes.17G056300 Manihot esculenta HOM05D003819 ORTHO05D005291 9.3e-78 295.0 417 41.2
CANSAT64G0548 Cannabis sativa HOM05D003819 ORTHO05D005291 1.0e-76 291.6 415 42.2
Duzib235G0786 Durio zibethinus HOM05D003819 ORTHO05D005291 3.9e-76 289.7 417 40.0
Lalb_Chr22g0356941 Lupinus albus HOM05D003819 ORTHO05D005291 6.7e-76 288.9 413 41.4
PGR142G0379 Punica granatum HOM05D003819 ORTHO05D005291 6.7e-76 288.9 408 42.6
Sc21g0004140 Simmondsia chinensis HOM05D003819 ORTHO05D005291 6.7e-76 288.9 415 42.9
MD09G1236800 Malus domestica HOM05D003819 ORTHO05D005291 8.7e-76 288.5 415 41.0
Prupe.3G117700 Prunus persica HOM05D003819 ORTHO05D005291 8.7e-76 288.5 424 41.7
Sabra11G0048300 Salix brachista HOM05D003819 ORTHO05D005291 1.1e-75 288.1 407 40.3
Gohir.D06G137250 Gossypium hirsutum HOM05D003819 ORTHO05D005291 1.9e-75 287.3 407 41.0
Potri.014G142600 Populus trichocarpa HOM05D003819 ORTHO05D005291 1.9e-75 287.3 414 41.5
Sabra14G0107700 Salix brachista HOM05D003819 ORTHO05D005291 2.5e-75 287.0 414 41.3
VMungo1127G0295 Vigna mungo HOM05D003819 ORTHO05D005291 3.3e-75 286.6 414 43.0
Phvul.011G129700 Phaseolus vulgaris HOM05D003819 ORTHO05D005291 1.6e-74 284.3 417 42.4
QL05p047385 Quercus lobata HOM05D003819 ORTHO05D005291 4.8e-74 282.7 414 40.6
Medtr4g080020 Medicago truncatula HOM05D003819 ORTHO05D005291 2.4e-73 280.4 417 39.6
TWI14G0201 Tripterygium wilfordii HOM05D003819 ORTHO05D005291 2.0e-72 277.3 420 42.1
Atru.chr10.1659 Acer truncatum HOM05D003819 ORTHO05D005291 2.6e-72 276.9 443 38.8
Eucgr.K01130 Eucalyptus grandis HOM05D003819 ORTHO05D005291 1.3e-71 274.6 420 40.7
BcaNung03224 Brassica carinata HOM05D003819 ORTHO05D005291 1.7e-71 274.2 417 40.0
Lalb_Chr03g0029931 Lupinus albus HOM05D003819 ORTHO05D005291 2.2e-71 273.9 423 41.4
C04p03960 Brassica napus HOM05D003819 ORTHO05D005291 2.9e-71 273.5 416 38.7
CDE10G0290 Ceratophyllum demersum HOM05D003819 ORTHO05D005291 3.8e-71 273.1 409 39.9
Lj3g0009870 Lotus japonicus HOM05D003819 ORTHO05D005291 8.4e-71 271.9 408 41.2
Lj3g0006196 Lotus japonicus HOM05D003819 ORTHO05D005291 1.9e-70 270.8 416 41.1
TPR.G4345 Trifolium pratense HOM05D003819 ORTHO05D005291 1.9e-70 270.8 418 40.2
Glyma.12G128600 Glycine max HOM05D003819 ORTHO05D005291 2.5e-70 270.4 414 41.1
BcaB06g29258 Brassica carinata HOM05D003819 ORTHO05D005291 7.1e-70 268.9 418 38.8
Gorai.011G039300 Gossypium raimondii HOM05D003819 ORTHO05D005291 9.3e-70 268.5 426 37.6
Gohir.D10G037300 Gossypium hirsutum HOM05D003819 ORTHO05D005291 2.1e-69 267.3 426 37.3
EL10Ac9g20949 Beta vulgaris HOM05D003819 ORTHO05D005291 2.7e-69 266.9 417 39.8
BolC4t22032H Brassica oleracea HOM05D003819 ORTHO05D005291 2.7e-69 266.9 443 37.2
A04p32330 Brassica napus HOM05D003819 ORTHO05D005291 6.0e-69 265.8 406 38.7
BraA04t18686Z Brassica rapa HOM05D003819 ORTHO05D005291 6.0e-69 265.8 406 38.7
Ca_18872_v3 Cicer arietinum L. HOM05D003819 ORTHO05D005291 3.0e-68 263.5 419 39.1
Glyma.06G277000 Glycine max HOM05D003819 ORTHO05D005291 3.0e-68 263.5 420 41.2
BcaC02g07227 Brassica carinata HOM05D003819 ORTHO05D005291 3.9e-68 263.1 418 38.0
C04p69840 Brassica napus HOM05D003819 ORTHO05D005291 3.9e-68 263.1 418 38.0
BolC4t28484H Brassica oleracea HOM05D003819 ORTHO05D005291 3.9e-68 263.1 418 38.0
Ciclev10017759m.g Citrus clementina HOM05D003819 ORTHO05D005291 3.9e-68 263.1 423 39.0
CARHR137760 Cardamine hirsuta HOM05D003819 ORTHO05D005291 6.7e-68 262.3 417 39.8
AL4G41180 Arabidopsis lyrata HOM05D003819 ORTHO05D005291 1.9e-67 260.8 415 39.5
SHI10509 Sapria himalayana HOM05D003819 ORTHO05D005291 1.9e-67 260.8 414 38.4
Haze_06225 Corylus avellana HOM05D003819 ORTHO05D005291 3.3e-67 260.0 403 37.7
BcaC02g12429 Brassica carinata HOM05D003819 ORTHO05D005291 7.4e-67 258.8 443 37.0
Dinv40684 Davidia involucrata HOM05D003819 ORTHO05D005291 9.6e-67 258.5 408 40.4
Aa31LG1G24420 Aethionema arabicum HOM05D003819 ORTHO05D005291 1.3e-66 258.1 414 37.4
Gohir.A10G036700 Gossypium hirsutum HOM05D003819 ORTHO05D005291 2.8e-66 256.9 392 39.3
Sp4g24760 Schrenkiella parvula HOM05D003819 ORTHO05D005291 3.7e-66 256.5 418 37.6
PSO229G0146 Papaver somniferum HOM05D003819 ORTHO05D005291 1.8e-65 254.2 407 39.6
Carub.0004s2507 Capsella rubella HOM05D003819 ORTHO05D005291 2.4e-65 253.8 418 38.5
CiPaw.09G070200 Carya illinoinensis HOM05D003819 ORTHO05D005291 3.1e-65 253.4 416 37.3
AT2G42620 Arabidopsis thaliana HOM05D003819 ORTHO05D005291 4.1e-65 253.1 412 39.3
Ah.01g003580 Amaranthus hybridus HOM05D003819 ORTHO05D005291 1.2e-64 251.5 417 39.3
Psat7g136560 Pisum sativum HOM05D003819 ORTHO05D005291 1.0e-63 248.4 426 36.9
THA.LOC104813346 Tarenaya hassleriana HOM05D003819 ORTHO05D005291 1.7e-63 247.7 424 38.0
AUR62042109 Chenopodium quinoa HOM05D003819 ORTHO05D005291 2.9e-63 246.9 425 36.7
THA.LOC104802258 Tarenaya hassleriana HOM05D003819 ORTHO05D005291 1.9e-62 244.2 411 38.9
SEGI_05136 Sequoiadendron giganteum HOM05D003819 ORTHO05D005291 3.9e-60 236.5 412 37.6
ATR0602G021 Amborella trichopoda HOM05D003819 ORTHO05D005291 1.2e-56 224.9 407 36.9
Mapoly0113s0006 Marchantia polymorpha HOM05D003819 ORTHO05D005291 1.8e-52 211.1 419 34.6
Pp3c17_1180 Physcomitrium patens HOM05D003819 ORTHO05D005291 2.0e-51 207.6 411 34.1
Peaxi162Scf00469g00034 Petunia axillaris HOM05D003819 ORTHO05D005291 9.7e-51 205.3 267 43.1
vmacro12379 Vaccinium macrocarpon HOM05D003819 ORTHO05D005291 2.2e-50 204.1 419 33.7
Zm00001eb376660 Zea mays HOM05D003819 ORTHO05D005291 9.1e-49 198.7 424 32.8
Haze_13379 Corylus avellana HOM05D003819 ORTHO05D005291 5.9e-48 196.1 196 53.6
SMO118G0454 Selaginella moellendorffii HOM05D003819 ORTHO05D005291 6.5e-47 192.6 418 32.8
AUR62040526 Chenopodium quinoa HOM05D003819 ORTHO05D005291 5.5e-46 189.5 402 33.1
Os06g0154200 Oryza sativa ssp. japonica HOM05D003819 ORTHO05D005291 9.4e-46 188.7 436 31.2
Zm00001eb270950 Zea mays HOM05D003819 ORTHO05D005291 3.6e-45 186.8 424 31.4
Thhalv10017925m.g Eutrema salsugineum HOM05D003819 ORTHO05D005291 3.2e-38 163.7 417 32.4
Nn1g09185 Nelumbo nucifera HOM05D003819 ORTHO05D005291 5.7e-35 152.9 272 34.9
Lj3g0028116 Lotus japonicus HOM05D003819 ORTHO05D005291 1.1e-33 148.7 274 36.1
AagrBONN_evm.TU.Sc2ySwM_228.1793 Anthoceros agrestis HOM05D003819 ORTHO05D005291 2.4e-33 147.5 174 45.4
Dinv24544 Davidia involucrata HOM05D003819 ORTHO05D005291 1.0e-28 132.1 145 49.7
FvH4_4g05521 Fragaria vesca HOM05D003819 ORTHO05D005291 6.3e-26 122.9 117 50.4
FvH4_2g05661 Fragaria vesca HOM05D003819 ORTHO05D025473 9.8e-19 99.0 113 48.7
FvH4_2g12921 Fragaria vesca HOM05D003819 ORTHO05D025473 1.1e-17 95.5 95 52.6
Atru.chr11.57 Acer truncatum HOM05D003819 ORTHO05D005291 7.0e-17 92.8 118 47.5
Nn1g05873 Nelumbo nucifera HOM05D003819 ORTHO05D005291 3.3e-14 84.0 78 52.6
Ciclev10026180m.g Citrus clementina HOM05D003819 ORTHO05D005291 1.8e-09 68.2 80 50.0
Cfa000614 Carpinus fangiana HOM05D003819 ORTHO05D005291 3.5e-08 63.9 106 35.8
Actinidia10955 Actinidia chinensis HOM05D003819 ORTHO05D005291 2.3e-07 61.2 112 33.9


User provided reference genes

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