Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 3.1e-72 275.0 139 100.0
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 5.5e-61 237.7 136 88.2
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 5.4e-40 167.9 136 63.2
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 2.0e-39 166.0 136 61.8
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 3.5e-39 165.2 134 64.9
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 3.5e-39 165.2 132 63.6
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 1.3e-38 163.3 136 64.0
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 1.1e-37 160.2 136 61.0
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 1.5e-37 159.8 135 63.0
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 2.5e-37 159.1 136 60.3
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 3.3e-37 158.7 135 62.2
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.2e-36 156.8 136 61.8
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 2.1e-36 156.0 135 61.5
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 2.8e-36 155.6 136 58.8
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.6e-36 155.2 136 59.6
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.7e-36 154.8 136 58.8
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.7e-36 154.8 136 59.6
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 8.1e-36 154.1 139 59.0
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 3.1e-35 152.1 134 59.7
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 4.0e-35 151.8 136 56.6
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.2e-35 151.4 133 58.6
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 6.8e-35 151.0 136 56.6
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 8.9e-35 150.6 136 58.8
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 1.5e-34 149.8 136 56.6
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.5e-34 149.8 136 55.9
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 2.0e-34 149.4 136 56.6
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 4.4e-34 148.3 138 55.1
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 5.8e-34 147.9 136 55.9
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 2.2e-33 146.0 132 55.3
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 8.3e-33 144.1 138 54.3
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.4e-32 142.5 136 52.9
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 3.2e-32 142.1 137 51.8
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 1.2e-31 140.2 139 51.1
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 1.6e-31 139.8 136 55.9
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 1.6e-31 139.8 136 52.9
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 2.7e-31 139.0 138 54.3
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 3.5e-31 138.7 139 51.8
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 1.0e-30 137.1 138 51.4
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 3.9e-30 135.2 135 53.3
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 3.9e-30 135.2 137 51.8
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 5.1e-30 134.8 134 52.2
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 5.1e-30 134.8 134 52.2
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 5.1e-30 134.8 138 53.6
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 6.6e-30 134.4 134 52.2
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 8.6e-30 134.0 136 49.3
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 1.5e-29 133.3 134 53.0
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 5.6e-29 131.3 134 53.0
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 5.6e-29 131.3 136 50.7
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 7.3e-29 131.0 134 52.2
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 7.3e-29 131.0 141 51.8
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 1.6e-28 129.8 137 51.1
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 3.6e-28 128.6 134 49.3
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 3.6e-28 128.6 138 47.8
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 3.6e-28 128.6 136 50.7
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 6.2e-28 127.9 134 51.5
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 8.1e-28 127.5 115 60.0
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 1.1e-27 127.1 134 53.7
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 1.8e-27 126.3 136 50.0
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 2.3e-27 125.9 139 48.9
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 2.3e-27 125.9 139 48.9
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 5.2e-27 124.8 136 50.0
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.2e-26 123.6 133 53.4
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.2e-26 123.6 133 53.4
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 1.2e-26 123.6 133 52.6
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 2.0e-26 122.9 137 48.9
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 2.6e-26 122.5 141 51.1
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 2.6e-26 122.5 141 51.1
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 3.4e-26 122.1 135 53.3
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 4.4e-26 121.7 136 52.2
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 5.8e-26 121.3 137 48.9
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 5.8e-26 121.3 136 47.1
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 7.6e-26 120.9 138 45.7
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 7.6e-26 120.9 139 48.2
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 7.6e-26 120.9 136 52.9
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 1.3e-25 120.2 135 49.6
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 1.7e-25 119.8 136 44.1
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 1.7e-25 119.8 134 47.0
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 2.2e-25 119.4 133 51.9
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 2.9e-25 119.0 138 46.4
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 2.9e-25 119.0 134 45.5
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 3.7e-25 118.6 136 44.1
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 6.4e-25 117.9 133 51.1
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 8.4e-25 117.5 136 51.5
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 8.4e-25 117.5 136 51.5
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 2.4e-24 115.9 136 44.1
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 2.4e-24 115.9 134 44.8
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 3.2e-24 115.5 136 47.1
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 7.1e-24 114.4 136 44.9
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 7.1e-24 114.4 136 44.1
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 9.2e-24 114.0 124 50.8
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 1.2e-23 113.6 134 44.0
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 2.1e-23 112.8 136 45.6
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 2.1e-23 112.8 137 45.3
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 2.1e-23 112.8 137 46.0
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 2.7e-23 112.5 136 44.1
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 7.8e-23 110.9 137 45.3
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 1.3e-22 110.2 137 46.0
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 1.3e-22 110.2 136 42.6
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 1.7e-22 109.8 137 45.3
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 5.1e-22 108.2 137 43.8
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 6.6e-22 107.8 137 44.5
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 6.6e-22 107.8 140 46.4
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 8.6e-22 107.5 137 43.8
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 8.6e-22 107.5 137 43.8
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 1.1e-21 107.1 137 46.7
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 1.1e-21 107.1 139 42.4
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 2.5e-21 105.9 137 45.3
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 2.5e-21 105.9 137 45.3
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 3.3e-21 105.5 138 44.9
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 4.3e-21 105.1 137 43.1
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 4.3e-21 105.1 137 43.1
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 4.3e-21 105.1 136 40.4
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 5.6e-21 104.8 137 43.1
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 5.6e-21 104.8 137 45.3
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 7.3e-21 104.4 100 53.0
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 9.6e-21 104.0 137 44.5
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 2.8e-20 102.4 136 39.7
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 2.8e-20 102.4 143 37.8
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 3.6e-20 102.1 138 42.8
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 3.6e-20 102.1 143 37.8
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 4.7e-20 101.7 136 43.4
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 1.8e-19 99.8 137 40.9
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 3.1e-19 99.0 136 41.2
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 6.8e-19 97.8 136 40.4
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 6.8e-19 97.8 147 42.2
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 6.8e-19 97.8 137 40.1
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 6.8e-19 97.8 137 42.3
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 8.9e-19 97.4 136 41.9
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 2.0e-18 96.3 136 40.4
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 4.4e-18 95.1 137 43.1
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 4.4e-18 95.1 138 42.8
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 1.7e-17 93.2 133 41.4
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 3.8e-17 92.0 138 37.7
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 3.2e-16 89.0 136 39.0
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 4.2e-16 88.6 134 41.0
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 7.1e-16 87.8 136 38.2
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 9.3e-16 87.4 115 40.0
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 3.5e-15 85.5 131 42.7
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 1.9e-13 79.7 136 33.8
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 6.2e-12 74.7 134 33.6
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.1e-11 73.9 124 37.9
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.1e-11 73.9 124 37.9
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.1e-11 73.9 124 37.9
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.1e-11 73.9 124 37.9
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 1.1e-11 73.9 131 35.1
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 1.1e-11 73.9 136 36.0
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.8e-11 73.2 136 30.9
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.2e-10 70.5 133 32.3
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 9.9e-10 67.4 133 29.3
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.9e-08 63.2 52 61.5
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 1.6e-07 60.1 78 43.6
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 5.1e-06 55.1 83 43.4
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 8.7e-06 54.3 53 49.1


User provided reference genes

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