Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053137.1 Olea europaea HOM05D005440 ORTHO05D007314 3.1e-273 944.5 464 100.0
Migut.L00575 Erythranthe guttata HOM05D005440 ORTHO05D007314 1.9e-161 573.2 483 63.4
Hma1.2p1_1803F.1_g302990 Hydrangea macrophylla HOM05D005440 ORTHO05D007314 1.5e-158 563.5 474 63.5
GSVIVG01026115001 Vitis vinifera HOM05D005440 ORTHO05D007314 1.6e-157 560.1 483 62.1
Peaxi162Scf00525g00411 Petunia axillaris HOM05D005440 ORTHO05D007314 8.1e-157 557.8 458 65.3
Sabra16G0027400 Salix brachista HOM05D005440 ORTHO05D007314 1.4e-156 557.0 425 66.8
Atru.chr5.954 Acer truncatum HOM05D005440 ORTHO05D007314 8.9e-156 554.3 465 61.9
Prupe.3G188100 Prunus persica HOM05D005440 ORTHO05D007314 8.9e-156 554.3 461 62.5
TAR627G1033 Trochodendron aralioides HOM05D005440 ORTHO05D007314 1.2e-155 553.9 474 61.0
Potri.016G021900 Populus trichocarpa HOM05D005440 ORTHO05D007314 5.8e-155 551.6 459 63.4
CiPaw.04G136100 Carya illinoinensis HOM05D005440 ORTHO05D007314 2.9e-154 549.3 468 61.3
Ciclev10011552m.g Citrus clementina HOM05D005440 ORTHO05D007314 4.9e-154 548.5 462 64.5
MSTRG.15262 Avicennia marina HOM05D005440 ORTHO05D007314 1.9e-153 546.6 475 62.1
Cc07_g20260 Coffea canephora HOM05D005440 ORTHO05D007314 2.4e-153 546.2 464 62.1
Rhsim12G0014000 Rhododendron simsii HOM05D005440 ORTHO05D007314 7.1e-153 544.7 443 64.6
MD09G1136900 Malus domestica HOM05D005440 ORTHO05D007314 9.2e-153 544.3 455 62.0
Gohir.A07G081000 Gossypium hirsutum HOM05D005440 ORTHO05D007314 7.8e-152 541.2 461 62.5
MD17G1127100 Malus domestica HOM05D005440 ORTHO05D007314 1.3e-151 540.4 455 62.2
Potri.006G023400 Populus trichocarpa HOM05D005440 ORTHO05D007314 1.3e-151 540.4 466 62.4
Lj6g0026846 Lotus japonicus HOM05D005440 ORTHO05D007314 1.7e-151 540.0 460 61.5
Duzib138G1709 Durio zibethinus HOM05D005440 ORTHO05D007314 5.1e-151 538.5 460 61.5
PGR004G2684 Punica granatum HOM05D005440 ORTHO05D007314 6.6e-151 538.1 456 62.5
CSS0043590 Camellia sinensis var. sinensis HOM05D005440 ORTHO05D007314 8.6e-151 537.7 448 63.6
Phvul.006G001800 Phaseolus vulgaris HOM05D005440 ORTHO05D007314 1.1e-150 537.3 461 61.2
CAN.G1156.52 Capsicum annuum HOM05D005440 ORTHO05D007314 1.5e-150 537.0 456 62.7
Sopen05g034920 Solanum pennellii HOM05D005440 ORTHO05D007314 1.5e-150 537.0 459 61.9
Gorai.001G092600 Gossypium raimondii HOM05D005440 ORTHO05D007314 1.9e-150 536.6 462 61.7
Nn5g27478 Nelumbo nucifera HOM05D005440 ORTHO05D007314 2.5e-150 536.2 479 60.1
Cfa023527 Carpinus fangiana HOM05D005440 ORTHO05D007314 4.3e-150 535.4 468 60.3
Solyc05g056520.4 Solanum lycopersicum HOM05D005440 ORTHO05D007314 4.3e-150 535.4 459 61.9
Lalb_Chr22g0360841 Lupinus albus HOM05D005440 ORTHO05D007314 9.6e-150 534.3 464 59.7
Glyma.20G065600 Glycine max HOM05D005440 ORTHO05D007314 1.2e-149 533.9 466 60.5
TWI60G0164 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 1.2e-149 533.9 456 61.8
Gohir.D07G086600 Gossypium hirsutum HOM05D005440 ORTHO05D007314 2.1e-149 533.1 469 61.6
Lalb_Chr24g0402811 Lupinus albus HOM05D005440 ORTHO05D007314 1.4e-148 530.4 463 59.8
THA.LOC104800970 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 1.4e-148 530.4 462 60.6
Sabra16G0024900 Salix brachista HOM05D005440 ORTHO05D007314 1.8e-148 530.0 407 66.3
CsaV3_4G032220 Cucumis sativus L. HOM05D005440 ORTHO05D007314 6.8e-148 528.1 466 60.1
Glyma.13G003900 Glycine max HOM05D005440 ORTHO05D007314 6.8e-148 528.1 465 60.2
MELO3C026396.2 Cucumis melo HOM05D005440 ORTHO05D007314 4.4e-147 525.4 473 59.2
Ca_16308_v3 Cicer arietinum L. HOM05D005440 ORTHO05D007314 7.6e-147 524.6 465 60.0
RcHm_v2.0_Chr2g0153881 Rosa chinensis HOM05D005440 ORTHO05D007314 1.3e-146 523.9 456 62.1
CANSAT64G0070 Cannabis sativa HOM05D005440 ORTHO05D007314 1.7e-146 523.5 468 60.5
HanXRQChr15g0468881 Helianthus annuus HOM05D005440 ORTHO05D007314 4.9e-146 521.9 465 60.2
TPR.G33572 Trifolium pratense HOM05D005440 ORTHO05D007314 6.4e-146 521.5 467 60.0
Sed0022130 Sechium edule HOM05D005440 ORTHO05D007314 7.1e-145 518.1 479 58.7
Aqoxy1G01485 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 9.3e-145 517.7 475 57.9
Duzib133G0846 Durio zibethinus HOM05D005440 ORTHO05D007314 2.1e-144 516.5 450 61.1
THA.LOC104826162 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 7.8e-144 514.6 462 59.5
Medtr3g081180 Medicago truncatula HOM05D005440 ORTHO05D007314 1.0e-143 514.2 465 58.7
Manes.09G077000 Manihot esculenta HOM05D005440 ORTHO05D007314 2.3e-143 513.1 463 61.8
FvH4_6g39770 Fragaria vesca HOM05D005440 ORTHO05D007314 5.1e-143 511.9 450 61.6
FAN02G0818 Fragaria x ananassa HOM05D005440 ORTHO05D007314 5.6e-142 508.4 454 60.8
Sc15g0002420 Simmondsia chinensis HOM05D005440 ORTHO05D007314 1.1e-140 504.2 469 59.5
FAN14G2598 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.4e-140 503.8 451 60.8
BcaB06g28584 Brassica carinata HOM05D005440 ORTHO05D007314 9.0e-140 501.1 469 57.8
A04p24740 Brassica napus HOM05D005440 ORTHO05D007314 9.0e-140 501.1 461 58.8
AUR62017608 Chenopodium quinoa HOM05D005440 ORTHO05D007314 2.0e-139 500.0 430 61.4
ECA233G3205 Erigeron canadensis HOM05D005440 ORTHO05D007314 2.6e-139 499.6 449 60.1
PSO675G6996 Papaver somniferum HOM05D005440 ORTHO05D007314 2.6e-139 499.6 470 58.1
AL4G27520 Arabidopsis lyrata HOM05D005440 ORTHO05D007314 4.4e-139 498.8 455 57.4
C04p61670 Brassica napus HOM05D005440 ORTHO05D007314 4.4e-139 498.8 457 58.2
Eucgr.K01335 Eucalyptus grandis HOM05D005440 ORTHO05D007314 5.8e-139 498.4 501 55.9
BcaC02g07946 Brassica carinata HOM05D005440 ORTHO05D007314 1.3e-138 497.3 461 57.7
BolC4t27650H Brassica oleracea HOM05D005440 ORTHO05D007314 1.3e-138 497.3 461 57.7
AT2G32170 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 1.7e-138 496.9 461 56.8
CARHR125970 Cardamine hirsuta HOM05D005440 ORTHO05D007314 2.2e-138 496.5 461 57.3
Sp4g14550 Schrenkiella parvula HOM05D005440 ORTHO05D007314 6.4e-138 495.0 467 56.7
SalBow5G0813 Salvia bowleyana HOM05D005440 ORTHO05D007314 1.4e-137 493.8 374 68.4
Carub.0004s1349 Capsella rubella HOM05D005440 ORTHO05D007314 9.3e-137 491.1 461 57.7
BraA04t17992Z Brassica rapa HOM05D005440 ORTHO05D007314 1.7e-135 486.9 511 52.8
PSO541G5910 Papaver somniferum HOM05D005440 ORTHO05D007314 3.0e-135 486.1 482 56.0
Potri.016G021400 Populus trichocarpa HOM05D005440 ORTHO05D007314 8.7e-135 484.6 419 61.1
HPP92_001868 Vanilla planifolia HOM05D005440 ORTHO05D007314 1.1e-134 484.2 479 55.5
arahy.Tifrunner.gnm1.ann1.TU4NXX Arachis hypogaea HOM05D005440 ORTHO05D007314 9.6e-134 481.1 472 56.6
ATR0763G213 Amborella trichopoda HOM05D005440 ORTHO05D007314 2.8e-133 479.6 456 56.8
vmacro08748 Vaccinium macrocarpon HOM05D005440 ORTHO05D007314 4.8e-133 478.8 465 57.8
TWI60G0012 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 9.0e-132 474.6 454 57.9
Os05g0511300 Oryza sativa ssp. japonica HOM05D005440 ORTHO05D007314 4.5e-131 472.2 471 55.4
Actinidia12520 Actinidia chinensis HOM05D005440 ORTHO05D007314 1.3e-130 470.7 447 56.6
DCAR_019996 Daucus carota HOM05D005440 ORTHO05D007314 2.2e-130 469.9 452 57.5
Zm00001eb292540 Zea mays HOM05D005440 ORTHO05D007314 9.3e-129 464.5 477 54.1
Nitab4.5_0000496g0020 Nicotiana tabacum HOM05D005440 ORTHO05D007314 1.2e-128 464.2 434 58.3
unitig_32.g10657 Utricularia gibba HOM05D005440 ORTHO05D007314 4.3e-126 455.7 433 57.7
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 5.6e-126 455.3 243 86.8
MBI18_g10015_MAGBIO Magnolia biondii HOM05D005440 ORTHO05D007314 9.0e-124 448.0 439 56.0
Thhalv10017571m.g Eutrema salsugineum HOM05D005440 ORTHO05D007314 1.1e-121 441.0 385 60.3
AT2G32160 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 2.1e-120 436.8 439 55.8
EL10Ac9g22859 Beta vulgaris HOM05D005440 ORTHO05D007314 2.1e-120 436.8 445 55.3
CDE06G0633 Ceratophyllum demersum HOM05D005440 ORTHO05D007314 3.5e-120 436.0 370 62.2
SEGI_34757 Sequoiadendron giganteum HOM05D005440 ORTHO05D007314 2.3e-119 433.3 530 48.1
AUR62015149 Chenopodium quinoa HOM05D005440 ORTHO05D007314 3.0e-119 433.0 500 49.0
Cpa.g.sc8.301 Carica papaya HOM05D005440 ORTHO05D007314 3.7e-117 426.0 400 56.8
Lsat_1_v5_gn_5_68301 Lactuca sativa HOM05D005440 ORTHO05D007314 8.4e-114 414.8 483 50.9
DCAR_009586 Daucus carota HOM05D005440 ORTHO05D007314 3.2e-113 412.9 228 83.3
Aa31LG5G4880 Aethionema arabicum HOM05D005440 ORTHO05D007314 2.7e-112 409.8 442 51.6
AagrBONN_evm.TU.Sc2ySwM_368.3314 Anthoceros agrestis HOM05D005440 ORTHO05D007314 9.7e-110 401.4 463 49.9
Pp3c17_14810 Physcomitrium patens HOM05D005440 ORTHO05D007314 1.6e-109 400.6 496 48.0
Carub.0004s1348 Capsella rubella HOM05D005440 ORTHO05D007314 2.8e-109 399.8 427 52.2
FAN09G4325 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.1e-108 397.9 404 54.7
ClCG11G016720 Citrullus lanatus HOM05D005440 ORTHO05D007314 2.9e-106 389.8 476 49.4
Haze_13637 Corylus avellana HOM05D005440 ORTHO05D007314 5.5e-105 385.6 372 55.4
Thecc.01G171200 Theobroma cacao HOM05D005440 ORTHO05D007314 7.2e-105 385.2 370 56.8
FAN05G0095 Fragaria x ananassa HOM05D005440 ORTHO05D007314 2.0e-102 377.1 450 51.1
Sabra06G0017100 Salix brachista HOM05D005440 ORTHO05D007314 2.2e-101 373.6 510 47.3
Dinv02983 Davidia involucrata HOM05D005440 ORTHO05D007314 3.7e-101 372.9 798 34.0
Pp3c1_31970 Physcomitrium patens HOM05D005440 ORTHO05D007314 1.5e-99 367.5 494 44.1
Mapoly0014s0077 Marchantia polymorpha HOM05D005440 ORTHO05D007314 1.4e-97 360.9 531 41.8
Sabra16G0025200 Salix brachista HOM05D005440 ORTHO05D007314 1.0e-90 338.2 423 47.3
SMO358G0560 Selaginella moellendorffii HOM05D005440 ORTHO05D007314 1.0e-90 338.2 226 68.1
arahy.Tifrunner.gnm1.ann1.Z94T11 Arachis hypogaea HOM05D005440 ORTHO05D007314 8.0e-88 328.6 390 50.5
CBR_g29536 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-86 323.9 227 64.8
Psat5g108080 Pisum sativum HOM05D005440 ORTHO05D007314 2.2e-82 310.5 334 53.3
Ah.01g013380 Amaranthus hybridus HOM05D005440 ORTHO05D007314 9.8e-78 295.0 304 53.9
CARHR125960 Cardamine hirsuta HOM05D005440 ORTHO05D007314 3.6e-72 276.6 184 70.1
Cre03.g188950 Chlamydomonas reinhardtii HOM05D005440 ORTHO05D007314 1.7e-69 267.7 420 38.6
Nitab4.5_0002704g0030 Nicotiana tabacum HOM05D005440 ORTHO05D007314 6.3e-69 265.8 442 42.5
MCO05G304 Micromonas commoda HOM05D005440 ORTHO05D007314 7.0e-68 262.3 256 51.2
Sabra16G0027100 Salix brachista HOM05D005440 ORTHO05D007314 4.9e-61 239.6 454 37.9
PRCOL_00002828 Prasinoderma coloniale HOM05D005440 ORTHO05D007314 1.1e-60 238.4 306 43.1
SGA_v2.0_scaffold35G13960 Striga asiatica HOM05D005440 ORTHO05D007314 1.9e-57 227.6 119 89.1
Aqoxy1G03388 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 9.5e-57 225.3 384 40.6
Atru.ctg1434.11 Acer truncatum HOM05D005440 ORTHO05D007314 3.1e-55 220.3 279 43.0
Lj4C830T18 Lonicera japonica HOM05D005440 ORTHO05D007314 4.6e-51 206.5 113 84.1
Cfa026418 Carpinus fangiana HOM05D005440 ORTHO05D007314 8.6e-50 202.2 268 40.7
Psat5g108160 Pisum sativum HOM05D005440 ORTHO05D007314 1.9e-49 201.1 110 83.6
CARHR125950 Cardamine hirsuta HOM05D005440 ORTHO05D007314 2.1e-35 154.5 86 82.6
Hund08219 Selenicereus undatus HOM05D005440 ORTHO05D007314 4.3e-33 146.7 87 78.2
Lj4A830T38 Lonicera japonica HOM05D005440 ORTHO05D007314 4.3e-25 120.2 71 80.3
RcHm_v2.0_Chr2g0172691 Rosa chinensis HOM05D005440 ORTHO05D007314 3.4e-22 110.5 60 81.7
Hund08218 Selenicereus undatus HOM05D005440 ORTHO05D007314 9.3e-20 102.4 81 60.5
Dinv02985 Davidia involucrata HOM05D005440 ORTHO05D034043 4.0e-15 87.0 59 71.2
RcHm_v2.0_Chr5g0059521 Rosa chinensis HOM05D005440 ORTHO05D007314 2.0e-14 84.7 41 90.2
CAN.G93.4 Capsicum annuum HOM05D000541 ORTHO05D000137 5.1e-10 70.1 94 45.7
CAN.G62.19 Capsicum annuum HOM05D001673 ORTHO05D013418 6.7e-10 69.7 49 69.4
CAN.G80.1 Capsicum annuum HOM05D001673 ORTHO05D022156 7.4e-09 66.2 71 52.1
CAN.G1245.16 Capsicum annuum HOM05D001673 ORTHO05D022156 2.1e-08 64.7 43 72.1
SEGI_40090 Sequoiadendron giganteum HOM05D005440 ORTHO05D034043 1.5e-06 58.5 45 55.6


User provided reference genes

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