Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052930.1 Olea europaea HOM05D001419 ORTHO05D001376 1.1e-52 209.9 126 100.0
Migut.I00608 Erythranthe guttata HOM05D001419 ORTHO05D001376 1.9e-36 156.0 123 78.9
MSTRG.22857 Avicennia marina HOM05D001419 ORTHO05D001376 1.6e-35 152.9 125 78.4
SalBow7G3881 Salvia bowleyana HOM05D001419 ORTHO05D001376 1.4e-34 149.8 129 76.0
Nitab4.5_0002046g0180 Nicotiana tabacum HOM05D001419 ORTHO05D001376 6.4e-32 141.0 123 74.8
Sopen03g037290 Solanum pennellii HOM05D001419 ORTHO05D001376 1.1e-31 140.2 123 74.0
Solyc03g118390.3 Solanum lycopersicum HOM05D001419 ORTHO05D001376 1.9e-31 139.4 123 72.4
SGA_v2.0_scaffold40G15618 Striga asiatica HOM05D001419 ORTHO05D001376 2.4e-31 139.0 123 74.8
Nitab4.5_0002450g0040 Nicotiana tabacum HOM05D001419 ORTHO05D001376 4.1e-31 138.3 123 74.0
Cc04_g05950 Coffea canephora HOM05D001419 ORTHO05D001376 1.2e-30 136.7 129 70.5
Ca_16082_v3 Cicer arietinum L. HOM05D001419 ORTHO05D001376 6.0e-30 134.4 126 68.3
Peaxi162Scf00314g00524 Petunia axillaris HOM05D001419 ORTHO05D001376 2.3e-29 132.5 123 71.5
TPR.G21593 Trifolium pratense HOM05D001419 ORTHO05D001376 5.6e-28 127.9 126 68.3
Dinv23208 Davidia involucrata HOM05D001419 ORTHO05D001376 6.2e-27 124.4 123 69.9
Lsat_1_v5_gn_1_32281 Lactuca sativa HOM05D001419 ORTHO05D001376 6.2e-27 124.4 124 71.8
Actinidia18315 Actinidia chinensis HOM05D001419 ORTHO05D001376 1.4e-26 123.2 123 68.3
Actinidia25533 Actinidia chinensis HOM05D001419 ORTHO05D001376 3.1e-26 122.1 121 65.3
Phvul.009G164500 Phaseolus vulgaris HOM05D001419 ORTHO05D001376 5.2e-26 121.3 130 59.2
Medtr3g498775 Medicago truncatula HOM05D001419 ORTHO05D001376 1.2e-25 120.2 124 66.1
DCAR_021409 Daucus carota HOM05D001419 ORTHO05D001376 1.5e-25 119.8 123 65.0
TWI23G1068 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 2.6e-25 119.0 126 61.9
HanXRQChr02g0034241 Helianthus annuus HOM05D001419 ORTHO05D001376 3.4e-25 118.6 124 68.5
TWI39G0619 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 3.4e-25 118.6 124 60.5
Thecc.03G138300 Theobroma cacao HOM05D001419 ORTHO05D001376 5.8e-25 117.9 125 68.8
CSS0013744 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 7.6e-25 117.5 123 68.3
CSS0018390 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 7.6e-25 117.5 123 68.3
MD06G1132600 Malus domestica HOM05D001419 ORTHO05D001376 9.9e-25 117.1 125 64.8
COL.COLO4_16706 Corchorus olitorius HOM05D001419 ORTHO05D001376 2.9e-24 115.5 125 66.4
unitig_22.g6270 Utricularia gibba HOM05D001419 ORTHO05D001376 3.8e-24 115.2 124 64.5
CANSAT56G3001 Cannabis sativa HOM05D001419 ORTHO05D001376 4.9e-24 114.8 124 65.3
PGR119G0468 Punica granatum HOM05D001419 ORTHO05D001376 8.4e-24 114.0 129 65.9
Lalb_Chr08g0237471 Lupinus albus HOM05D001419 ORTHO05D001376 1.1e-23 113.6 132 62.1
Psat6g106800 Pisum sativum HOM05D001419 ORTHO05D001376 1.1e-23 113.6 125 64.0
Prupe.5G143600 Prunus persica HOM05D001419 ORTHO05D001376 1.1e-23 113.6 125 64.8
arahy.Tifrunner.gnm1.ann1.GTVX5U Arachis hypogaea HOM05D001419 ORTHO05D001376 2.4e-23 112.5 133 63.2
arahy.Tifrunner.gnm1.ann1.VH54GQ Arachis hypogaea HOM05D001419 ORTHO05D001376 2.4e-23 112.5 133 62.4
DCAR_016354 Daucus carota HOM05D001419 ORTHO05D001376 4.2e-23 111.7 123 62.6
Duzib205G1629 Durio zibethinus HOM05D001419 ORTHO05D001376 4.2e-23 111.7 125 65.6
Manes.06G125500 Manihot esculenta HOM05D001419 ORTHO05D001376 5.4e-23 111.3 126 64.3
FAN18G1957 Fragaria x ananassa HOM05D001419 ORTHO05D001376 7.1e-23 110.9 126 62.7
Cpa.g.sc4.110 Carica papaya HOM05D001419 ORTHO05D001376 9.3e-23 110.5 130 64.6
FAN13G1977 Fragaria x ananassa HOM05D001419 ORTHO05D001376 9.3e-23 110.5 126 61.9
Gohir.D11G041500 Gossypium hirsutum HOM05D001419 ORTHO05D001376 9.3e-23 110.5 125 65.6
FvH4_5g09200 Fragaria vesca HOM05D001419 ORTHO05D001376 1.2e-22 110.2 126 63.5
Gorai.008G210100 Gossypium raimondii HOM05D001419 ORTHO05D001376 1.2e-22 110.2 125 66.4
FAN04G1873 Fragaria x ananassa HOM05D001419 ORTHO05D001376 1.6e-22 109.8 125 61.6
Gorai.007G044600 Gossypium raimondii HOM05D001419 ORTHO05D001376 1.6e-22 109.8 125 65.6
RcHm_v2.0_Chr7g0188961 Rosa chinensis HOM05D001419 ORTHO05D001376 2.1e-22 109.4 126 64.3
MSTRG.11234 Avicennia marina HOM05D001419 ORTHO05D001376 2.7e-22 109.0 127 59.8
Gohir.A12G193300 Gossypium hirsutum HOM05D001419 ORTHO05D001376 6.0e-22 107.8 124 67.7
Lalb_Chr23g0272941 Lupinus albus HOM05D001419 ORTHO05D001376 1.3e-21 106.7 130 62.3
Lj1g0002101 Lotus japonicus HOM05D001419 ORTHO05D001376 2.3e-21 105.9 129 60.5
MD14G1149000 Malus domestica HOM05D001419 ORTHO05D001376 3.0e-21 105.5 124 60.5
FAN08G1260 Fragaria x ananassa HOM05D001419 ORTHO05D001376 3.9e-21 105.1 126 61.9
Rhsim08G0195700 Rhododendron simsii HOM05D001419 ORTHO05D001376 5.1e-21 104.8 123 65.0
Haze_07114 Corylus avellana HOM05D001419 ORTHO05D001376 8.7e-21 104.0 126 62.7
Potri.015G104600 Populus trichocarpa HOM05D001419 ORTHO05D001376 1.1e-20 103.6 128 63.3
Glyma.06G165500 Glycine max HOM05D001419 ORTHO05D001376 1.5e-20 103.2 76 75.0
ClCG03G004000 Citrullus lanatus HOM05D001419 ORTHO05D001376 7.3e-20 100.9 126 60.3
Gohir.A11G038200 Gossypium hirsutum HOM05D001419 ORTHO05D001376 7.3e-20 100.9 125 62.4
CsaV3_1G009890 Cucumis sativus L. HOM05D001419 ORTHO05D001376 9.6e-20 100.5 126 59.5
vmacro19164 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 9.6e-20 100.5 123 63.4
QL10p000923 Quercus lobata HOM05D001419 ORTHO05D001376 1.6e-19 99.8 128 58.6
Eucgr.B00074 Eucalyptus grandis HOM05D001419 ORTHO05D001376 2.1e-19 99.4 124 62.1
Lj5A89G33 Lonicera japonica HOM05D001419 ORTHO05D001376 2.1e-19 99.4 66 83.3
Glyma.04G200100 Glycine max HOM05D001419 ORTHO05D001376 2.8e-19 99.0 132 60.6
Lalb_Chr11g0069281 Lupinus albus HOM05D001419 ORTHO05D001376 6.9e-18 94.4 130 52.3
Potri.012G105400 Populus trichocarpa HOM05D001419 ORTHO05D001376 6.9e-18 94.4 127 54.3
MELO3C002384.2 Cucumis melo HOM05D001419 ORTHO05D001376 9.0e-18 94.0 126 58.7
Sed0020575 Sechium edule HOM05D001419 ORTHO05D001376 9.0e-18 94.0 126 59.5
Rhsim12G0180400 Rhododendron simsii HOM05D001419 ORTHO05D001376 2.6e-17 92.4 124 58.1
Sed0027714 Sechium edule HOM05D001419 ORTHO05D001376 3.4e-17 92.0 132 54.5
ECA247G2807 Erigeron canadensis HOM05D001419 ORTHO05D001376 5.8e-17 91.3 131 58.0
Ciclev10031078m.g Citrus clementina HOM05D001419 ORTHO05D001376 9.9e-17 90.5 140 55.7
CAN.G843.26 Capsicum annuum HOM05D001419 ORTHO05D001376 6.4e-16 87.8 92 69.6
Sabra12G0077800 Salix brachista HOM05D001419 ORTHO05D001376 6.4e-16 87.8 128 55.5
arahy.Tifrunner.gnm1.ann1.EB1MMR Arachis hypogaea HOM05D001419 ORTHO05D001376 1.1e-15 87.0 130 55.4
CSS0017420 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 1.1e-15 87.0 132 53.8
Dinv18818 Davidia involucrata HOM05D001419 ORTHO05D001376 1.1e-15 87.0 128 56.2
Sabra15G0124300 Salix brachista HOM05D001419 ORTHO05D001376 1.4e-15 86.7 124 58.1
Peaxi162Scf00053g00253 Petunia axillaris HOM05D001419 ORTHO05D001376 1.9e-15 86.3 63 74.6
TAR629G0843 Trochodendron aralioides HOM05D001419 ORTHO05D001376 2.4e-15 85.9 123 57.7
GSVIVG01008631001 Vitis vinifera HOM05D001419 ORTHO05D001376 3.2e-15 85.5 123 51.2
Aa31LG4G17370 Aethionema arabicum HOM05D001419 ORTHO05D001376 5.4e-15 84.7 134 54.5
CARHR189850 Cardamine hirsuta HOM05D001419 ORTHO05D001376 7.1e-15 84.3 128 53.9
Atru.chr11.2422 Acer truncatum HOM05D001419 ORTHO05D001376 1.6e-14 83.2 135 52.6
BcaB01g00776 Brassica carinata HOM05D001419 ORTHO05D001376 2.1e-14 82.8 135 55.6
CiPaw.05G102800 Carya illinoinensis HOM05D001419 ORTHO05D001376 2.1e-14 82.8 125 52.8
MBI11_g43871_MAGBIO Magnolia biondii HOM05D001419 ORTHO05D001376 2.1e-14 82.8 126 54.0
Sp5g13190 Schrenkiella parvula HOM05D001419 ORTHO05D001376 2.1e-14 82.8 134 53.7
BcaC07g39361 Brassica carinata HOM05D001419 ORTHO05D001376 2.7e-14 82.4 135 56.3
A06p18890 Brassica napus HOM05D001419 ORTHO05D001376 2.7e-14 82.4 135 56.3
C08p23830 Brassica napus HOM05D001419 ORTHO05D001376 2.7e-14 82.4 135 56.3
BolC8t50009H Brassica oleracea HOM05D001419 ORTHO05D001376 2.7e-14 82.4 135 56.3
BraA06t24972Z Brassica rapa HOM05D001419 ORTHO05D001376 2.7e-14 82.4 135 56.3
MD13G1129100 Malus domestica HOM05D001419 ORTHO05D001376 2.7e-14 82.4 125 52.8
CiPaw.11G001500 Carya illinoinensis HOM05D001419 ORTHO05D001376 3.5e-14 82.0 127 55.9
MD16G1129000 Malus domestica HOM05D001419 ORTHO05D001376 3.5e-14 82.0 125 50.4
Carub.0005s1503 Capsella rubella HOM05D001419 ORTHO05D001376 4.6e-14 81.6 134 54.5
Gohir.D01G131900 Gossypium hirsutum HOM05D001419 ORTHO05D001376 4.6e-14 81.6 132 49.2
Gorai.002G163500 Gossypium raimondii HOM05D001419 ORTHO05D001376 6.0e-14 81.3 132 49.2
Ah.02g114670 Amaranthus hybridus HOM05D001419 ORTHO05D001376 7.9e-14 80.9 129 46.5
Aa31LG8G2550 Aethionema arabicum HOM05D000710 ORTHO05D000336 1.3e-13 80.1 134 53.0
CARHR157670 Cardamine hirsuta HOM05D001419 ORTHO05D001376 1.3e-13 80.1 134 53.7
ClCG06G001770 Citrullus lanatus HOM05D001419 ORTHO05D001376 1.3e-13 80.1 123 52.0
Gohir.A01G140900 Gossypium hirsutum HOM05D001419 ORTHO05D001376 1.3e-13 80.1 132 47.7
Hma1.2p1_0168F.1_g074060 Hydrangea macrophylla HOM05D001419 ORTHO05D001376 1.3e-13 80.1 94 55.3
Thecc.02G194800 Theobroma cacao HOM05D001419 ORTHO05D001376 1.3e-13 80.1 133 48.1
Thhalv10010238m.g Eutrema salsugineum HOM05D001419 ORTHO05D001376 1.7e-13 79.7 134 53.0
HanXRQChr10g0288531 Helianthus annuus HOM05D001419 ORTHO05D001376 1.7e-13 79.7 123 52.8
AL5G28370 Arabidopsis lyrata HOM05D001419 ORTHO05D001376 2.3e-13 79.3 134 53.7
Potri.003G164100 Populus trichocarpa HOM05D001419 ORTHO05D001376 3.0e-13 79.0 131 47.3
AT3G48860 Arabidopsis thaliana HOM05D001419 ORTHO05D001376 3.9e-13 78.6 134 53.7
MELO3C022352.2 Cucumis melo HOM05D001419 ORTHO05D001376 3.9e-13 78.6 123 52.0
GSVIVG01004935001 Vitis vinifera HOM05D001419 ORTHO05D001376 5.1e-13 78.2 122 50.8
Prupe.1G217300 Prunus persica HOM05D001419 ORTHO05D001376 6.6e-13 77.8 126 52.4
Duzib052G0768 Durio zibethinus HOM05D001419 ORTHO05D001376 8.7e-13 77.4 134 48.5
CsaV3_6G007810 Cucumis sativus L. HOM05D001419 ORTHO05D001376 1.1e-12 77.0 124 54.8
arahy.Tifrunner.gnm1.ann1.CZFN8K Arachis hypogaea HOM05D001419 ORTHO05D001376 1.5e-12 76.6 124 49.2
Thhalv10003911m.g Eutrema salsugineum HOM05D001419 ORTHO05D001376 2.5e-12 75.9 124 51.6
CiPaw.06G108400 Carya illinoinensis HOM05D001419 ORTHO05D001376 3.3e-12 75.5 124 48.4
Ca_11433_v3 Cicer arietinum L. HOM05D001419 ORTHO05D001376 3.3e-12 75.5 105 52.4
PGR119G0966 Punica granatum HOM05D001419 ORTHO05D001376 3.3e-12 75.5 123 44.7
SHI14172 Sapria himalayana HOM05D001419 ORTHO05D001376 3.3e-12 75.5 113 60.2
HPP92_009736 Vanilla planifolia HOM05D001419 ORTHO05D001376 7.4e-12 74.3 133 45.9
Atru.chr6.1899 Acer truncatum HOM05D001419 ORTHO05D001376 9.6e-12 73.9 127 52.8
AUR62034773 Chenopodium quinoa HOM05D001419 ORTHO05D001376 9.6e-12 73.9 69 66.7
Haze_12486 Corylus avellana HOM05D001419 ORTHO05D001376 9.6e-12 73.9 128 46.9
Sc22g0003510 Simmondsia chinensis HOM05D001419 ORTHO05D001376 1.3e-11 73.6 130 49.2
AT5G23700 Arabidopsis thaliana HOM05D001419 ORTHO05D001376 1.6e-11 73.2 123 49.6
arahy.Tifrunner.gnm1.ann1.UB3YHQ Arachis hypogaea HOM05D001419 ORTHO05D001376 1.6e-11 73.2 123 48.8
QL03p049793 Quercus lobata HOM05D001419 ORTHO05D001376 1.6e-11 73.2 128 48.4
PSO478G0009 Papaver somniferum HOM05D001419 ORTHO05D001376 2.1e-11 72.8 131 55.7
Sed0026417 Sechium edule HOM05D001419 ORTHO05D001376 2.1e-11 72.8 125 49.6
Cpa.g.c28892 Carica papaya HOM05D001419 ORTHO05D001376 3.6e-11 72.0 124 46.0
AL6G34970 Arabidopsis lyrata HOM05D001419 ORTHO05D001376 4.8e-11 71.6 124 50.8
PSO017G0003 Papaver somniferum HOM05D001419 ORTHO05D001376 4.8e-11 71.6 134 54.5
Carub.0006s2145 Capsella rubella HOM05D001419 ORTHO05D001376 1.1e-10 70.5 68 63.2
Cfa009435 Carpinus fangiana HOM05D001419 ORTHO05D001376 1.4e-10 70.1 130 46.9
FAN23G0283 Fragaria x ananassa HOM05D001419 ORTHO05D016050 1.4e-10 70.1 97 57.7
Actinidia22125 Actinidia chinensis HOM05D001419 ORTHO05D001376 1.8e-10 69.7 128 53.1
Actinidia30595 Actinidia chinensis HOM05D001419 ORTHO05D001376 1.8e-10 69.7 128 48.4
Cfa018722 Carpinus fangiana HOM05D001419 ORTHO05D001376 4.0e-10 68.6 97 59.8
FvH4_4g22850 Fragaria vesca HOM05D001419 ORTHO05D001376 4.0e-10 68.6 119 47.9
FAN12G3369 Fragaria x ananassa HOM05D001419 ORTHO05D001376 4.0e-10 68.6 119 47.9
RcHm_v2.0_Chr4g0429091 Rosa chinensis HOM05D001419 ORTHO05D001376 5.3e-10 68.2 119 47.1
Sp6g30730 Schrenkiella parvula HOM05D001419 ORTHO05D001376 5.3e-10 68.2 131 43.5
CDE05G2604 Ceratophyllum demersum HOM05D001419 ORTHO05D001376 9.0e-10 67.4 131 51.1
FAN07G2814 Fragaria x ananassa HOM05D001419 ORTHO05D001376 9.0e-10 67.4 119 46.2
FAN17G3068 Fragaria x ananassa HOM05D001419 ORTHO05D001376 9.0e-10 67.4 119 46.2
Aa31LG11G3040 Aethionema arabicum HOM05D001419 ORTHO05D001376 1.2e-09 67.0 132 44.7
LjContig00470g0006858 Lotus japonicus HOM05D001419 ORTHO05D001376 1.2e-09 67.0 114 46.5
THA.LOC104825466 Tarenaya hassleriana HOM05D001419 ORTHO05D001376 1.5e-09 66.6 125 46.4
Sp2g23530 Schrenkiella parvula HOM05D001419 ORTHO05D001376 2.0e-09 66.2 125 44.8
FvH4_3g24840 Fragaria vesca HOM05D001419 ORTHO05D016050 5.8e-09 64.7 126 42.9
Solyc05g023770.4 Solanum lycopersicum HOM05D001419 ORTHO05D001376 9.9e-09 63.9 132 53.8
Sopen05g018390 Solanum pennellii HOM05D001419 ORTHO05D001376 9.9e-09 63.9 132 53.8
Lsat_1_v5_gn_8_146081 Lactuca sativa HOM05D001419 ORTHO05D001376 1.7e-08 63.2 132 48.5
ATR0582G200 Amborella trichopoda HOM05D001419 ORTHO05D001376 2.2e-08 62.8 123 48.8
MBI11_g37360_MAGBIO Magnolia biondii HOM05D001419 ORTHO05D001376 2.2e-08 62.8 125 45.6
Nn3g21279 Nelumbo nucifera HOM05D001419 ORTHO05D001376 2.2e-08 62.8 88 51.1
Sabra01G0045600 Salix brachista HOM05D001419 ORTHO05D001376 3.8e-08 62.0 127 44.9
BcaC04g19130 Brassica carinata HOM05D001419 ORTHO05D001376 6.4e-08 61.2 126 39.7
BolC9t59222H Brassica oleracea HOM05D001419 ORTHO05D001376 6.4e-08 61.2 126 39.7
TWI36G1167 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 6.4e-08 61.2 104 47.1
Aqoxy5G00629 Aquilegia oxysepala HOM05D001419 ORTHO05D001376 8.4e-08 60.8 100 52.0
CSS0009563 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 8.4e-08 60.8 102 48.0
AUR62009515 Chenopodium quinoa HOM05D001419 ORTHO05D001376 8.4e-08 60.8 71 59.2
HPP92_011741 Vanilla planifolia HOM05D001419 ORTHO05D001376 8.4e-08 60.8 123 43.9
HanXRQChr08g0210371 Helianthus annuus HOM05D001419 ORTHO05D001376 1.4e-07 60.1 132 42.4
TWI75G0697 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 1.4e-07 60.1 126 40.5
arahy.Tifrunner.gnm1.ann1.HMP1BQ Arachis hypogaea HOM05D001419 ORTHO05D001376 1.9e-07 59.7 125 41.6
Lj4g0006726 Lotus japonicus HOM05D001419 ORTHO05D001376 1.9e-07 59.7 121 47.1
CDE05G1489 Ceratophyllum demersum HOM05D001419 ORTHO05D001376 3.2e-07 58.9 119 49.6
Lalb_Chr02g0144731 Lupinus albus HOM05D001419 ORTHO05D001376 5.5e-07 58.2 99 55.6
Lj6A836G34 Lonicera japonica HOM05D001419 ORTHO05D001376 9.3e-07 57.4 126 42.9
Glyma.20G250000 Glycine max HOM05D001419 ORTHO05D001376 2.7e-06 55.8 116 52.6
PSO017G3672 Papaver somniferum HOM05D001419 ORTHO05D001376 2.7e-06 55.8 105 48.6
Psat6g244240 Pisum sativum HOM05D001419 ORTHO05D001376 2.7e-06 55.8 96 55.2
TAR633G1372 Trochodendron aralioides HOM05D001419 ORTHO05D001376 3.5e-06 55.5 67 52.2
ECA233G5414 Erigeron canadensis HOM05D001419 ORTHO05D001376 4.6e-06 55.1 128 43.0
Sc04g0010520 Simmondsia chinensis HOM05D001419 ORTHO05D001376 4.6e-06 55.1 141 38.3
Oeu003272.3 Olea europaea HOM05D001419 ORTHO05D001376 6.0e-06 54.7 126 49.2


User provided reference genes

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