Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052884.2 Olea europaea HOM05D003079 ORTHO05D003461 1.4e-143 513.1 277 100.0
Oeu006261.2 Olea europaea HOM05D003079 ORTHO05D003461 7.4e-49 198.4 339 44.2
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 9.7e-49 198.0 319 44.2
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 1.4e-47 194.1 319 44.8
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 1.1e-41 174.5 269 45.7
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 2.0e-41 173.7 318 42.1
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 3.3e-41 172.9 324 40.4
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 8.2e-40 168.3 322 43.2
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 2.6e-38 163.3 372 36.3
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 2.2e-37 160.2 355 38.6
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 2.7e-35 153.3 354 35.6
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.7e-35 153.3 373 36.7
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 8.0e-35 151.8 302 40.1
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.0e-34 151.4 302 40.1
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 1.0e-34 151.4 358 35.2
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 1.8e-34 150.6 374 35.0
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.8e-34 150.6 369 33.3
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 1.8e-34 150.6 284 41.9
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.8e-34 150.6 372 34.4
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 3.0e-34 149.8 362 33.7
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 6.7e-34 148.7 378 34.7
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 2.0e-33 147.1 294 40.1
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.3e-33 146.4 389 34.2
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 4.4e-33 146.0 372 33.6
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 5.7e-33 145.6 303 37.6
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.7e-32 144.1 360 31.4
SGA_v2.0_scaffold186G40233 Striga asiatica HOM05D003079 ORTHO05D003461 2.8e-32 143.3 297 38.4
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 8.2e-32 141.7 359 32.0
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.4e-31 141.0 373 34.9
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 3.1e-31 139.8 349 35.8
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 4.1e-31 139.4 363 33.3
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 4.1e-31 139.4 367 33.2
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 5.3e-31 139.0 351 31.3
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 5.3e-31 139.0 368 34.2
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.5e-30 136.3 373 34.0
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 7.7e-30 135.2 378 31.7
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 7.7e-30 135.2 363 33.6
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 2.2e-29 133.7 370 31.9
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 3.8e-29 132.9 365 31.8
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 1.1e-28 131.3 378 33.9
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 1.5e-28 131.0 360 33.9
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 7.2e-28 128.6 433 30.5
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 1.2e-27 127.9 378 31.5
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 1.6e-27 127.5 361 32.7
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.6e-27 127.5 361 32.7
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 2.7e-27 126.7 372 31.7
SGA_v2.0_scaffold7G03549 Striga asiatica HOM05D003079 ORTHO05D003461 3.6e-27 126.3 291 36.4
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 4.7e-27 125.9 372 31.5
MSTRG.14525 Avicennia marina HOM05D003079 ORTHO05D003461 8.0e-27 125.2 280 37.1
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 1.8e-26 124.0 376 30.9
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 1.8e-26 124.0 352 33.5
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 2.3e-26 123.6 361 32.4
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 2.3e-26 123.6 362 31.2
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 5.2e-26 122.5 345 32.5
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 5.2e-26 122.5 349 32.1
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 4.4e-25 119.4 357 33.6
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 4.4e-25 119.4 363 33.1
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.3e-24 117.9 376 31.6
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 1.3e-24 117.9 375 31.2
Solyc07g066170.4 Solanum lycopersicum HOM05D003079 ORTHO05D003461 1.7e-24 117.5 256 35.2
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.7e-24 116.3 376 31.4
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.7e-24 116.3 376 31.1
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 8.3e-24 115.2 368 29.1
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.1e-23 114.8 375 29.9
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 1.8e-23 114.0 352 31.0
Carub.0007s1447 Capsella rubella HOM05D003079 ORTHO05D003461 4.1e-23 112.8 296 33.1
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 7.0e-23 112.1 366 29.2
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 1.6e-22 110.9 358 31.0
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 1.6e-22 110.9 377 30.2
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 2.0e-22 110.5 346 34.1
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 3.5e-22 109.8 373 32.2
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 3.5e-22 109.8 375 28.0
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 3.8e-21 106.3 358 30.7
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 1.5e-20 104.4 333 30.9
MD03G1043100 Malus domestica HOM05D003079 ORTHO05D003461 1.5e-20 104.4 322 32.0
Oeu015272.1 Olea europaea HOM05D003079 ORTHO05D003461 2.5e-20 103.6 143 44.8
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 9.5e-20 101.7 373 29.2
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 9.5e-20 101.7 372 30.6
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 9.5e-20 101.7 362 28.5
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.8e-19 100.1 362 30.1
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.8e-19 100.1 362 30.1
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 2.8e-19 100.1 363 28.1
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 3.6e-19 99.8 362 30.1
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 6.1e-19 99.0 359 29.5
Thhalv10024990m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 6.1e-19 99.0 291 35.4
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 8.0e-19 98.6 367 28.3
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 1.0e-18 98.2 367 28.9
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 1.0e-18 98.2 363 28.7
BolC1t02168H Brassica oleracea HOM05D003079 ORTHO05D003461 1.4e-18 97.8 284 32.4
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 1.8e-18 97.4 290 30.7
C01p22370 Brassica napus HOM05D003079 ORTHO05D003461 4.0e-18 96.3 287 32.4
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 4.0e-18 96.3 355 31.0
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 4.0e-18 96.3 273 29.7
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 6.8e-18 95.5 354 29.1
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 8.8e-18 95.1 369 30.4
BcaC09g50710 Brassica carinata HOM05D003079 ORTHO05D003461 1.2e-17 94.7 283 32.5
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 1.5e-17 94.4 318 29.2
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 1.5e-17 94.4 273 29.7
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.3e-16 91.3 376 26.6
AT4G26455 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 1.7e-16 90.9 287 32.4
A01p17700 Brassica napus HOM05D003079 ORTHO05D003461 1.7e-16 90.9 296 32.1
BraA01t01726Z Brassica rapa HOM05D003079 ORTHO05D003461 1.7e-16 90.9 296 32.1
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 1.7e-16 90.9 361 27.7
CARHR234020 Cardamine hirsuta HOM05D003079 ORTHO05D003461 2.2e-16 90.5 298 32.6
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 3.7e-16 89.7 343 29.4
BcaNung02417 Brassica carinata HOM05D003079 ORTHO05D003461 3.7e-16 89.7 295 31.9
Thhalv10013313m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 4.9e-16 89.4 350 28.3
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.9e-16 89.4 376 26.3
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 6.3e-16 89.0 376 27.7
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 1.4e-15 87.8 345 29.3
HPP92_007490 Vanilla planifolia HOM05D003079 ORTHO05D003461 3.1e-15 86.7 325 26.5
Sp7g24370 Schrenkiella parvula HOM05D003079 ORTHO05D003461 4.1e-15 86.3 299 32.8
HanXRQChr11g0335521 Helianthus annuus HOM05D003079 ORTHO05D003461 7.0e-15 85.5 318 29.2
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 9.2e-15 85.1 371 27.2
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 2.0e-14 84.0 366 27.0
AL7G26490 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 7.7e-14 82.0 287 31.7
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 1.7e-13 80.9 349 28.7
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 2.3e-13 80.5 363 28.1
TAR626G1036 Trochodendron aralioides HOM05D003079 ORTHO05D003461 6.6e-13 79.0 130 40.8
ATR0751G103 Amborella trichopoda HOM05D003079 ORTHO05D003461 1.1e-12 78.2 130 40.8
Aqoxy7G02327 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 1.1e-12 78.2 270 28.5
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 1.9e-12 77.4 352 26.7
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 2.5e-12 77.0 372 27.2
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 2.5e-12 77.0 376 27.4
Actinidia30351 Actinidia chinensis HOM05D003079 ORTHO05D003461 5.6e-12 75.9 204 32.8
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 5.6e-12 75.9 442 24.2
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 5.6e-12 75.9 137 37.2
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 7.3e-12 75.5 344 28.5
AUR62043120 Chenopodium quinoa HOM05D003079 ORTHO05D003461 7.3e-12 75.5 292 31.2
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 1.2e-11 74.7 369 26.8
CiPaw.12G142900 Carya illinoinensis HOM05D003079 ORTHO05D003461 1.2e-11 74.7 247 30.8
Os09g0481300 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 1.2e-11 74.7 246 28.9
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 1.2e-11 74.7 350 26.9
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 1.6e-11 74.3 339 27.4
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 2.1e-11 73.9 377 24.9
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 6.1e-11 72.4 350 27.4
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 1.4e-10 71.2 126 39.7
Oeu062673.1 Olea europaea HOM05D003079 ORTHO05D003461 1.8e-10 70.9 82 50.0
Peaxi162Scf00006g00810 Petunia axillaris HOM05D003079 ORTHO05D003461 3.0e-10 70.1 247 30.0
Os08g0497900 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 4.0e-10 69.7 244 28.3
unitig_21.g20258 Utricularia gibba HOM05D003079 ORTHO05D003461 8.9e-10 68.6 237 31.6
EL10Ac4g08434 Beta vulgaris HOM05D003079 ORTHO05D003461 3.4e-09 66.6 267 27.3
Actinidia03676 Actinidia chinensis HOM05D003079 ORTHO05D003461 7.5e-09 65.5 116 40.5
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 9.8e-09 65.1 124 38.7
ECA236G4881 Erigeron canadensis HOM05D003079 ORTHO05D003461 9.8e-09 65.1 266 28.2
Medtr8g070940 Medicago truncatula HOM05D003079 ORTHO05D003461 2.2e-08 63.9 297 24.9
COL.COLO4_07790 Corchorus olitorius HOM05D003079 ORTHO05D003461 4.9e-08 62.8 133 33.1
Zm00001eb316300 Zea mays HOM05D003079 ORTHO05D003461 6.4e-08 62.4 259 25.5
PGSC0003DMG400029886 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.1e-07 61.6 74 43.2
HPP92_022810 Vanilla planifolia HOM05D003079 ORTHO05D003461 1.8e-07 60.8 307 24.1
Aa31LG8G580 Aethionema arabicum HOM05D003079 ORTHO05D003461 2.4e-07 60.5 292 26.7
Zm00001eb101670 Zea mays HOM05D003079 ORTHO05D003461 2.4e-07 60.5 239 25.1
unitig_744.g24499 Utricularia gibba HOM05D003079 ORTHO05D003461 9.2e-07 58.5 279 29.7
vmacro09028 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 2.7e-06 57.0 74 45.9
Thhalv10020643m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 5.9e-06 55.8 297 26.3


User provided reference genes

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