Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 1.8e-34 148.7 74 100.0
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 2.3e-21 105.1 59 84.7
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 8.7e-21 103.2 59 84.7
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 1.1e-20 102.8 59 83.1
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 5.6e-20 100.5 80 66.2
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 3.6e-19 97.8 80 65.0
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 3.6e-19 97.8 58 79.3
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 3.6e-19 97.8 56 82.1
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 4.0e-18 94.4 70 68.6
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 1.2e-17 92.8 70 64.3
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 3.8e-16 87.8 59 72.9
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 1.1e-15 86.3 53 79.2
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 2.4e-15 85.1 71 59.2
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 4.2e-15 84.3 70 57.1
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 5.4e-15 84.0 61 63.9
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 9.3e-15 83.2 58 72.4
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 1.2e-14 82.8 78 56.4
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 1.2e-14 82.8 55 70.9
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.6e-14 82.4 73 56.2
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.6e-14 82.4 60 70.0
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 1.6e-14 82.4 73 56.2
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 2.1e-14 82.0 72 61.1
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.1e-14 82.0 60 68.3
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 2.7e-14 81.6 59 71.2
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 3.5e-14 81.3 48 79.2
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 6.0e-14 80.5 60 68.3
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 7.9e-14 80.1 57 63.2
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 7.9e-14 80.1 73 54.8
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.0e-13 79.7 59 67.8
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.8e-13 79.0 58 70.7
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 3.9e-13 77.8 90 50.0
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 8.7e-13 76.6 60 63.3
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 8.7e-13 76.6 57 63.2
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.1e-12 76.3 65 61.5
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 1.1e-12 76.3 66 60.6
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 1.9e-12 75.5 68 55.9
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 2.5e-12 75.1 70 55.7
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 4.3e-12 74.3 76 53.9
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 4.3e-12 74.3 59 64.4
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 4.3e-12 74.3 69 58.0
MELO3C024405.2 Cucumis melo HOM05D008135 ORTHO05D010260 7.4e-12 73.6 59 62.7
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 9.6e-12 73.2 72 54.2
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 1.6e-11 72.4 59 66.1
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 2.1e-11 72.0 69 50.7
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 2.1e-11 72.0 68 52.9
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 2.1e-11 72.0 62 61.3
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 3.7e-11 71.2 59 61.0
Atru.chr1.3625 Acer truncatum HOM05D008135 ORTHO05D010260 1.4e-10 69.3 72 56.9
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 1.4e-10 69.3 67 55.2
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 1.8e-10 68.9 53 62.3
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 6.9e-10 67.0 55 61.8
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 6.9e-10 67.0 63 55.6
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 9.0e-10 66.6 61 59.0
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 2.6e-09 65.1 61 59.0
Lj3g0018742 Lotus japonicus HOM05D008135 ORTHO05D010260 3.4e-09 64.7 71 53.5
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 4.5e-09 64.3 58 55.2
Lalb_Chr25g0280561 Lupinus albus HOM05D008135 ORTHO05D010260 5.8e-09 63.9 59 52.5
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 5.8e-09 63.9 67 52.2
Sed0004354 Sechium edule HOM05D008135 ORTHO05D010260 1.7e-08 62.4 60 56.7
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 1.9e-07 58.9 61 50.8
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 5.5e-07 57.4 55 58.2
Aqoxy2G03851 Aquilegia oxysepala HOM05D008135 ORTHO05D010260 3.5e-06 54.7 56 55.4
Sc12g0009960 Simmondsia chinensis HOM05D008135 ORTHO05D010260 4.6e-06 54.3 48 56.2


User provided reference genes

Program Settings