Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052756.1 Olea europaea HOM05D009561 ORTHO05D003092 1.8e-227 792.3 432 100.0
Dinv41472 Davidia involucrata HOM05D003107 ORTHO05D003092 8.6e-52 208.8 511 33.3
Peaxi162Scf00088g01215 Petunia axillaris HOM05D009561 ORTHO05D003092 1.8e-49 201.1 502 34.7
CAN.G763.8 Capsicum annuum HOM05D009561 ORTHO05D003092 6.3e-47 192.6 495 34.1
Nitab4.5_0000374g0120 Nicotiana tabacum HOM05D009561 ORTHO05D003092 2.0e-45 187.6 476 35.5
Nitab4.5_0003393g0030 Nicotiana tabacum HOM05D009561 ORTHO05D003092 5.8e-40 169.5 406 36.5
CiPaw.03G248900 Carya illinoinensis HOM05D003107 ORTHO05D003092 1.5e-35 154.8 507 29.0
CSS0015137 Camellia sinensis var. sinensis HOM05D009561 ORTHO05D003092 7.3e-35 152.5 456 32.7
Rhsim01G0061100 Rhododendron simsii HOM05D003107 ORTHO05D003092 1.2e-34 151.8 493 30.8
CSS0017448 Camellia sinensis var. sinensis HOM05D009561 ORTHO05D003092 5.2e-33 146.4 468 32.1
Haze_25496 Corylus avellana HOM05D009561 ORTHO05D003092 5.2e-33 146.4 519 28.5
Manes.06G046500 Manihot esculenta HOM05D003107 ORTHO05D003092 8.9e-33 145.6 517 29.8
Solyc07g007840.3 Solanum lycopersicum HOM05D009561 ORTHO05D003092 2.6e-32 144.1 483 32.3
Sopen07g003740 Solanum pennellii HOM05D009561 ORTHO05D003092 5.8e-32 142.9 483 32.1
Thecc.09G133300 Theobroma cacao HOM05D003107 ORTHO05D003092 7.5e-32 142.5 513 29.4
vmacro07728 Vaccinium macrocarpon HOM05D003107 ORTHO05D003092 9.8e-32 142.1 492 27.8
Hma1.2p1_0497F.1_g166410 Hydrangea macrophylla HOM05D003107 ORTHO05D003092 1.3e-31 141.7 310 33.9
TAR636G3294 Trochodendron aralioides HOM05D003107 ORTHO05D003092 1.3e-31 141.7 575 28.3
GSVIVG01015600001 Vitis vinifera HOM05D009561 ORTHO05D003092 2.2e-31 141.0 320 33.1
QL02p089967 Quercus lobata HOM05D003107 ORTHO05D003092 3.7e-31 140.2 517 29.4
Nn8g39562 Nelumbo nucifera HOM05D003107 ORTHO05D003092 1.9e-30 137.9 516 27.7
Duzib187G1951 Durio zibethinus HOM05D003107 ORTHO05D003092 9.2e-30 135.6 513 27.3
Cpa.g.sc46.47 Carica papaya HOM05D003107 ORTHO05D003092 1.2e-29 135.2 301 33.6
Gorai.010G061400 Gossypium raimondii HOM05D003107 ORTHO05D003092 3.9e-28 130.2 254 35.4
Gohir.A06G053600 Gossypium hirsutum HOM05D003107 ORTHO05D003092 5.1e-28 129.8 403 29.5
Sabra18G0106800 Salix brachista HOM05D003107 ORTHO05D003092 5.1e-28 129.8 509 30.3
Cfa002924 Carpinus fangiana HOM05D003107 ORTHO05D003092 6.6e-28 129.4 286 35.0
Gohir.D06G052900 Gossypium hirsutum HOM05D003107 ORTHO05D003092 8.6e-28 129.0 397 29.7
Potri.018G125500 Populus trichocarpa HOM05D003107 ORTHO05D003092 1.1e-27 128.6 330 33.0
Potri.T125307 Populus trichocarpa HOM05D003107 ORTHO05D003092 5.6e-27 126.3 330 32.7
AUR62011180 Chenopodium quinoa HOM05D003107 ORTHO05D003092 5.2e-25 119.8 289 30.4
AUR62013303 Chenopodium quinoa HOM05D003107 ORTHO05D003092 2.2e-23 114.4 288 31.2
Aqoxy7G03629 Aquilegia oxysepala HOM05D003107 ORTHO05D003092 6.4e-23 112.8 273 33.0
ECA234G1222 Erigeron canadensis HOM05D003107 ORTHO05D003092 7.1e-22 109.4 371 29.1
ATR0800G121 Amborella trichopoda HOM05D003107 ORTHO05D003092 1.0e-20 105.5 278 29.5
Ciclev10007677m.g Citrus clementina HOM05D003107 ORTHO05D003092 3.0e-20 104.0 281 31.7
HanXRQChr12g0356791 Helianthus annuus HOM05D003107 ORTHO05D003092 2.5e-19 100.9 67 62.7
HPP92_010519 Vanilla planifolia HOM05D003107 ORTHO05D003092 2.5e-19 100.9 77 55.8
Sc18g0000310 Simmondsia chinensis HOM05D003107 ORTHO05D003092 3.3e-19 100.5 417 28.1
Lalb_Chr08g0234601 Lupinus albus HOM05D003107 ORTHO05D003092 5.6e-19 99.8 479 25.5
Ah.09g224690 Amaranthus hybridus HOM05D009561 ORTHO05D003092 2.1e-18 97.8 66 62.1
Lsat_1_v5_gn_5_93901 Lactuca sativa HOM05D003107 ORTHO05D003092 5.2e-17 93.2 400 26.0
ATR0772G192 Amborella trichopoda HOM05D009561 ORTHO05D003092 8.9e-17 92.4 320 26.6
Actinidia07321 Actinidia chinensis HOM05D003107 ORTHO05D003092 1.5e-16 91.7 407 27.5
Lj6g0021163 Lotus japonicus HOM05D003107 ORTHO05D003092 7.6e-16 89.4 78 51.3
CDE04G1135 Ceratophyllum demersum HOM05D003107 ORTHO05D003092 2.2e-15 87.8 68 52.9
SHI33553 Sapria himalayana HOM05D014003 ORTHO05D016381 1.1e-14 85.5 61 60.7
Os04g0644675 Oryza sativa ssp. japonica HOM05D003107 ORTHO05D003092 4.2e-14 83.6 68 50.0
TPR.G9542 Trifolium pratense HOM05D003107 ORTHO05D003092 3.0e-12 77.4 68 50.0
Psat1g127320 Pisum sativum HOM05D009561 ORTHO05D003092 1.9e-11 74.7 70 48.6
Medtr6g033205 Medicago truncatula HOM05D009561 ORTHO05D003092 2.1e-10 71.2 68 51.5
SHI25697 Sapria himalayana HOM05D009561 ORTHO05D003092 1.8e-09 68.2 48 64.6
AagrBONN_evm.TU.Sc2ySwM_344.4237 Anthoceros agrestis HOM05D003107 ORTHO05D003092 2.4e-09 67.8 72 47.2
Psat1g024000 Pisum sativum HOM05D003107 ORTHO05D003092 5.3e-09 66.6 68 41.2
SHI41186 Sapria himalayana HOM05D009561 ORTHO05D003092 6.9e-09 66.2 52 55.8
QL02p090018 Quercus lobata HOM05D009561 ORTHO05D003092 4.4e-08 63.5 113 34.5
SHI41184 Sapria himalayana HOM05D009561 ORTHO05D003092 1.7e-07 61.6 56 51.8
Psat1g023960 Pisum sativum HOM05D003107 ORTHO05D003092 8.4e-07 59.3 68 36.8
arahy.Tifrunner.gnm1.ann1.8TMD5Z Arachis hypogaea HOM05D003107 ORTHO05D003092 1.4e-06 58.5 72 38.9
Aqoxy1G02257 Aquilegia oxysepala HOM05D003107 ORTHO05D003092 4.2e-06 57.0 68 41.2
vmacro05445 Vaccinium macrocarpon HOM05D003107 ORTHO05D003092 4.2e-06 57.0 72 43.1
arahy.Tifrunner.gnm1.ann1.YCI793 Arachis hypogaea HOM05D003107 ORTHO05D003092 5.4e-06 56.6 72 37.5
VMungo1309G0300 Vigna mungo HOM05D003107 ORTHO05D003092 7.1e-06 56.2 70 38.6
Cfa013207 Carpinus fangiana HOM05D003107 ORTHO05D003092 9.3e-06 55.8 70 40.0
Ca_15699_v3 Cicer arietinum L. HOM05D003107 ORTHO05D003092 9.3e-06 55.8 77 37.7
Haze_21621 Corylus avellana HOM05D003107 ORTHO05D003092 9.3e-06 55.8 70 40.0
Psat5g027640 Pisum sativum HOM05D003107 ORTHO05D003092 9.3e-06 55.8 68 39.7


User provided reference genes

Program Settings