Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052694.1 Olea europaea HOM05D006462 ORTHO05D008067 1.1e-74 283.1 139 100.0
Dinv10269 Davidia involucrata HOM05D006462 ORTHO05D008067 4.6e-31 138.3 129 58.1
CSS0006730 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 1.4e-27 126.7 127 59.1
Lj2A355G32 Lonicera japonica HOM05D006462 ORTHO05D008067 2.0e-26 122.9 128 53.9
MSTRG.14813 Avicennia marina HOM05D006462 ORTHO05D008067 3.4e-26 122.1 133 52.6
Manes.16G054132 Manihot esculenta HOM05D006462 ORTHO05D008067 1.3e-25 120.2 129 53.5
COL.COLO4_30938 Corchorus olitorius HOM05D006462 ORTHO05D008067 3.7e-25 118.6 136 51.5
Hma1.2p1_0365F.1_g136800 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 3.7e-25 118.6 131 52.7
Hma1.2p1_0365F.1_g136810 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 3.7e-25 118.6 131 52.7
SGA_v2.0_scaffold51G18669 Striga asiatica HOM05D006462 ORTHO05D008067 4.9e-25 118.2 129 51.9
Migut.H01302 Erythranthe guttata HOM05D006462 ORTHO05D008067 6.4e-25 117.9 135 53.3
Rhsim13G0127700 Rhododendron simsii HOM05D006462 ORTHO05D008067 1.4e-24 116.7 127 54.3
Gorai.011G050700 Gossypium raimondii HOM05D006462 ORTHO05D008067 2.4e-24 115.9 132 52.3
PGSC0003DMG400021145 Solanum tuberosum HOM05D006462 ORTHO05D008067 2.4e-24 115.9 125 55.2
QL03p039440 Quercus lobata HOM05D006462 ORTHO05D008067 5.4e-24 114.8 133 51.9
Solyc02g069410.4 Solanum lycopersicum HOM05D006462 ORTHO05D008067 1.2e-23 113.6 129 53.5
Sopen02g018560 Solanum pennellii HOM05D006462 ORTHO05D008067 1.2e-23 113.6 129 53.5
CSS0015214 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 1.6e-23 113.2 58 91.4
Nitab4.5_0011847g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 2.7e-23 112.5 130 54.6
TWI73G0634 Tripterygium wilfordii HOM05D006462 ORTHO05D008067 2.7e-23 112.5 130 49.2
Haze_10391 Corylus avellana HOM05D006462 ORTHO05D008067 4.6e-23 111.7 92 64.1
Eucgr.D01035 Eucalyptus grandis HOM05D006462 ORTHO05D008067 4.6e-23 111.7 117 54.7
SalBow7G1415 Salvia bowleyana HOM05D006462 ORTHO05D008067 4.6e-23 111.7 143 49.0
Duzib235G0723 Durio zibethinus HOM05D006462 ORTHO05D008067 6.0e-23 111.3 134 50.7
Nitab4.5_0005250g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 1.0e-22 110.5 131 54.2
FAN21G3298 Fragaria x ananassa HOM05D006462 ORTHO05D008067 1.3e-22 110.2 124 52.4
RcHm_v2.0_Chr5g0019301 Rosa chinensis HOM05D006462 ORTHO05D008067 1.7e-22 109.8 123 52.8
Cfa004797 Carpinus fangiana HOM05D006462 ORTHO05D008067 3.0e-22 109.0 93 62.4
FvH4_3g11870 Fragaria vesca HOM05D006462 ORTHO05D008067 3.9e-22 108.6 122 52.5
MD10G1238000 Malus domestica HOM05D006462 ORTHO05D008067 1.1e-21 107.1 119 50.4
Prupe.4G106200 Prunus persica HOM05D006462 ORTHO05D008067 1.1e-21 107.1 122 52.5
Atru.chr10.574 Acer truncatum HOM05D006462 ORTHO05D008067 1.5e-21 106.7 112 50.9
Cc09_g06660 Coffea canephora HOM05D006462 ORTHO05D008067 1.5e-21 106.7 72 70.8
RcHm_v2.0_Chr5g0019331 Rosa chinensis HOM05D006462 ORTHO05D008067 1.5e-21 106.7 127 52.0
Sabra15G0134200 Salix brachista HOM05D006462 ORTHO05D008067 1.5e-21 106.7 131 47.3
FAN16G0781 Fragaria x ananassa HOM05D006462 ORTHO05D008067 2.5e-21 105.9 129 50.4
Lsat_1_v5_gn_8_117040 Lactuca sativa HOM05D006462 ORTHO05D008067 5.6e-21 104.8 77 68.8
Nn7g38003 Nelumbo nucifera HOM05D006462 ORTHO05D008067 1.6e-20 103.2 129 48.8
Ciclev10015603m.g Citrus clementina HOM05D006462 ORTHO05D008067 2.1e-20 102.8 112 52.7
MD10G1237500 Malus domestica HOM05D006462 ORTHO05D008067 2.8e-20 102.4 132 44.7
Cpa.g.sc192.4 Carica papaya HOM05D006462 ORTHO05D008067 3.6e-20 102.1 123 48.8
CiPaw.09G151400 Carya illinoinensis HOM05D006462 ORTHO05D008067 4.7e-20 101.7 113 50.4
CsaV3_6G052750 Cucumis sativus L. HOM05D006462 ORTHO05D008067 4.7e-20 101.7 133 46.6
PSO675G5440 Papaver somniferum HOM05D006462 ORTHO05D008067 4.7e-20 101.7 140 45.0
ClCG01G025490 Citrullus lanatus HOM05D006462 ORTHO05D008067 8.1e-20 100.9 132 47.7
MELO3C007035.2 Cucumis melo HOM05D006462 ORTHO05D008067 8.1e-20 100.9 132 47.7
CAN.G675.12 Capsicum annuum HOM05D006462 ORTHO05D008067 2.4e-19 99.4 133 48.1
GSVIVG01001717001 Vitis vinifera HOM05D006462 ORTHO05D008067 4.0e-19 98.6 127 47.2
CANSAT35G0316 Cannabis sativa HOM05D006462 ORTHO05D008067 5.2e-19 98.2 97 54.6
PSO675G4077 Papaver somniferum HOM05D006462 ORTHO05D008067 5.2e-19 98.2 100 54.0
FAN25G3296 Fragaria x ananassa HOM05D006462 ORTHO05D008067 6.8e-19 97.8 91 58.2
vmacro03491 Vaccinium macrocarpon HOM05D006462 ORTHO05D008067 1.2e-18 97.1 154 42.2
MD10G1237600 Malus domestica HOM05D006462 ORTHO05D008067 1.5e-18 96.7 119 45.4
AUR62043004 Chenopodium quinoa HOM05D006462 ORTHO05D008067 2.6e-18 95.9 129 43.4
ECA232G4418 Erigeron canadensis HOM05D006462 ORTHO05D008067 4.4e-18 95.1 61 72.1
Potri.015G112500 Populus trichocarpa HOM05D006462 ORTHO05D008067 5.8e-18 94.7 85 56.5
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 7.6e-18 94.4 59 69.5
ATR0763G016 Amborella trichopoda HOM05D006462 ORTHO05D008067 9.9e-18 94.0 64 68.8
VMungo0540G1781 Vigna mungo HOM05D006462 ORTHO05D008067 9.9e-18 94.0 104 51.0
PGR083G2188 Punica granatum HOM05D006462 ORTHO05D008067 2.2e-17 92.8 95 56.8
THA.LOC104812900 Tarenaya hassleriana HOM05D006462 ORTHO05D008067 2.2e-17 92.8 106 53.8
Phvul.006G130700 Phaseolus vulgaris HOM05D006462 ORTHO05D008067 2.9e-17 92.4 87 56.3
Sc16g0001760 Simmondsia chinensis HOM05D006462 ORTHO05D008067 8.4e-17 90.9 50 84.0
Aqoxy4G00016 Aquilegia oxysepala HOM05D006462 ORTHO05D008067 1.4e-16 90.1 47 85.1
Ca_00797_v3 Cicer arietinum L. HOM05D006462 ORTHO05D008067 1.4e-16 90.1 77 58.4
arahy.Tifrunner.gnm1.ann1.2J20F7 Arachis hypogaea HOM05D006462 ORTHO05D008067 2.4e-16 89.4 76 60.5
arahy.Tifrunner.gnm1.ann1.CJL35W Arachis hypogaea HOM05D006462 ORTHO05D008067 2.4e-16 89.4 76 60.5
Os12g0630700 Oryza sativa ssp. japonica HOM05D006462 ORTHO05D008067 4.2e-16 88.6 50 80.0
arahy.Tifrunner.gnm1.ann1.CQ0UNW Arachis hypogaea HOM05D000112 ORTHO05D008067 7.1e-16 87.8 65 61.5
Lalb_Chr15g0088641 Lupinus albus HOM05D006462 ORTHO05D008067 7.1e-16 87.8 50 76.0
TAR627G0872 Trochodendron aralioides HOM05D006462 ORTHO05D008067 7.1e-16 87.8 109 50.5
Aa31LG9G7960 Aethionema arabicum HOM05D006462 ORTHO05D008067 1.2e-15 87.0 120 51.7
HanXRQChr04g0115281 Helianthus annuus HOM05D006462 ORTHO05D008067 1.2e-15 87.0 90 51.1
Glyma.09G021500 Glycine max HOM05D006462 ORTHO05D008067 3.5e-15 85.5 50 78.0
EL10Ac8g19520 Beta vulgaris HOM05D006462 ORTHO05D008067 6.0e-15 84.7 114 48.2
Glyma.15G127800 Glycine max HOM05D006462 ORTHO05D008067 1.7e-14 83.2 94 47.9
unitig_21.g20206 Utricularia gibba HOM05D006462 ORTHO05D008067 1.7e-14 83.2 123 45.5
AL8G14020 Arabidopsis lyrata HOM05D006462 ORTHO05D008067 2.3e-14 82.8 84 57.1
BcaC06g34485 Brassica carinata HOM05D006462 ORTHO05D008067 2.3e-14 82.8 59 64.4
C07p27950 Brassica napus HOM05D006462 ORTHO05D008067 2.3e-14 82.8 59 64.4
BolC7t43328H Brassica oleracea HOM05D006462 ORTHO05D008067 2.3e-14 82.8 59 64.4
Psat1g169320 Pisum sativum HOM05D006462 ORTHO05D008067 2.3e-14 82.8 102 46.1
CARHR177360 Cardamine hirsuta HOM05D006462 ORTHO05D008067 3.9e-14 82.0 73 57.5
A06p46730 Brassica napus HOM05D006462 ORTHO05D008067 5.1e-14 81.6 59 64.4
BraA06t27545Z Brassica rapa HOM05D006462 ORTHO05D008067 5.1e-14 81.6 59 64.4
Sp2g09990 Schrenkiella parvula HOM05D006462 ORTHO05D008067 8.7e-14 80.9 84 53.6
Carub.0008s0300 Capsella rubella HOM05D006462 ORTHO05D008067 2.5e-13 79.3 69 55.1
Medtr2g029350 Medicago truncatula HOM05D006462 ORTHO05D008067 2.5e-13 79.3 50 72.0
BcaC06g31570 Brassica carinata HOM05D006462 ORTHO05D008067 4.3e-13 78.6 59 62.7
AagrBONN_evm.TU.Sc2ySwM_117.1618 Anthoceros agrestis HOM05D006462 ORTHO05D008067 5.6e-13 78.2 51 68.6
AT5G45170 Arabidopsis thaliana HOM05D006462 ORTHO05D008067 5.6e-13 78.2 84 54.8
Lj6g0000446 Lotus japonicus HOM05D006462 ORTHO05D008067 5.6e-13 78.2 111 43.2
Pp3c10_270 Physcomitrium patens HOM05D006462 ORTHO05D008067 1.3e-12 77.0 60 55.0
Thhalv10000927m.g Eutrema salsugineum HOM05D006462 ORTHO05D008067 2.1e-12 76.3 52 67.3
CBR_g32011 Chara braunii HOM05D006462 ORTHO05D008067 2.2e-09 66.2 45 62.2
SEGI_41218 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 2.2e-09 66.2 48 60.4
DCAR_004313 Daucus carota HOM05D006462 ORTHO05D008067 4.9e-09 65.1 105 42.9
SEGI_23737 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 1.1e-08 63.9 38 73.7
Peaxi162Scf00195g00131 Petunia axillaris HOM05D006462 ORTHO05D008067 1.4e-08 63.5 52 67.3
TPR.G26539 Trifolium pratense HOM05D006462 ORTHO05D008067 1.9e-08 63.2 38 71.1
MBI18_g29620_MAGBIO Magnolia biondii HOM05D058980 ORTHO05D048595 1.3e-06 57.0 38 71.1
Mapoly0106s0006 Marchantia polymorpha HOM05D006462 ORTHO05D008067 2.3e-06 56.2 37 64.9


User provided reference genes

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