Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 1.5e-115 419.5 202 100.0
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 2.1e-53 213.0 151 64.9
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 1.5e-51 206.8 151 64.9
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 2.6e-51 206.1 153 64.1
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 9.9e-51 204.1 138 67.4
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.1e-48 196.4 181 55.2
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 4.6e-48 195.3 148 61.5
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 7.8e-48 194.5 157 58.6
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 7.8e-48 194.5 130 66.9
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 3.0e-47 192.6 151 60.9
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 6.6e-47 191.4 145 60.0
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.5e-46 190.3 151 60.3
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.9e-46 189.9 160 56.2
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 2.5e-46 189.5 155 58.7
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 3.3e-46 189.1 148 62.8
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.3e-46 189.1 146 59.6
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 4.3e-46 188.7 137 62.0
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 5.6e-46 188.3 128 66.4
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 5.6e-46 188.3 154 59.1
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 1.2e-45 187.2 145 59.3
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 4.7e-45 185.3 150 57.3
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 6.2e-45 184.9 128 65.6
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 3.1e-44 182.6 168 54.8
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 3.1e-44 182.6 150 56.7
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 4.0e-44 182.2 149 57.7
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 5.2e-44 181.8 139 59.7
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 4.4e-43 178.7 138 60.1
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 5.8e-43 178.3 150 54.7
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 9.9e-43 177.6 146 54.8
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 1.3e-42 177.2 135 62.2
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 1.7e-42 176.8 138 59.4
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.8e-42 175.6 135 62.2
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 3.8e-42 175.6 151 55.0
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 1.1e-41 174.1 150 53.3
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 1.9e-41 173.3 145 55.9
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.9e-41 173.3 150 56.7
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.9e-41 173.3 147 53.7
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 2.4e-41 172.9 128 62.5
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 5.4e-41 171.8 141 56.7
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 5.4e-41 171.8 135 61.5
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 7.1e-41 171.4 147 53.1
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 2.1e-40 169.9 145 55.9
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 2.1e-40 169.9 135 60.7
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 3.5e-40 169.1 140 55.0
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 6.0e-40 168.3 127 61.4
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 6.0e-40 168.3 132 57.6
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 7.8e-40 167.9 157 55.4
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 1.0e-39 167.5 150 52.7
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 1.0e-39 167.5 133 57.1
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.3e-39 167.2 130 58.5
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 2.3e-39 166.4 150 52.7
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 2.3e-39 166.4 150 52.7
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 2.3e-39 166.4 150 52.7
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 2.3e-39 166.4 124 61.3
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 3.0e-39 166.0 130 56.9
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 3.9e-39 165.6 129 57.4
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.9e-39 165.6 140 53.6
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 6.6e-39 164.9 150 51.3
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 8.7e-39 164.5 150 51.3
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 8.7e-39 164.5 130 56.2
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 1.1e-38 164.1 137 58.4
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.1e-38 164.1 132 57.6
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 1.1e-38 164.1 144 54.9
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.5e-38 163.7 150 52.0
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 2.5e-38 162.9 120 60.8
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 3.3e-38 162.5 130 54.6
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 3.3e-38 162.5 136 55.9
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 4.3e-38 162.2 145 51.7
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 9.6e-38 161.0 130 56.9
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 1.6e-37 160.2 136 55.9
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.6e-37 160.2 136 55.1
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.6e-37 160.2 136 55.1
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 1.6e-37 160.2 140 53.6
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 2.8e-37 159.5 160 51.2
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 3.6e-37 159.1 146 50.0
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 6.2e-37 158.3 139 53.2
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 8.1e-37 157.9 138 53.6
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 1.4e-36 157.1 136 53.7
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 4.0e-36 155.6 151 49.7
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 4.0e-36 155.6 139 52.5
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 4.0e-36 155.6 136 53.7
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 1.2e-35 154.1 128 53.9
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 1.2e-35 154.1 149 49.7
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 1.5e-35 153.7 132 53.0
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 1.5e-35 153.7 132 53.0
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 1.3e-34 150.6 155 48.4
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 2.9e-34 149.4 132 57.6
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 6.4e-34 148.3 151 47.7
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.1e-33 147.5 158 50.6
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 2.4e-33 146.4 151 43.7
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 9.3e-33 144.4 151 43.0
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 1.6e-32 143.7 123 54.5
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 2.1e-32 143.3 184 44.6
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 1.0e-31 141.0 137 53.3
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 6.6e-31 138.3 139 47.5
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 4.3e-30 135.6 93 66.7
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 2.9e-26 122.9 97 57.7
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.8e-26 122.5 98 56.1
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 4.9e-26 122.1 138 50.7
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 1.2e-24 117.5 143 43.4
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 7.9e-24 114.8 133 47.4
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 6.7e-23 111.7 197 34.5
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.9e-22 110.2 84 57.1
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 5.6e-22 108.6 129 41.1
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 3.7e-21 105.9 147 40.1
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 1.1e-20 104.4 75 64.0
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.8e-20 103.6 82 58.5
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 4.0e-20 102.4 118 40.7
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 9.0e-20 101.3 151 35.8
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 6.9e-12 75.1 151 33.1
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 1.2e-11 74.3 75 52.0
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 1.5e-11 73.9 125 36.0
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 2.0e-11 73.6 95 36.8
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 8.4e-10 68.2 47 61.7
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 1.1e-09 67.8 166 30.1
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.7e-08 63.2 77 46.8
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 7.9e-08 61.6 118 30.5
Cfa003473 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.9e-06 57.0 32 71.9


User provided reference genes

Program Settings