Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052621.2 Olea europaea HOM05D003781 ORTHO05D004299 1.5e-164 582.8 290 100.0
Oeu034092.2 Olea europaea HOM05D003781 ORTHO05D004299 2.4e-138 495.7 287 86.4
Migut.J00706 Erythranthe guttata HOM05D003781 ORTHO05D004299 1.6e-102 376.7 285 66.7
MSTRG.5897 Avicennia marina HOM05D003781 ORTHO05D004299 6.1e-102 374.8 286 65.4
SGA_v2.0_scaffold13G06629 Striga asiatica HOM05D003781 ORTHO05D004299 2.5e-100 369.4 286 65.7
Dinv12337 Davidia involucrata HOM05D003781 ORTHO05D004299 9.7e-100 367.5 283 65.0
Dinv31756 Davidia involucrata HOM05D003781 ORTHO05D004299 6.3e-99 364.8 291 62.2
Nitab4.5_0001122g0140 Nicotiana tabacum HOM05D003781 ORTHO05D004299 9.0e-98 360.9 286 62.2
Cc06_g06510 Coffea canephora HOM05D003781 ORTHO05D004299 2.0e-97 359.8 277 65.0
Nitab4.5_0000020g0070 Nicotiana tabacum HOM05D003781 ORTHO05D004299 5.0e-96 355.1 279 62.7
Peaxi162Scf00586g00012 Petunia axillaris HOM05D003781 ORTHO05D004299 5.0e-96 355.1 283 63.3
PGSC0003DMG400021351 Solanum tuberosum HOM05D003781 ORTHO05D004299 2.5e-95 352.8 282 62.1
Actinidia03891 Actinidia chinensis HOM05D003781 ORTHO05D004299 7.2e-95 351.3 273 63.0
Actinidia04001 Actinidia chinensis HOM05D003781 ORTHO05D004299 7.2e-95 351.3 273 63.0
CAN.G170.93 Capsicum annuum HOM05D003781 ORTHO05D004299 1.8e-93 346.7 289 60.2
Solyc01g007160.4 Solanum lycopersicum HOM05D003781 ORTHO05D004299 1.8e-93 346.7 282 59.9
SalBow8G0162 Salvia bowleyana HOM05D003781 ORTHO05D004299 3.9e-93 345.5 286 60.5
Sopen01g003140 Solanum pennellii HOM05D003781 ORTHO05D004299 6.7e-93 344.7 285 60.0
Sopen01g052480 Solanum pennellii HOM05D003781 ORTHO05D004299 5.7e-92 341.7 285 60.0
Lsat_1_v5_gn_1_58161 Lactuca sativa HOM05D003781 ORTHO05D004299 2.8e-91 339.3 268 61.9
HanXRQChr01g0025751 Helianthus annuus HOM05D003781 ORTHO05D004299 3.7e-91 339.0 286 57.3
Lsat_1_v5_gn_6_113040 Lactuca sativa HOM05D003781 ORTHO05D004299 3.7e-91 339.0 270 62.2
DCAR_009179 Daucus carota HOM05D003781 ORTHO05D004299 8.2e-91 337.8 291 58.4
ECA248G2654 Erigeron canadensis HOM05D003781 ORTHO05D004299 3.1e-90 335.9 274 60.6
vmacro07475 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 3.4e-89 332.4 273 61.9
GSVIVG01029568001 Vitis vinifera HOM05D003781 ORTHO05D004299 1.3e-88 330.5 276 59.1
Solyc01g110330.3 Solanum lycopersicum HOM05D003781 ORTHO05D004299 2.2e-88 329.7 284 58.5
GSVIVG01037869001 Vitis vinifera HOM05D003781 ORTHO05D004299 2.2e-88 329.7 270 61.1
TAR636G1975 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.1e-87 327.4 280 58.6
AUR62036398 Chenopodium quinoa HOM05D003781 ORTHO05D004299 2.5e-87 326.2 272 58.5
Ciclev10012131m.g Citrus clementina HOM05D003781 ORTHO05D004299 5.5e-87 325.1 285 55.8
Duzib093G1220 Durio zibethinus HOM05D003781 ORTHO05D004299 5.5e-87 325.1 295 57.3
TAR633G0070 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.6e-86 323.6 273 59.0
Hund10883 Selenicereus undatus HOM05D003781 ORTHO05D004299 6.1e-86 321.6 258 59.3
AUR62030753 Chenopodium quinoa HOM05D003781 ORTHO05D004299 3.9e-85 318.9 289 55.0
Nn2g14295 Nelumbo nucifera HOM05D003781 ORTHO05D004299 5.2e-85 318.5 281 56.2
PGR142G3230 Punica granatum HOM05D003781 ORTHO05D004299 5.2e-85 318.5 261 57.5
Gohir.D09G131000 Gossypium hirsutum HOM05D003781 ORTHO05D004299 3.3e-84 315.8 285 56.8
Gorai.006G149700 Gossypium raimondii HOM05D003781 ORTHO05D004299 3.3e-84 315.8 285 56.8
TWI53G0607 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 4.4e-84 315.5 271 57.9
EL10Ac5g12476 Beta vulgaris HOM05D003781 ORTHO05D004299 7.4e-84 314.7 296 53.7
Potri.016G070800 Populus trichocarpa HOM05D003781 ORTHO05D004299 7.4e-84 314.7 272 58.1
HanXRQChr16g0532941 Helianthus annuus HOM05D003781 ORTHO05D004299 9.7e-84 314.3 269 57.6
Prupe.7G095100 Prunus persica HOM05D003781 ORTHO05D004299 1.7e-83 313.5 271 57.9
CsaV3_3G037920 Cucumis sativus L. HOM05D003781 ORTHO05D004299 2.8e-83 312.8 270 57.4
Atru.chr8.1371 Acer truncatum HOM05D003781 ORTHO05D004299 1.8e-82 310.1 268 57.5
Thecc.05G103800 Theobroma cacao HOM05D003781 ORTHO05D004299 1.8e-82 310.1 286 56.3
TWI74G1316 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 5.3e-82 308.5 272 56.6
Lalb_Chr18g0056351 Lupinus albus HOM05D003781 ORTHO05D004299 9.1e-82 307.8 268 55.6
Cpa.g.sc10.172 Carica papaya HOM05D003781 ORTHO05D004299 2.0e-81 306.6 285 53.7
MELO3C009536.2 Cucumis melo HOM05D003781 ORTHO05D004299 5.9e-81 305.1 270 56.3
MD14G1038400 Malus domestica HOM05D003781 ORTHO05D004299 5.9e-81 305.1 269 55.8
Sabra16G0070900 Salix brachista HOM05D003781 ORTHO05D004299 5.9e-81 305.1 281 56.2
Sabra16G0073100 Salix brachista HOM05D003781 ORTHO05D004299 5.9e-81 305.1 281 56.2
PSO541G6247 Papaver somniferum HOM05D003781 ORTHO05D004299 7.7e-81 304.7 270 55.6
PGR142G3605 Punica granatum HOM05D003781 ORTHO05D004299 1.7e-80 303.5 286 52.4
unitig_26.g10109 Utricularia gibba HOM05D003781 ORTHO05D004299 2.2e-80 303.1 275 58.2
PSO675G8110 Papaver somniferum HOM05D003781 ORTHO05D004299 2.9e-80 302.8 270 55.6
QL04p046781 Quercus lobata HOM05D003781 ORTHO05D004299 3.8e-80 302.4 272 56.6
CANSAT01G0129 Cannabis sativa HOM05D003781 ORTHO05D004299 5.0e-80 302.0 268 54.9
MD12G1039800 Malus domestica HOM05D003781 ORTHO05D004299 6.5e-80 301.6 295 53.2
Manes.08G033100 Manihot esculenta HOM05D003781 ORTHO05D004299 8.5e-80 301.2 271 53.9
Ah.04g152350 Amaranthus hybridus HOM05D003781 ORTHO05D000148 1.1e-79 300.8 273 55.7
QL04p047257 Quercus lobata HOM05D003781 ORTHO05D004299 1.5e-79 300.4 272 55.9
Sed0000357 Sechium edule HOM05D003781 ORTHO05D004299 1.5e-79 300.4 270 54.8
Lj1g0015362 Lotus japonicus HOM05D003781 ORTHO05D004299 1.9e-79 300.1 265 56.6
FvH4_6g20270 Fragaria vesca HOM05D003781 ORTHO05D004299 3.2e-79 299.3 266 56.8
QL07p036815 Quercus lobata HOM05D003781 ORTHO05D004299 4.2e-79 298.9 272 56.2
CiPaw.09G020700 Carya illinoinensis HOM05D003781 ORTHO05D004299 5.5e-79 298.5 271 56.5
FAN14G3039 Fragaria x ananassa HOM05D003781 ORTHO05D004299 5.5e-79 298.5 266 56.4
Actinidia31110 Actinidia chinensis HOM05D003781 ORTHO05D004299 1.2e-78 297.4 269 55.8
Hma1.2p1_0381F.1_g140000 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 1.6e-78 297.0 268 57.5
Aqoxy1G00670 Aquilegia oxysepala HOM05D003781 ORTHO05D004299 2.7e-78 296.2 273 55.7
arahy.Tifrunner.gnm1.ann1.WYX60D Arachis hypogaea HOM05D003781 ORTHO05D004299 6.1e-78 295.0 266 55.3
arahy.Tifrunner.gnm1.ann1.GQX3NW Arachis hypogaea HOM05D003781 ORTHO05D004299 1.0e-77 294.3 266 55.3
Hma1.2p1_0064F.1_g034690 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 2.3e-77 293.1 248 57.3
MBI04_g47396_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 2.3e-77 293.1 273 55.3
FAN02G2206 Fragaria x ananassa HOM05D003781 ORTHO05D004299 5.2e-77 292.0 266 56.4
Phvul.001G195300 Phaseolus vulgaris HOM05D003781 ORTHO05D004299 8.8e-77 291.2 265 54.0
RcHm_v2.0_Chr3g0475861 Rosa chinensis HOM05D003781 ORTHO05D004299 1.5e-76 290.4 266 56.4
Haze_20190 Corylus avellana HOM05D003781 ORTHO05D004299 2.6e-76 289.7 272 55.5
Thhalv10027115m.g Eutrema salsugineum HOM05D003781 ORTHO05D004299 3.3e-76 289.3 265 54.3
RcHm_v2.0_Chr1g0331051 Rosa chinensis HOM05D003781 ORTHO05D004299 3.3e-76 289.3 266 56.4
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 2.8e-75 286.2 268 54.5
CSS0048701 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 4.8e-75 285.4 271 53.5
MBI04_g43653_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 1.4e-74 283.9 297 51.9
Lj2A35G43 Lonicera japonica HOM05D003781 ORTHO05D004299 1.8e-74 283.5 269 53.9
Rhsim03G0064900 Rhododendron simsii HOM05D003781 ORTHO05D004299 2.4e-74 283.1 273 55.3
Sp7g29260 Schrenkiella parvula HOM05D003781 ORTHO05D004299 5.3e-74 282.0 266 54.5
THA.LOC104809956 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 9.1e-74 281.2 269 53.2
VMungo0464G1804 Vigna mungo HOM05D003781 ORTHO05D004299 9.1e-74 281.2 263 54.0
Eucgr.K02618 Eucalyptus grandis HOM05D003781 ORTHO05D004299 1.6e-73 280.4 226 57.1
FAN05G1631 Fragaria x ananassa HOM05D003781 ORTHO05D004299 2.0e-73 280.0 297 50.2
FAN05G5379 Fragaria x ananassa HOM05D003781 ORTHO05D004299 2.0e-73 280.0 297 50.2
VMungo1383G2961 Vigna mungo HOM05D003781 ORTHO05D004299 2.7e-73 279.6 261 52.1
Ca_03587_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 4.5e-73 278.9 265 53.6
FAN09G0267 Fragaria x ananassa HOM05D003781 ORTHO05D004299 7.7e-73 278.1 297 50.2
AT4G31400 Arabidopsis thaliana HOM05D003781 ORTHO05D004299 1.3e-72 277.3 264 53.0
A08p18640 Brassica napus HOM05D003781 ORTHO05D004299 8.5e-72 274.6 266 52.6
A03p60680 Brassica napus HOM05D003781 ORTHO05D004299 1.1e-71 274.2 267 53.2
Glyma.19G200100 Glycine max HOM05D003781 ORTHO05D004299 1.5e-71 273.9 265 54.0
BcaNung04576 Brassica carinata HOM05D003781 ORTHO05D004299 1.9e-71 273.5 267 53.2
BraA03t15109Z Brassica rapa HOM05D003781 ORTHO05D004299 2.5e-71 273.1 268 53.7
CARHR239280 Cardamine hirsuta HOM05D003781 ORTHO05D004299 7.2e-71 271.6 269 51.3
Glyma.19G199100 Glycine max HOM05D003781 ORTHO05D004299 7.2e-71 271.6 265 53.6
Haze_19697 Corylus avellana HOM05D003781 ORTHO05D004299 9.4e-71 271.2 269 54.6
ClCG10G018370 Citrullus lanatus HOM05D003781 ORTHO05D004299 1.2e-70 270.8 229 56.8
Nitab4.5_0002858g0040 Nicotiana tabacum HOM05D003781 ORTHO05D004299 2.1e-70 270.0 241 58.9
Medtr0036s0040 Medicago truncatula HOM05D003781 ORTHO05D004299 2.7e-70 269.6 265 51.7
BolC7t46313H Brassica oleracea HOM05D003781 ORTHO05D004299 6.1e-70 268.5 269 52.0
Psat5g299360 Pisum sativum HOM05D003781 ORTHO05D004299 6.1e-70 268.5 265 51.3
C07p58580 Brassica napus HOM05D003781 ORTHO05D004299 8.0e-70 268.1 268 52.2
Carub.0007s0916 Capsella rubella HOM05D003781 ORTHO05D004299 8.0e-70 268.1 267 50.9
Ca_17838_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 1.0e-69 267.7 265 52.1
Aa31LG2G18950 Aethionema arabicum HOM05D003781 ORTHO05D004299 1.8e-69 266.9 268 51.1
BraA08t33827Z Brassica rapa HOM05D003781 ORTHO05D004299 2.3e-69 266.5 269 52.0
C03p88000 Brassica napus HOM05D003781 ORTHO05D004299 4.0e-69 265.8 266 51.9
Lj1A1051T45 Lonicera japonica HOM05D003781 ORTHO05D004299 6.8e-69 265.0 248 52.4
Medtr2g102470 Medicago truncatula HOM05D003781 ORTHO05D004299 6.8e-69 265.0 263 51.0
CiPaw.10G017000 Carya illinoinensis HOM05D003781 ORTHO05D004299 1.5e-68 263.8 272 51.5
Rhsim09G0141200 Rhododendron simsii HOM05D003781 ORTHO05D004299 9.8e-68 261.2 317 44.5
BolC3t21111H Brassica oleracea HOM05D003781 ORTHO05D004299 1.7e-67 260.4 266 51.9
Sed0026509 Sechium edule HOM05D003781 ORTHO05D004299 1.7e-67 260.4 270 51.5
TPR.G37223 Trifolium pratense HOM05D003781 ORTHO05D004299 2.4e-66 256.5 254 51.6
CDE06G0061 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 9.1e-66 254.6 295 46.1
CDE08G1154 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 2.2e-64 250.0 279 47.0
Os04g0498900 Oryza sativa ssp. japonica HOM05D003781 ORTHO05D004299 2.2e-64 250.0 279 50.5
PSO675G6385 Papaver somniferum HOM05D003781 ORTHO05D004299 8.5e-64 248.1 216 56.0
Zm00001eb078400 Zea mays HOM05D003781 ORTHO05D004299 5.5e-63 245.4 272 47.8
vmacro10320 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 7.2e-63 245.0 235 48.5
RhsimUnG0138100 Rhododendron simsii HOM05D003781 ORTHO05D004299 1.2e-62 244.2 269 49.1
Zm00001eb078390 Zea mays HOM05D003781 ORTHO05D004299 1.6e-62 243.8 272 47.8
Zm00001eb078410 Zea mays HOM05D003781 ORTHO05D004299 1.6e-62 243.8 272 47.8
AL7G20660 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 2.8e-62 243.0 227 53.3
ATR0772G111 Amborella trichopoda HOM05D003781 ORTHO05D004299 8.0e-62 241.5 307 45.9
Nitab4.5_0008187g0010 Nicotiana tabacum HOM05D003781 ORTHO05D004299 3.0e-61 239.6 273 47.6
CSS0029856 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 5.2e-61 238.8 228 52.2
HPP92_023079 Vanilla planifolia HOM05D003781 ORTHO05D004299 3.4e-60 236.1 283 45.9
BcaB03g12691 Brassica carinata HOM05D003781 ORTHO05D004299 1.4e-58 230.7 226 50.9
BcaC01g01091 Brassica carinata HOM05D003781 ORTHO05D004299 9.2e-58 228.0 227 50.7
AUR62040627 Chenopodium quinoa HOM05D003781 ORTHO05D004299 1.5e-52 210.7 160 58.8
SEGI_09697 Sequoiadendron giganteum HOM05D003781 ORTHO05D004299 4.1e-50 202.6 313 38.0
Gohir.A09G134500 Gossypium hirsutum HOM05D003781 ORTHO05D004299 9.2e-50 201.4 272 45.6
THA.LOC104816619 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 7.8e-49 198.4 214 49.1
Cc02_g09440 Coffea canephora HOM05D003781 ORTHO05D004299 1.6e-46 190.7 259 40.2
Pp3c11_11100 Physcomitrium patens HOM05D003781 ORTHO05D004299 5.2e-45 185.7 303 37.0
ATR1127G225 Amborella trichopoda HOM05D003781 ORTHO05D004299 1.4e-42 177.6 243 42.0
BcaNung01523 Brassica carinata HOM05D003781 ORTHO05D004299 4.1e-42 176.0 207 45.9
Sc07g0006420 Simmondsia chinensis HOM05D003781 ORTHO05D004299 6.6e-40 168.7 145 51.7
HanXRQChr15g0472861 Helianthus annuus HOM05D003781 ORTHO05D004299 1.5e-39 167.5 134 50.7
SMO367G1200 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 2.8e-38 163.3 264 37.9
HanXRQChr03g0072391 Helianthus annuus HOM05D003781 ORTHO05D004299 6.8e-37 158.7 207 46.4
RhsimUnG0138400 Rhododendron simsii HOM05D003781 ORTHO05D004299 4.4e-36 156.0 181 48.1
SGA_v2.0_scaffold31G12848 Striga asiatica HOM05D003781 ORTHO05D004299 2.9e-35 153.3 132 57.6
SMO343G0088 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 1.1e-31 141.4 247 35.2
TPR.G33838 Trifolium pratense HOM05D003781 ORTHO05D004299 7.6e-28 128.6 165 47.3
AagrBONN_evm.TU.Sc2ySwM_228.4048 Anthoceros agrestis HOM05D003781 ORTHO05D004299 1.2e-25 121.3 448 24.6
ATR0772G001 Amborella trichopoda HOM05D003781 ORTHO05D004299 1.3e-24 117.9 160 48.8
Mapoly0033s0057 Marchantia polymorpha HOM05D003781 ORTHO05D004299 1.3e-24 117.9 139 41.7
Actinidia06046 Actinidia chinensis HOM05D003781 ORTHO05D004299 1.5e-23 114.4 63 77.8
PRCOL_00001992 Prasinoderma coloniale HOM05D003781 ORTHO05D004299 3.3e-23 113.2 283 29.3
Lsat_1_v5_gn_1_27721 Lactuca sativa HOM05D003781 ORTHO05D004299 1.6e-22 110.9 114 47.4
EL10Ac6g14086 Beta vulgaris HOM05D003781 ORTHO05D004299 3.6e-22 109.8 82 54.9
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 1.7e-19 100.9 201 33.8
AL1G32760 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 2.9e-19 100.1 90 52.2
SGA_v2.0_scaffold522G52710 Striga asiatica HOM05D003781 ORTHO05D004299 2.9e-19 100.1 115 47.0
MCO12G060 Micromonas commoda HOM05D003781 ORTHO05D004299 5.4e-18 95.9 290 27.6
CBR_g51231 Chara braunii HOM05D003781 ORTHO05D004299 7.1e-18 95.5 105 41.0
TAR629G3109 Trochodendron aralioides HOM05D003781 ORTHO05D004299 4.8e-14 82.8 101 45.5
Gohir.D04G105401 Gossypium hirsutum HOM05D003781 ORTHO05D004299 6.2e-14 82.4 80 48.8
Gorai.005G179000 Gossypium raimondii HOM05D003781 ORTHO05D004299 1.1e-13 81.6 80 47.5
TPR.G742 Trifolium pratense HOM05D003781 ORTHO05D004299 2.0e-12 77.4 91 45.1
CBR_g53714 Chara braunii HOM05D003781 ORTHO05D004299 2.6e-12 77.0 142 31.0
CBR_g53498 Chara braunii HOM05D003781 ORTHO05D004299 1.4e-10 71.2 76 51.3
Cre12.g542400 Chlamydomonas reinhardtii HOM05D003781 ORTHO05D004299 1.0e-08 65.1 120 30.8
MD10G1054000 Malus domestica HOM05D003781 ORTHO05D004299 6.7e-08 62.4 54 48.1
TPR.G38290 Trifolium pratense HOM05D010769 ORTHO05D011972 8.7e-08 62.0 55 47.3
TPR.G165 Trifolium pratense HOM05D003781 ORTHO05D004299 3.3e-07 60.1 56 44.6
Cfa017313 Carpinus fangiana HOM05D003781 ORTHO05D004299 4.8e-06 56.2 44 52.3


User provided reference genes

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