Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 1.9e-68 262.3 127 100.0
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 4.0e-42 174.9 135 64.4
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 6.9e-42 174.1 135 64.4
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 1.2e-41 173.3 132 64.4
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 3.4e-41 171.8 135 63.0
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 7.6e-41 170.6 135 62.2
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 7.6e-41 170.6 135 63.0
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 2.2e-40 169.1 135 60.7
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 2.9e-40 168.7 134 59.7
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 1.1e-39 166.8 135 63.0
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 1.4e-39 166.4 135 61.5
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 1.9e-39 166.0 135 61.5
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 3.2e-39 165.2 135 60.0
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 3.2e-39 165.2 135 60.7
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 4.2e-39 164.9 135 60.0
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 4.2e-39 164.9 134 61.2
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 4.2e-39 164.9 135 58.5
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 1.6e-38 162.9 135 58.5
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 2.1e-38 162.5 135 60.0
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 1.0e-37 160.2 134 59.7
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 1.3e-37 159.8 127 60.6
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 1.8e-37 159.5 135 57.8
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 2.3e-37 159.1 136 58.8
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 3.0e-37 158.7 135 59.3
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 3.9e-37 158.3 135 57.0
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 6.7e-37 157.5 135 58.5
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 1.3e-35 153.3 135 60.0
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 4.8e-35 151.4 135 60.0
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 8.1e-35 150.6 134 57.5
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 1.1e-34 150.2 135 56.3
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 1.5e-33 146.4 139 56.8
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 2.0e-33 146.0 138 56.5
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 2.2e-32 142.5 134 55.2
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 2.9e-32 142.1 139 55.4
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 4.9e-32 141.4 127 57.5
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 8.4e-32 140.6 139 56.1
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 1.1e-31 140.2 139 56.1
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 1.4e-31 139.8 139 55.4
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 1.4e-31 139.8 139 55.4
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 1.9e-31 139.4 139 55.4
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 1.9e-31 139.4 106 66.0
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 4.2e-31 138.3 172 44.8
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 7.1e-31 137.5 145 50.3
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 9.3e-31 137.1 130 54.6
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 2.7e-30 135.6 139 54.7
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 3.5e-30 135.2 135 51.1
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.5e-30 135.2 114 59.6
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 7.9e-30 134.0 124 57.3
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 1.8e-29 132.9 117 59.0
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 3.0e-29 132.1 139 53.2
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 3.0e-29 132.1 134 57.5
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 3.0e-29 132.1 132 53.8
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 1.1e-26 123.6 147 46.9
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 7.6e-25 117.5 135 48.1
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 3.8e-24 115.2 186 40.9
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 7.1e-23 110.9 126 50.0
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 1.2e-22 110.2 109 53.2
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.0e-21 107.1 191 38.2
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 1.3e-21 106.7 137 47.4
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 3.7e-19 98.6 125 47.2
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 1.1e-18 97.1 65 67.7
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 1.1e-18 97.1 61 72.1
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 1.1e-18 97.1 61 75.4
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 1.1e-18 97.1 61 72.1
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 1.4e-18 96.7 66 71.2
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 1.4e-18 96.7 63 69.8
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 2.4e-18 95.9 124 44.4
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 4.1e-18 95.1 61 72.1
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 1.0e-16 90.5 71 63.4
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 6.5e-16 87.8 61 67.2
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 1.4e-15 86.7 64 60.9
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 1.9e-15 86.3 163 33.7
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 1.9e-15 86.3 53 73.6
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 1.9e-15 86.3 77 55.8
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 5.5e-15 84.7 62 61.3
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 5.5e-15 84.7 61 65.6
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 2.1e-14 82.8 54 70.4
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 2.7e-14 82.4 75 54.7
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 6.1e-14 81.3 53 67.9
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 6.1e-14 81.3 64 59.4
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.8e-13 79.7 61 62.3
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 2.3e-13 79.3 137 35.8
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 2.3e-13 79.3 62 59.7
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 4.8e-11 71.6 56 57.1
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 5.3e-10 68.2 54 55.6
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 6.9e-10 67.8 65 50.8
Gohir.A12G120600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 3.4e-09 65.5 66 54.5
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 5.9e-09 64.7 48 62.5
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 2.2e-08 62.8 48 60.4
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 5.0e-08 61.6 62 51.6
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 6.5e-08 61.2 62 50.0
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 6.5e-08 61.2 55 54.5
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 7.2e-07 57.8 65 50.8
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 7.2e-07 57.8 79 45.6
TAR365G0305 Trochodendron aralioides HOM05D007572 ORTHO05D009535 1.6e-06 56.6 56 50.0
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 6.1e-06 54.7 136 30.9


User provided reference genes

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