Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052534.1 Olea europaea HOM05D000748 ORTHO05D000394 2.9e-73 278.5 141 100.0
Oeu019137.1 Olea europaea HOM05D000748 ORTHO05D000394 1.6e-28 129.8 140 50.7
Sed0012708 Sechium edule HOM05D000748 ORTHO05D000394 9.1e-19 97.4 126 42.1
Migut.L00943 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.2e-18 97.1 136 39.7
Migut.K01187 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.5e-18 96.7 136 39.7
SGA_v2.0_scaffold40G15636 Striga asiatica HOM05D015389 ORTHO05D000394 5.0e-17 91.7 122 37.7
Aa31LG1G21000 Aethionema arabicum HOM05D000748 ORTHO05D000394 1.1e-16 90.5 122 44.3
Cpa.g.sc34.161 Carica papaya HOM05D000748 ORTHO05D000394 1.9e-16 89.7 119 41.2
ClCG07G002920 Citrullus lanatus HOM05D000748 ORTHO05D000394 1.9e-16 89.7 123 39.8
TAR629G2208 Trochodendron aralioides HOM05D000748 ORTHO05D000394 2.5e-16 89.4 121 42.1
Migut.O00422 Erythranthe guttata HOM05D015389 ORTHO05D000394 9.4e-16 87.4 136 37.5
MELO3C018737.2 Cucumis melo HOM05D000748 ORTHO05D000394 1.2e-15 87.0 123 38.2
CsaV3_7G004420 Cucumis sativus L. HOM05D000748 ORTHO05D000394 2.1e-15 86.3 123 38.2
AL6G49360 Arabidopsis lyrata HOM05D000748 ORTHO05D000394 2.7e-15 85.9 119 40.3
AT4G03540 Arabidopsis thaliana HOM05D000748 ORTHO05D000394 2.7e-15 85.9 119 40.3
BcaB01g01904 Brassica carinata HOM05D000748 ORTHO05D000394 3.6e-15 85.5 119 39.5
CARHR003030 Cardamine hirsuta HOM05D000748 ORTHO05D000394 3.6e-15 85.5 122 40.2
THA.LOC104815961 Tarenaya hassleriana HOM05D000748 ORTHO05D000394 3.6e-15 85.5 139 36.7
Migut.L00939 Erythranthe guttata HOM05D015389 ORTHO05D000394 4.7e-15 85.1 106 42.5
Migut.O00489 Erythranthe guttata HOM05D015389 ORTHO05D000394 4.7e-15 85.1 106 42.5
Thhalv10029027m.g Eutrema salsugineum HOM05D000748 ORTHO05D000394 4.7e-15 85.1 119 40.3
A09p02820 Brassica napus HOM05D000748 ORTHO05D000394 6.1e-15 84.7 119 38.7
BraA09t35923Z Brassica rapa HOM05D000748 ORTHO05D000394 6.1e-15 84.7 119 38.7
CARHR251970 Cardamine hirsuta HOM05D000748 ORTHO05D000394 6.1e-15 84.7 119 40.3
MD17G1240500 Malus domestica HOM05D000748 ORTHO05D000394 6.1e-15 84.7 136 36.8
C09p02900 Brassica napus HOM05D000748 ORTHO05D000394 7.9e-15 84.3 119 38.7
BolC9t53215H Brassica oleracea HOM05D000748 ORTHO05D000394 7.9e-15 84.3 119 38.7
Carub.0006s3353 Capsella rubella HOM05D000748 ORTHO05D000394 7.9e-15 84.3 137 35.8
Gohir.A09G216900 Gossypium hirsutum HOM05D000748 ORTHO05D000394 7.9e-15 84.3 121 43.8
Medtr0004s0210 Medicago truncatula HOM05D000748 ORTHO05D000394 7.9e-15 84.3 136 37.5
BolC5t28984H Brassica oleracea HOM05D000748 ORTHO05D000394 1.0e-14 84.0 122 41.0
Sp6g03550 Schrenkiella parvula HOM05D000748 ORTHO05D000394 1.0e-14 84.0 119 39.5
AL1G13190 Arabidopsis lyrata HOM05D000748 ORTHO05D000394 1.4e-14 83.6 122 39.3
AT1G03700 Arabidopsis thaliana HOM05D000748 ORTHO05D000394 1.4e-14 83.6 122 39.3
BcaB02g06910 Brassica carinata HOM05D000748 ORTHO05D000394 1.4e-14 83.6 122 41.0
A10p02200 Brassica napus HOM05D000748 ORTHO05D000394 1.4e-14 83.6 122 41.0
Migut.L00950 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.4e-14 83.6 136 36.0
Gohir.D09G219300 Gossypium hirsutum HOM05D000748 ORTHO05D000394 1.4e-14 83.6 121 43.0
Carub.0001s0280 Capsella rubella HOM05D000748 ORTHO05D000394 1.8e-14 83.2 119 39.5
MD09G1247600 Malus domestica HOM05D000748 ORTHO05D000394 1.8e-14 83.2 137 35.8
QL08p038716 Quercus lobata HOM05D000748 ORTHO05D000394 1.8e-14 83.2 136 38.2
Sp1g02580 Schrenkiella parvula HOM05D000748 ORTHO05D000394 1.8e-14 83.2 122 41.0
COL.COLO4_31477 Corchorus olitorius HOM05D003185 ORTHO05D009915 2.3e-14 82.8 140 35.7
Duzib235G0591 Durio zibethinus HOM05D000748 ORTHO05D000394 2.3e-14 82.8 132 37.9
Manes.12G089370 Manihot esculenta HOM05D000748 ORTHO05D000394 3.0e-14 82.4 121 38.8
Thhalv10009824m.g Eutrema salsugineum HOM05D000748 ORTHO05D000394 3.9e-14 82.0 122 39.3
Hma1.2p1_0785F.1_g217550 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 5.2e-14 81.6 138 35.5
Thecc.06G188200 Theobroma cacao HOM05D000748 ORTHO05D000394 5.2e-14 81.6 139 36.0
Dinv23641 Davidia involucrata HOM05D000748 ORTHO05D000394 6.7e-14 81.3 136 36.0
EL10Ac8g20380 Beta vulgaris HOM05D000748 ORTHO05D000394 8.8e-14 80.9 117 39.3
Gorai.006G240300 Gossypium raimondii HOM05D000748 ORTHO05D000394 8.8e-14 80.9 120 42.5
Thecc.02G179400 Theobroma cacao HOM05D000748 ORTHO05D000394 8.8e-14 80.9 121 39.7
TWI36G1695 Tripterygium wilfordii HOM05D000748 ORTHO05D000394 8.8e-14 80.9 136 37.5
QL04p021564 Quercus lobata HOM05D000748 ORTHO05D000394 1.1e-13 80.5 132 31.1
Actinidia11035 Actinidia chinensis HOM05D000748 ORTHO05D000394 1.5e-13 80.1 136 33.1
Prupe.4G046800 Prunus persica HOM05D000748 ORTHO05D000394 2.6e-13 79.3 139 34.5
TPR.G27502 Trifolium pratense HOM05D000748 ORTHO05D000394 2.6e-13 79.3 121 38.8
TAR624G1116 Trochodendron aralioides HOM05D000748 ORTHO05D000394 2.6e-13 79.3 120 38.3
CANSAT80G2769 Cannabis sativa HOM05D000748 ORTHO05D000394 3.3e-13 79.0 137 35.8
Psat7g189720 Pisum sativum HOM05D000748 ORTHO05D000394 3.3e-13 79.0 123 35.8
Prupe.3G137700 Prunus persica HOM05D000748 ORTHO05D000394 3.3e-13 79.0 136 33.8
Lj1A1206T66 Lonicera japonica HOM05D000748 ORTHO05D000394 5.7e-13 78.2 122 38.5
TPR.G24161 Trifolium pratense HOM05D000748 ORTHO05D000394 5.7e-13 78.2 107 42.1
arahy.Tifrunner.gnm1.ann1.UQN5NZ Arachis hypogaea HOM05D000748 ORTHO05D000394 7.4e-13 77.8 136 33.8
Aa31LG5G2920 Aethionema arabicum HOM05D000748 ORTHO05D000394 9.7e-13 77.4 118 40.7
COL.COLO4_30183 Corchorus olitorius HOM05D000748 ORTHO05D000394 9.7e-13 77.4 121 38.0
Lj4g0017866 Lotus japonicus HOM05D000748 ORTHO05D000394 9.7e-13 77.4 130 36.2
Duzib106G1717 Durio zibethinus HOM05D000748 ORTHO05D000394 1.3e-12 77.0 121 38.8
Migut.L00951 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.3e-12 77.0 87 43.7
Hma1.2p1_0126F.1_g059420 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 1.3e-12 77.0 136 34.6
Actinidia07583 Actinidia chinensis HOM05D000748 ORTHO05D000394 1.7e-12 76.6 134 35.1
arahy.Tifrunner.gnm1.ann1.BEAG7X Arachis hypogaea HOM05D000748 ORTHO05D000394 2.2e-12 76.3 136 33.8
Peaxi162Scf00059g01920 Petunia axillaris HOM05D000748 ORTHO05D000394 2.8e-12 75.9 132 34.1
BraA10t42488Z Brassica rapa HOM05D000748 ORTHO05D000394 3.7e-12 75.5 133 37.6
Haze_13159 Corylus avellana HOM05D000748 ORTHO05D000394 3.7e-12 75.5 137 34.3
CiPaw.03G177000 Carya illinoinensis HOM05D000748 ORTHO05D000394 4.8e-12 75.1 130 35.4
Lj3g0007355 Lotus japonicus HOM05D000748 ORTHO05D000394 4.8e-12 75.1 136 33.1
Lalb_Chr03g0029451 Lupinus albus HOM05D000748 ORTHO05D000394 4.8e-12 75.1 136 34.6
Potri.013G131700 Populus trichocarpa HOM05D000748 ORTHO05D000394 4.8e-12 75.1 122 33.6
Sabra19G0110700 Salix brachista HOM05D000748 ORTHO05D000394 4.8e-12 75.1 114 35.1
Sabra19G0112100 Salix brachista HOM05D000748 ORTHO05D000394 4.8e-12 75.1 114 35.1
MBI07_g12790_MAGBIO Magnolia biondii HOM05D000748 ORTHO05D000394 6.3e-12 74.7 136 32.4
MBI07_g32534_MAGBIO Magnolia biondii HOM05D000748 ORTHO05D000394 6.3e-12 74.7 136 32.4
Eucgr.K01023 Eucalyptus grandis HOM05D000748 ORTHO05D000394 8.2e-12 74.3 119 37.8
MD10G1295200 Malus domestica HOM05D000748 ORTHO05D000394 8.2e-12 74.3 123 37.4
Sc12g0003060 Simmondsia chinensis HOM05D000748 ORTHO05D000394 8.2e-12 74.3 117 37.6
VMungo1127G0579 Vigna mungo HOM05D000748 ORTHO05D000394 8.2e-12 74.3 120 35.0
Sc21g0002840 Simmondsia chinensis HOM05D000748 ORTHO05D000394 1.1e-11 73.9 136 36.0
Cfa014614 Carpinus fangiana HOM05D000748 ORTHO05D000394 1.4e-11 73.6 124 36.3
Dinv40554 Davidia involucrata HOM05D000748 ORTHO05D000394 1.8e-11 73.2 118 38.1
Rhsim06G0142200 Rhododendron simsii HOM05D000748 ORTHO05D000394 1.8e-11 73.2 121 36.4
MD05G1313000 Malus domestica HOM05D000748 ORTHO05D000394 2.4e-11 72.8 139 33.1
Phvul.011G114000 Phaseolus vulgaris HOM05D000748 ORTHO05D000394 2.4e-11 72.8 136 33.1
SalBow1G7555 Salvia bowleyana HOM05D015389 ORTHO05D000394 2.4e-11 72.8 140 35.0
FAN16G1836 Fragaria x ananassa HOM05D000748 ORTHO05D000394 3.1e-11 72.4 136 30.9
Potri.019G100300 Populus trichocarpa HOM05D000748 ORTHO05D000394 3.1e-11 72.4 117 35.9
PGSC0003DMG400029690 Solanum tuberosum HOM05D000748 ORTHO05D000394 3.1e-11 72.4 138 32.6
AUR62014819 Chenopodium quinoa HOM05D000748 ORTHO05D000394 4.1e-11 72.0 119 36.1
FAN21G1875 Fragaria x ananassa HOM05D000748 ORTHO05D000394 4.1e-11 72.0 136 30.9
Peaxi162Scf00661g00521 Petunia axillaris HOM05D000748 ORTHO05D000394 4.1e-11 72.0 138 32.6
Hund21225 Selenicereus undatus HOM05D000748 ORTHO05D000394 4.1e-11 72.0 117 38.5
Glyma.12G113100 Glycine max HOM05D000748 ORTHO05D000394 5.3e-11 71.6 120 34.2
Peaxi162Scf00530g00117 Petunia axillaris HOM05D000748 ORTHO05D000394 5.3e-11 71.6 138 33.3
PGR142G2985 Punica granatum HOM05D000748 ORTHO05D000394 5.3e-11 71.6 135 33.3
TWI63G0527 Tripterygium wilfordii HOM05D000748 ORTHO05D000394 5.3e-11 71.6 139 33.1
VMungo0251G0082 Vigna mungo HOM05D000748 ORTHO05D000394 5.3e-11 71.6 136 31.6
MBI07_g32647_MAGBIO Magnolia biondii HOM05D000748 ORTHO05D000394 7.0e-11 71.2 106 37.7
RcHm_v2.0_Chr5g0008311 Rosa chinensis HOM05D000748 ORTHO05D000394 7.0e-11 71.2 138 30.4
Sopen02g023110 Solanum pennellii HOM05D000748 ORTHO05D000394 7.0e-11 71.2 138 32.6
vmacro15905 Vaccinium macrocarpon HOM05D000748 ORTHO05D000394 7.0e-11 71.2 134 30.6
Nn1g06561 Nelumbo nucifera HOM05D000748 ORTHO05D000394 1.2e-10 70.5 109 33.0
SGA_v2.0_scaffold159G37643 Striga asiatica HOM05D000748 ORTHO05D000394 1.2e-10 70.5 123 32.5
AUR62017014 Chenopodium quinoa HOM05D000748 ORTHO05D000394 1.6e-10 70.1 118 35.6
FvH4_3g09260 Fragaria vesca HOM05D000748 ORTHO05D000394 1.6e-10 70.1 136 29.4
Gohir.A05G161800 Gossypium hirsutum HOM05D000748 ORTHO05D000394 1.6e-10 70.1 131 33.6
MSTRG.15887 Avicennia marina HOM05D000748 ORTHO05D000394 2.0e-10 69.7 136 30.1
Lsat_1_v5_gn_7_21240 Lactuca sativa HOM05D000748 ORTHO05D000394 2.0e-10 69.7 138 33.3
Nitab4.5_0003432g0060 Nicotiana tabacum HOM05D000748 ORTHO05D000394 2.0e-10 69.7 138 33.3
Oeu053972.1 Olea europaea HOM05D000748 ORTHO05D000394 2.0e-10 69.7 123 35.0
Glyma.14G196000 Glycine max HOM05D000748 ORTHO05D000394 2.6e-10 69.3 121 31.4
Manes.16G027200 Manihot esculenta HOM05D000748 ORTHO05D000394 2.6e-10 69.3 123 35.0
Nitab4.5_0010762g0030 Nicotiana tabacum HOM05D000748 ORTHO05D000394 2.6e-10 69.3 138 32.6
DCAR_028069 Daucus carota HOM05D000748 ORTHO05D000394 3.5e-10 68.9 133 33.1
Gorai.009G169800 Gossypium raimondii HOM05D000748 ORTHO05D000394 3.5e-10 68.9 131 33.6
Solyc08g048315.1 Solanum lycopersicum HOM05D000748 ORTHO05D000394 3.5e-10 68.9 106 33.0
Gohir.D05G164600 Gossypium hirsutum HOM05D000748 ORTHO05D000394 4.5e-10 68.6 131 33.6
PGR004G1146 Punica granatum HOM05D000748 ORTHO05D000394 4.5e-10 68.6 123 35.0
Atru.chr10.1886 Acer truncatum HOM05D000748 ORTHO05D000394 5.9e-10 68.2 140 31.4
Glyma.06G292900 Glycine max HOM05D000748 ORTHO05D000394 5.9e-10 68.2 120 32.5
Lalb_Chr16g0383731 Lupinus albus HOM05D000748 ORTHO05D000394 5.9e-10 68.2 133 32.3
QL05p040228 Quercus lobata HOM05D000748 ORTHO05D000394 5.9e-10 68.2 130 33.1
Sabra13G0111200 Salix brachista HOM05D000748 ORTHO05D000394 5.9e-10 68.2 117 33.3
Solyc02g078250.4 Solanum lycopersicum HOM05D000748 ORTHO05D000394 5.9e-10 68.2 138 31.9
vmacro12302 Vaccinium macrocarpon HOM05D000748 ORTHO05D000394 5.9e-10 68.2 121 33.1
Nn1g04081 Nelumbo nucifera HOM05D000748 ORTHO05D000394 1.0e-09 67.4 123 35.0
Potri.004G043300 Populus trichocarpa HOM05D000748 ORTHO05D000394 1.7e-09 66.6 139 28.8
CSS0009741 Camellia sinensis var. sinensis HOM05D000748 ORTHO05D000394 2.9e-09 65.9 138 34.1
PSO832G2785 Papaver somniferum HOM05D000748 ORTHO05D000394 2.9e-09 65.9 125 36.8
Rhsim02G0129000 Rhododendron simsii HOM05D000748 ORTHO05D000394 2.9e-09 65.9 134 30.6
GSVIVG01020544001 Vitis vinifera HOM05D000748 ORTHO05D000394 2.9e-09 65.9 110 34.5
FAN11G2697 Fragaria x ananassa HOM05D000748 ORTHO05D000394 8.5e-09 64.3 118 28.8
Potri.011G052100 Populus trichocarpa HOM05D000748 ORTHO05D000394 8.5e-09 64.3 139 30.2
CANSAT35G1994 Cannabis sativa HOM05D000748 ORTHO05D000394 1.1e-08 63.9 136 30.1
Phvul.002G234000 Phaseolus vulgaris HOM05D000748 ORTHO05D000394 1.1e-08 63.9 136 29.4
Aqoxy1G02433 Aquilegia oxysepala HOM05D000748 ORTHO05D000394 1.5e-08 63.5 119 31.1
Cc02_g13330 Coffea canephora HOM05D000748 ORTHO05D000394 1.5e-08 63.5 116 34.5
Glyma.07G196300 Glycine max HOM05D000748 ORTHO05D000394 1.9e-08 63.2 128 29.7
Dinv26417 Davidia involucrata HOM05D000748 ORTHO05D000394 2.5e-08 62.8 88 39.8
Hma1.2p1_0002F.1_g001860 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 2.5e-08 62.8 108 35.2
Hma1.2p1_0002F.1_g001870 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 2.5e-08 62.8 108 35.2
Hma1.2p1_1201F.1_g266543 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 2.5e-08 62.8 108 35.2
Sabra11G0035800 Salix brachista HOM05D000748 ORTHO05D000394 2.5e-08 62.8 131 28.2
Migut.H01488 Erythranthe guttata HOM05D000748 ORTHO05D000394 4.2e-08 62.0 123 28.5
HanXRQChr04g0124291 Helianthus annuus HOM05D000748 ORTHO05D000394 4.2e-08 62.0 138 30.4
CiPaw.10G048100 Carya illinoinensis HOM05D000748 ORTHO05D000394 5.5e-08 61.6 112 33.9
DCAR_013008 Daucus carota HOM05D003471 ORTHO05D004079 9.4e-08 60.8 106 34.9
SalBow7G2481 Salvia bowleyana HOM05D000748 ORTHO05D000394 1.2e-07 60.5 125 32.8
Thecc.09G087200 Theobroma cacao HOM05D000748 ORTHO05D000394 1.2e-07 60.5 116 32.8
Migut.M01144 Erythranthe guttata HOM05D000748 ORTHO05D000394 3.6e-07 58.9 123 28.5
arahy.Tifrunner.gnm1.ann1.KKMV3J Arachis hypogaea HOM05D000748 ORTHO05D000394 8.8e-06 54.3 136 29.4
BcaC04g23965 Brassica carinata HOM05D000748 ORTHO05D000394 8.8e-06 54.3 72 38.9


User provided reference genes

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