Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 0.0e+00 1245.7 658 100.0
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 7.6e-310 1066.6 637 89.2
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 1.8e-231 806.2 670 63.1
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 5.4e-223 778.1 671 61.0
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 2.6e-217 759.2 521 72.4
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 4.4e-201 705.3 674 56.5
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 5.8e-201 704.9 674 56.7
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 7.1e-199 698.0 669 54.9
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 2.7e-198 696.0 633 58.8
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 1.3e-197 693.7 608 60.2
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 3.9e-197 692.2 664 56.2
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 1.9e-196 689.9 679 56.7
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 5.6e-196 688.3 653 56.5
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 1.3e-195 687.2 534 65.4
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 2.1e-195 686.4 562 62.6
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 4.8e-195 685.3 552 63.9
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 8.1e-195 684.5 678 55.5
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 1.4e-194 683.7 562 62.6
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 1.4e-194 683.7 556 62.4
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 1.2e-193 680.6 676 57.0
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 2.6e-193 679.5 664 55.6
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 2.6e-193 679.5 625 58.2
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 3.8e-192 675.6 552 63.4
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 4.9e-192 675.2 660 54.7
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 6.4e-192 674.9 679 55.1
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 3.2e-191 672.5 682 54.4
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 6.0e-190 668.3 523 64.2
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 7.9e-190 667.9 550 62.4
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 6.6e-189 664.8 545 62.8
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 1.1e-188 664.1 672 55.1
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 2.5e-188 662.9 559 60.5
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 1.3e-187 660.6 614 56.7
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 1.1e-186 657.5 539 62.0
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 2.4e-186 656.4 560 60.0
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 4.0e-186 655.6 616 57.3
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 4.5e-185 652.1 656 53.0
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 2.2e-184 649.8 646 54.2
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 4.9e-184 648.7 670 53.0
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 1.1e-183 647.5 650 53.2
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 1.4e-183 647.1 664 53.9
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 4.2e-183 645.6 654 53.8
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 4.2e-183 645.6 654 53.8
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 5.5e-183 645.2 666 53.9
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.0e-181 641.0 660 53.6
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.3e-181 639.8 525 64.0
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 2.3e-181 639.8 666 52.1
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 3.9e-181 639.0 551 60.1
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.1e-180 637.5 602 56.3
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.5e-180 637.1 602 56.3
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 4.3e-180 635.6 707 50.8
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 5.6e-180 635.2 636 54.1
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.6e-179 633.6 606 55.3
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 8.1e-179 631.3 679 52.9
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 1.1e-178 630.9 661 51.9
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.1e-178 630.9 606 55.1
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 1.1e-178 630.9 672 52.4
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 4.0e-178 629.0 643 53.2
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 5.3e-178 628.6 521 61.2
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 1.2e-177 627.5 675 52.9
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 3.4e-177 625.9 673 52.9
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 5.8e-177 625.2 683 52.9
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 5.8e-177 625.2 522 60.9
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.7e-176 623.6 533 59.7
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 8.4e-176 621.3 682 51.8
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 7.1e-175 618.2 522 59.4
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 1.6e-174 617.1 551 57.4
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 3.5e-174 615.9 672 51.9
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 1.3e-173 614.0 651 51.2
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 1.3e-173 614.0 677 50.7
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 3.0e-173 612.8 683 50.5
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 7.4e-172 608.2 667 50.7
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 3.1e-170 602.8 619 53.5
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 1.3e-168 597.4 650 50.6
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 5.0e-168 595.5 605 53.1
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 9.3e-167 591.3 527 56.4
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 1.2e-166 590.9 499 61.7
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.6e-166 590.5 500 60.0
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 4.3e-164 582.4 535 58.5
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 2.8e-163 579.7 621 50.7
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 4.1e-162 575.9 695 49.2
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.2e-161 574.3 529 56.5
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 1.4e-159 567.4 576 54.7
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 2.5e-159 566.6 665 49.2
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 2.1e-158 563.5 592 51.0
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 2.3e-157 560.1 444 64.9
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 3.9e-157 559.3 663 48.4
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 6.7e-157 558.5 668 47.9
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 3.1e-154 549.7 552 52.0
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 4.1e-154 549.3 544 53.5
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 4.1e-154 549.3 725 44.3
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 4.5e-153 545.8 662 47.9
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 4.5e-153 545.8 626 48.2
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 5.9e-153 545.4 525 54.7
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 7.7e-153 545.0 538 52.0
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.0e-152 544.7 529 53.3
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.1e-151 541.2 552 51.6
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.2e-150 537.7 558 51.3
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 1.6e-150 537.3 666 47.1
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 2.7e-150 536.6 556 50.2
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 4.7e-150 535.8 563 50.1
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 2.0e-148 530.4 447 60.6
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 3.3e-148 529.6 536 50.9
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 7.4e-148 528.5 658 47.7
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 2.2e-147 526.9 658 47.6
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 4.8e-147 525.8 659 47.5
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 5.3e-146 522.3 526 53.6
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 2.0e-145 520.4 659 46.9
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 4.5e-145 519.2 524 53.4
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 1.3e-144 517.7 513 52.0
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 1.7e-144 517.3 524 53.2
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 1.4e-141 507.7 519 49.9
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 8.8e-141 505.0 667 46.9
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 8.2e-139 498.4 629 46.4
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 3.8e-136 489.6 639 43.2
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 6.5e-136 488.8 562 47.9
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 5.2e-133 479.2 547 45.5
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 3.8e-128 463.0 544 46.0
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 7.2e-127 458.8 428 54.2
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 6.6e-120 435.6 615 41.8
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 7.3e-111 405.6 563 41.2
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 5.8e-108 396.0 637 42.1
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 1.4e-106 391.3 565 40.2
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 2.8e-86 323.9 479 38.4
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 1.2e-84 318.5 268 57.5
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 1.2e-84 318.5 399 47.1
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 2.0e-84 317.8 537 36.9
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 3.4e-84 317.0 566 34.6
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 1.0e-80 305.4 236 58.9
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.0e-80 305.4 548 35.0
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 5.1e-80 303.1 416 41.1
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 2.1e-78 297.7 319 48.6
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 1.8e-69 268.1 217 63.6
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 2.4e-53 214.5 251 48.6
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 2.8e-46 191.0 125 70.4
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 6.8e-08 63.5 140 35.0
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 2.2e-06 58.5 106 30.2


User provided reference genes

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